RNA–Protein interactions for RNA: ENST00000497377.5

HLA-B-254, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 917 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-254ENST00000497377 KANK3Q6NY19 840 aa12.5□□□□□ -0.41
HLA-B-254ENST00000497377 TMEM173Q86WV6 379 aaPredicted RBP12.5□□□□□ -0.41
HLA-B-254ENST00000497377 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.5□□□□□ -0.41
HLA-B-254ENST00000497377 CD302Q8IX05 232 aa12.5□□□□□ -0.41
HLA-B-254ENST00000497377 SYCP3Q8IZU3 236 aa12.5□□□□□ -0.41
HLA-B-254ENST00000497377 VPS52Q8N1B4 723 aa12.5□□□□□ -0.41
HLA-B-254ENST00000497377 PABPC5Q96DU9 382 aaKnown RBP12.5□□□□□ -0.41
HLA-B-254ENST00000497377 PAGE5Q96GU1 130 aa12.5□□□□□ -0.41
HLA-B-254ENST00000497377 PPP1R10Q96QC0 940 aaKnown RBP12.5□□□□□ -0.41
HLA-B-254ENST00000497377 MSTO1Q9BUK6 570 aa12.5□□□□□ -0.41
HLA-B-254ENST00000497377 HAPLN2Q9GZV7 340 aa12.5□□□□□ -0.41
HLA-B-254ENST00000497377 SSX2IPQ9Y2D8 614 aa12.5□□□□□ -0.41
HLA-B-254ENST00000497377 UBE4BO95155 1302 aa12.5□□□□□ -0.41
HLA-B-254ENST00000497377 PDCD11Q14690 1871 aaKnown RBP12.49□□□□□ -0.41
HLA-B-254ENST00000497377 SMIM28A0A1B0GU29 152 aa12.49□□□□□ -0.41
HLA-B-254ENST00000497377 KIAA0391O15091 583 aaKnown RBP12.49□□□□□ -0.41
HLA-B-254ENST00000497377 MYBP10242 640 aa12.49□□□□□ -0.41
HLA-B-254ENST00000497377 CTSAP10619 480 aa12.49□□□□□ -0.41
HLA-B-254ENST00000497377 CASP5P51878 434 aa12.49□□□□□ -0.41
HLA-B-254ENST00000497377 EHHADHQ08426 723 aa12.49□□□□□ -0.41
HLA-B-254ENST00000497377 HYAL1Q12794 435 aa12.49□□□□□ -0.41
HLA-B-254ENST00000497377 PSMD2Q13200 908 aa12.49□□□□□ -0.41
HLA-B-254ENST00000497377 CUL4BQ13620 913 aa12.49□□□□□ -0.41
HLA-B-254ENST00000497377 HSP90AA2PQ14568 343 aaPredicted RBP12.49□□□□□ -0.41
HLA-B-254ENST00000497377 NAB2Q15742 525 aa12.49□□□□□ -0.41
HLA-B-254ENST00000497377 SLC10A6Q3KNW5 377 aa12.49□□□□□ -0.41
HLA-B-254ENST00000497377 SLC39A4Q6P5W5 647 aa12.49□□□□□ -0.41
HLA-B-254ENST00000497377 GPR65Q8IYL9 337 aa12.49□□□□□ -0.41
HLA-B-254ENST00000497377 MRPL43Q8N983 215 aaKnown RBP12.49□□□□□ -0.41
HLA-B-254ENST00000497377 BCL7CQ8WUZ0 217 aaPredicted RBP12.49□□□□□ -0.41
HLA-B-254ENST00000497377 POMGNT1Q8WZA1 660 aa12.49□□□□□ -0.41
HLA-B-254ENST00000497377 CCDC47Q96A33 483 aaKnown RBP12.49□□□□□ -0.41
HLA-B-254ENST00000497377 ZBP1Q9H171 429 aa12.49□□□□□ -0.41
HLA-B-254ENST00000497377 BLZF1Q9H2G9 400 aa12.49□□□□□ -0.41
HLA-B-254ENST00000497377 TLE6Q9H808 572 aa12.49□□□□□ -0.41
HLA-B-254ENST00000497377 RPF1Q9H9Y2 349 aaKnown RBP12.49□□□□□ -0.41
HLA-B-254ENST00000497377 MARCH5Q9NX47 278 aa12.49□□□□□ -0.41
HLA-B-254ENST00000497377 ADAM28Q9UKQ2 775 aa12.49□□□□□ -0.41
HLA-B-254ENST00000497377 AGO2Q9UKV8 859 aaKnown RBP12.49□□□□□ -0.41
HLA-B-254ENST00000497377 PRG3Q9Y2Y8 225 aaPredicted RBP12.49□□□□□ -0.41
HLA-B-254ENST00000497377 IRAK3Q9Y616 596 aa12.49□□□□□ -0.41
HLA-B-254ENST00000497377 SF3B1O75533 1304 aaKnown RBP eCLIP12.48□□□□□ -0.41
HLA-B-254ENST00000497377 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.48□□□□□ -0.41
HLA-B-254ENST00000497377 TTC26A0AVF1 554 aa12.48□□□□□ -0.41
HLA-B-254ENST00000497377 ANKRD63C9JTQ0 380 aa12.48□□□□□ -0.41
HLA-B-254ENST00000497377 TMEM189-UBE2V1I3L0A0 370 aa12.48□□□□□ -0.41
HLA-B-254ENST00000497377 XPOTO43592 962 aaKnown RBP12.48□□□□□ -0.41
HLA-B-254ENST00000497377 FAM189A1O60320 539 aa12.48□□□□□ -0.41
HLA-B-254ENST00000497377 TADA2AO75478 443 aa12.48□□□□□ -0.41
HLA-B-254ENST00000497377 ZNF202O95125 648 aa12.48□□□□□ -0.41
HLA-B-254ENST00000497377 CXCL14O95715 111 aa12.48□□□□□ -0.41
HLA-B-254ENST00000497377 EFEMP2O95967 443 aa12.48□□□□□ -0.41
HLA-B-254ENST00000497377 LDHAP00338 332 aaKnown RBP12.48□□□□□ -0.41
HLA-B-254ENST00000497377 SOD2P04179 222 aa12.48□□□□□ -0.41
HLA-B-254ENST00000497377 ADRB2P07550 413 aa12.48□□□□□ -0.41
HLA-B-254ENST00000497377 GARTP22102 1010 aa12.48□□□□□ -0.41
HLA-B-254ENST00000497377 SNRPFP62306 86 aaKnown RBP12.48□□□□□ -0.41
HLA-B-254ENST00000497377 MRPS5P82675 430 aaKnown RBP12.48□□□□□ -0.41
HLA-B-254ENST00000497377 PPP2R3AQ06190 1150 aa12.48□□□□□ -0.41
HLA-B-254ENST00000497377 ELAVL2Q12926 359 aaKnown RBP12.48□□□□□ -0.41
HLA-B-254ENST00000497377 DUSP6Q16828 381 aa12.48□□□□□ -0.41
HLA-B-254ENST00000497377 CTC1Q2NKJ3 1217 aa12.48□□□□□ -0.41
HLA-B-254ENST00000497377 PLPP4Q5VZY2 271 aa12.48□□□□□ -0.41
HLA-B-254ENST00000497377 KRBA2Q6ZNG9 492 aa12.48□□□□□ -0.41
HLA-B-254ENST00000497377 EPM2AIP1Q7L775 607 aaPredicted RBP12.48□□□□□ -0.41
HLA-B-254ENST00000497377 RNF168Q8IYW5 571 aaPredicted RBP12.48□□□□□ -0.41
HLA-B-254ENST00000497377 EFHBQ8N7U6 833 aa12.48□□□□□ -0.41
HLA-B-254ENST00000497377 ZNF507Q8TCN5 953 aa12.48□□□□□ -0.41
HLA-B-254ENST00000497377 HERC2P3Q9BVR0 1158 aa12.48□□□□□ -0.41
HLA-B-254ENST00000497377 GOLPH3LQ9H4A5 285 aa12.48□□□□□ -0.41
HLA-B-254ENST00000497377 UBE2ZQ9H832 354 aaPredicted RBP12.48□□□□□ -0.41
HLA-B-254ENST00000497377 EXOC1Q9NV70 894 aa12.48□□□□□ -0.41
HLA-B-254ENST00000497377 CPSF3Q9UKF6 684 aaKnown RBP12.48□□□□□ -0.41
HLA-B-254ENST00000497377 UNC80Q8N2C7 3258 aa12.48□□□□□ -0.41
HLA-B-254ENST00000497377 BRWD1Q9NSI6 2320 aa12.48□□□□□ -0.41
HLA-B-254ENST00000497377 C2orf71A6NGG8 1288 aa12.47□□□□□ -0.41
HLA-B-254ENST00000497377 CASTOR2A6NHX0 329 aa12.47□□□□□ -0.41
HLA-B-254ENST00000497377 HRO43593 1189 aa12.47□□□□□ -0.41
HLA-B-254ENST00000497377 PRPF6O94906 941 aaKnown RBP12.47□□□□□ -0.41
HLA-B-254ENST00000497377 CSPG5O95196 566 aa12.47□□□□□ -0.41
HLA-B-254ENST00000497377 URODP06132 367 aa12.47□□□□□ -0.41
HLA-B-254ENST00000497377 SRGAP2BP0DMP2 458 aa12.47□□□□□ -0.41
HLA-B-254ENST00000497377 CXCL8P10145 99 aa12.47□□□□□ -0.41
HLA-B-254ENST00000497377 ADSSP30520 456 aa12.47□□□□□ -0.41
HLA-B-254ENST00000497377 RPL9P32969 192 aaKnown RBP12.47□□□□□ -0.41
HLA-B-254ENST00000497377 NRIP1P48552 1158 aa12.47□□□□□ -0.41
HLA-B-254ENST00000497377 KCNA1Q09470 495 aa12.47□□□□□ -0.41
HLA-B-254ENST00000497377 ENOX2Q16206 610 aaKnown RBP12.47□□□□□ -0.41
HLA-B-254ENST00000497377 GLRA4Q5JXX5 417 aa12.47□□□□□ -0.41
HLA-B-254ENST00000497377 FUT10Q6P4F1 479 aa12.47□□□□□ -0.41
HLA-B-254ENST00000497377 DCLRE1AQ6PJP8 1040 aa12.47□□□□□ -0.41
HLA-B-254ENST00000497377 ADGRD2Q7Z7M1 963 aa12.47□□□□□ -0.41
HLA-B-254ENST00000497377 GRAMD1CQ8IYS0 662 aa12.47□□□□□ -0.41
HLA-B-254ENST00000497377 FMR1NBQ8N0W7 255 aaPredicted RBP12.47□□□□□ -0.41
HLA-B-254ENST00000497377 TMEM87AQ8NBN3 555 aa12.47□□□□□ -0.41
HLA-B-254ENST00000497377 ZMAT2Q96NC0 199 aaKnown RBP12.47□□□□□ -0.41
HLA-B-254ENST00000497377 VN1R3Q9BXE9 311 aa12.47□□□□□ -0.41
HLA-B-254ENST00000497377 FGFBP2Q9BYJ0 223 aa12.47□□□□□ -0.41
HLA-B-254ENST00000497377 CXCL16Q9H2A7 254 aa12.47□□□□□ -0.41
HLA-B-254ENST00000497377 ASB7Q9H672 318 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms