RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 FAM95CA0A1B0GW59 222 aa2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 A0A1W2PQ45 241 aaPredicted RBP2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 A0A1W2PQY0 241 aa2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 PRSS38A1L453 326 aa2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 GOLGA6L3A6NEY3 463 aa2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 FADS2P1A8MWK0 482 aa2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 H0YIN7 160 aa2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 J3KRW8 73 aa2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 M0R3H8 397 aa2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 POLRMTO00411 1230 aaKnown RBP2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 BUB1BO60566 1050 aaPredicted RBP2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 MAFKO60675 156 aa2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 PQBP1O60828 265 aaKnown RBP2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 LEFTY1O75610 366 aa2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 RNASEH2AO75792 299 aaKnown RBP2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 DGKIO75912 1065 aa2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 ARHGEF15O94989 841 aa2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 DDX58O95786 925 aaKnown RBP2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 PRLP01236 227 aa2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 SYPP08247 313 aa2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 GSTM1P09488 218 aa2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 GNAT1P11488 350 aa2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 FUT4P22083 530 aa2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 TNFSF4P23510 183 aa2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 MAP4P27816 1152 aaKnown RBP2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 TM4SF1P30408 202 aa2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 MCAMP43121 646 aa2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 PPM1FP49593 454 aaPredicted RBP2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 HK3P52790 923 aa2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 ARL4CP56559 192 aa2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 GEMIN4P57678 1058 aaKnown RBP2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 IRX6P78412 446 aaPredicted RBP2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 CAP1Q01518 475 aa2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 POU5F1Q01860 360 aaKnown RBP2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 DUSP4Q13115 394 aa2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 CDK5R2Q13319 367 aa2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 CNGB1Q14028 1251 aaPredicted RBP2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 ADGRE1Q14246 886 aa2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 ADRM1Q16186 407 aa2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 SGO2Q562F6 1265 aa2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 THEMIS2Q5TEJ8 643 aa2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 ZNF280DQ6N043 979 aa2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 KIAA1841Q6NSI8 718 aa2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 KLHDC10Q6PID8 442 aa2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 DLK2Q6UY11 383 aa2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 RFX8Q6ZV50 586 aa2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 ZAR1Q86SH2 424 aa2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 SLCO6A1Q86UG4 719 aa2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 C2CD5Q86YS7 1000 aa2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 RASAL3Q86YV0 1011 aa2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 CLEC10AQ8IUN9 316 aa2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 ANKRD18AQ8IVF6 992 aa2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 SPACA3Q8IXA5 215 aa2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 LZTR1Q8N653 840 aa2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 PAF1Q8N7H5 531 aa2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 TRAPPC12Q8WVT3 735 aa2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 LINC01599Q8WXQ3 324 aa2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 FATE1Q969F0 183 aa2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 EAF2Q96CJ1 260 aaPredicted RBP2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 ASIC4Q96FT7 647 aa2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 CDK5RAP3Q96JB5 506 aa2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 CGRRF1Q99675 332 aa2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 FAM83CQ9BQN1 747 aa2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 DPH1Q9BZG8 443 aa2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 LRRC27Q9C0I9 530 aa2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 OSBPL5Q9H0X9 879 aaPredicted RBP2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 MYLK2Q9H1R3 596 aa2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 SEMA4AQ9H3S1 761 aa2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 IFT122Q9HBG6 1241 aa2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 ADARB2Q9NS39 739 aaKnown RBP2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 AP5S1Q9NUS5 200 aa2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 RTEL1Q9NZ71 1219 aa2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 BTBD7Q9P203 1132 aa2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 ZMYND8Q9ULU4 1186 aaPredicted RBP2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 LIMCH1Q9UPQ0 1083 aa2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 LRCH1Q9Y2L9 728 aa2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 TELO2Q9Y4R8 837 aa2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 CDY2AQ9Y6F7 541 aa2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 CEP295Q9C0D2 2601 aa2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 UBR5O95071 2799 aaPredicted RBP2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 ZNF609O15014 1411 aa2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 NOTCH2Q04721 2471 aa2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 LCHNA4D1U4 455 aa2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 FAM90A27PA6NNH2 459 aa2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 CLCA1A8K7I4 914 aa2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 C9orf172C9J069 976 aa2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 KRIT1O00522 736 aa2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 AREL1O15033 823 aa2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 FOXP2O15409 715 aa2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 MGEA5O60502 916 aa2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 PLA2G6O60733 806 aa2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 SEC24DO94855 1032 aaPredicted RBP2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 FARP2O94887 1054 aaPredicted RBP2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 RHOBTB3O94955 611 aa2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 ARIH2O95376 493 aa2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 ESR1P03372 595 aa2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 CSTBP04080 98 aaKnown RBP2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 FAM87AP0C7U9 286 aa2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 SPATA31C1P0DKV0 1188 aa2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 PTPN1P18031 435 aaKnown RBP2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms