RNA–Protein interactions for RNA: ENST00000497638.2

VPS45-210, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,135 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-210ENST00000497638 CELF3Q5SZQ8 465 aaKnown RBP8.8□□□□□ -1
VPS45-210ENST00000497638 ARHGEF16Q5VV41 709 aa8.8□□□□□ -1
VPS45-210ENST00000497638 SV2BQ7L1I2 683 aa8.8□□□□□ -1
VPS45-210ENST00000497638 CYFIP1Q7L576 1253 aa8.8□□□□□ -1
VPS45-210ENST00000497638 SIRT2Q8IXJ6 389 aa8.8□□□□□ -1
VPS45-210ENST00000497638 CMTR2Q8IYT2 770 aaKnown RBP8.8□□□□□ -1
VPS45-210ENST00000497638 MFSD4AQ8N468 514 aa8.8□□□□□ -1
VPS45-210ENST00000497638 TMEM105Q8N8V8 129 aa8.8□□□□□ -1
VPS45-210ENST00000497638 MFSD2AQ8NA29 543 aa8.8□□□□□ -1
VPS45-210ENST00000497638 SPPL3Q8TCT6 385 aa8.8□□□□□ -1
VPS45-210ENST00000497638 ZNF689Q96CS4 500 aaPredicted RBP8.8□□□□□ -1
VPS45-210ENST00000497638 CDCA3Q99618 268 aaPredicted RBP8.8□□□□□ -1
VPS45-210ENST00000497638 TMEM47Q9BQJ4 181 aa8.8□□□□□ -1
VPS45-210ENST00000497638 C16orf70Q9BSU1 422 aa8.8□□□□□ -1
VPS45-210ENST00000497638 LRRCC1Q9C099 1032 aa8.8□□□□□ -1
VPS45-210ENST00000497638 COL20A1Q9P218 1284 aa8.8□□□□□ -1
VPS45-210ENST00000497638 SPTBN2O15020 2390 aa8.8□□□□□ -1
VPS45-210ENST00000497638 CCDC171Q6TFL3 1326 aa8.8□□□□□ -1
VPS45-210ENST00000497638 OTOGLQ3ZCN5 2332 aa8.79□□□□□ -1
VPS45-210ENST00000497638 MED19A0JLT2 244 aaPredicted RBP8.79□□□□□ -1
VPS45-210ENST00000497638 ZNF503-AS2A6NEH8 195 aa8.79□□□□□ -1
VPS45-210ENST00000497638 DGKIO75912 1065 aa8.79□□□□□ -1
VPS45-210ENST00000497638 GGPS1O95749 300 aa8.79□□□□□ -1
VPS45-210ENST00000497638 SNHG28P0DPA3 235 aa8.79□□□□□ -1
VPS45-210ENST00000497638 DNAJB1P25685 340 aa8.79□□□□□ -1
VPS45-210ENST00000497638 FGD1P98174 961 aa8.79□□□□□ -1
VPS45-210ENST00000497638 SLBPQ14493 270 aaKnown RBP eCLIP8.79□□□□□ -1
VPS45-210ENST00000497638 HSDL1Q3SXM5 330 aa8.79□□□□□ -1
VPS45-210ENST00000497638 WIPI1Q5MNZ9 446 aaPredicted RBP8.79□□□□□ -1
VPS45-210ENST00000497638 GPATCH4Q5T3I0 446 aaKnown RBP8.79□□□□□ -1
VPS45-210ENST00000497638 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.79□□□□□ -1
VPS45-210ENST00000497638 DGLUCYQ7Z3D6 616 aa8.79□□□□□ -1
VPS45-210ENST00000497638 KREMEN2Q8NCW0 462 aa8.79□□□□□ -1
VPS45-210ENST00000497638 ATP8B4Q8TF62 1192 aa8.79□□□□□ -1
VPS45-210ENST00000497638 POF1BQ8WVV4 589 aa8.79□□□□□ -1
VPS45-210ENST00000497638 NEK1Q96PY6 1258 aa8.79□□□□□ -1
VPS45-210ENST00000497638 RNPEPQ9H4A4 650 aa8.79□□□□□ -1
VPS45-210ENST00000497638 TLE6Q9H808 572 aa8.79□□□□□ -1
VPS45-210ENST00000497638 ATP13A1Q9HD20 1204 aa8.79□□□□□ -1
VPS45-210ENST00000497638 PXMP2Q9NR77 195 aa8.79□□□□□ -1
VPS45-210ENST00000497638 TCP11L1Q9NUJ3 509 aa8.79□□□□□ -1
VPS45-210ENST00000497638 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.79□□□□□ -1
VPS45-210ENST00000497638 ANAPC4Q9UJX5 808 aa8.79□□□□□ -1
VPS45-210ENST00000497638 SORCS3Q9UPU3 1222 aa8.79□□□□□ -1
VPS45-210ENST00000497638 MRPL42Q9Y6G3 142 aaKnown RBP8.79□□□□□ -1
VPS45-210ENST00000497638 KIAA1671Q9BY89 1806 aa8.79□□□□□ -1
VPS45-210ENST00000497638 MYO10Q9HD67 2058 aa8.79□□□□□ -1
VPS45-210ENST00000497638 KAT6AQ92794 2004 aa8.78□□□□□ -1
VPS45-210ENST00000497638 H3BS24 57 aa8.78□□□□□ -1
VPS45-210ENST00000497638 LGALS2P05162 132 aa8.78□□□□□ -1
VPS45-210ENST00000497638 FGRP09769 529 aa8.78□□□□□ -1
VPS45-210ENST00000497638 TGFB3P10600 412 aa8.78□□□□□ -1
VPS45-210ENST00000497638 HSPD1P10809 573 aaKnown RBP8.78□□□□□ -1
VPS45-210ENST00000497638 GHRP10912 638 aa8.78□□□□□ -1
VPS45-210ENST00000497638 UBA1P22314 1058 aaKnown RBP8.78□□□□□ -1
VPS45-210ENST00000497638 UBE3AQ05086 875 aa8.78□□□□□ -1
VPS45-210ENST00000497638 CDC37Q16543 378 aaPredicted RBP8.78□□□□□ -1
VPS45-210ENST00000497638 NKG7Q16617 165 aa8.78□□□□□ -1
VPS45-210ENST00000497638 MPZL3Q6UWV2 235 aa8.78□□□□□ -1
VPS45-210ENST00000497638 RBM23Q86U06 439 aaKnown RBP8.78□□□□□ -1
VPS45-210ENST00000497638 NPAS4Q8IUM7 802 aa8.78□□□□□ -1
VPS45-210ENST00000497638 HID1Q8IV36 788 aa8.78□□□□□ -1
VPS45-210ENST00000497638 PANK1Q8TE04 598 aa8.78□□□□□ -1
VPS45-210ENST00000497638 TBC1D5Q92609 795 aa8.78□□□□□ -1
VPS45-210ENST00000497638 LIN37Q96GY3 246 aaPredicted RBP8.78□□□□□ -1
VPS45-210ENST00000497638 EHMT1Q9H9B1 1298 aa8.78□□□□□ -1
VPS45-210ENST00000497638 SEMA3GQ9NS98 782 aa8.78□□□□□ -1
VPS45-210ENST00000497638 MRPL11Q9Y3B7 192 aaKnown RBP8.78□□□□□ -1
VPS45-210ENST00000497638 NR2E1Q9Y466 385 aa8.78□□□□□ -1
VPS45-210ENST00000497638 ENPP3O14638 875 aa8.77□□□□□ -1.01
VPS45-210ENST00000497638 CBX7O95931 251 aa8.77□□□□□ -1.01
VPS45-210ENST00000497638 CHRNA1P02708 482 aa8.77□□□□□ -1.01
VPS45-210ENST00000497638 P4HBP07237 508 aaKnown RBP8.77□□□□□ -1.01
VPS45-210ENST00000497638 CLCN5P51795 746 aa8.77□□□□□ -1.01
VPS45-210ENST00000497638 GHRHRQ02643 423 aa8.77□□□□□ -1.01
VPS45-210ENST00000497638 MESP2Q0VG99 397 aa8.77□□□□□ -1.01
VPS45-210ENST00000497638 DUSP6Q16828 381 aa8.77□□□□□ -1.01
VPS45-210ENST00000497638 FYB2Q5VWT5 728 aa8.77□□□□□ -1.01
VPS45-210ENST00000497638 ZNF746Q6NUN9 644 aaPredicted RBP8.77□□□□□ -1.01
VPS45-210ENST00000497638 LETMD1Q6P1Q0 360 aa8.77□□□□□ -1.01
VPS45-210ENST00000497638 TAF2Q6P1X5 1199 aa8.77□□□□□ -1.01
VPS45-210ENST00000497638 TMEM184AQ6ZMB5 413 aa8.77□□□□□ -1.01
VPS45-210ENST00000497638 RIN3Q8TB24 985 aa8.77□□□□□ -1.01
VPS45-210ENST00000497638 GAL3ST3Q96A11 431 aa8.77□□□□□ -1.01
VPS45-210ENST00000497638 RMDN1Q96DB5 314 aa8.77□□□□□ -1.01
VPS45-210ENST00000497638 KIRREL1Q96J84 757 aa8.77□□□□□ -1.01
VPS45-210ENST00000497638 TTC14Q96N46 770 aa8.77□□□□□ -1.01
VPS45-210ENST00000497638 FRMD6Q96NE9 622 aa8.77□□□□□ -1.01
VPS45-210ENST00000497638 SEC62Q99442 399 aaKnown RBP8.77□□□□□ -1.01
VPS45-210ENST00000497638 SEMA4AQ9H3S1 761 aa8.77□□□□□ -1.01
VPS45-210ENST00000497638 MFSD1Q9H3U5 465 aa8.77□□□□□ -1.01
VPS45-210ENST00000497638 MLXIPQ9HAP2 919 aa8.77□□□□□ -1.01
VPS45-210ENST00000497638 TOMM22Q9NS69 142 aa8.77□□□□□ -1.01
VPS45-210ENST00000497638 ZBTB40Q9NUA8 1239 aa8.77□□□□□ -1.01
VPS45-210ENST00000497638 SETD4Q9NVD3 440 aa8.77□□□□□ -1.01
VPS45-210ENST00000497638 ZNF215Q9UL58 517 aaPredicted RBP8.77□□□□□ -1.01
VPS45-210ENST00000497638 DDX19BQ9UMR2 479 aa8.77□□□□□ -1.01
VPS45-210ENST00000497638 MYH6P13533 1939 aa8.77□□□□□ -1.01
VPS45-210ENST00000497638 CHD8Q9HCK8 2581 aa8.76□□□□□ -1.01
VPS45-210ENST00000497638 DNAH14Q0VDD8 3507 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms