RNA–Protein interactions for RNA: ENST00000497311.5

SMC4-226, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-226ENST00000497311 GUCY2CP25092 1073 aa18.8■□□□□ 0.6
SMC4-226ENST00000497311 GJB2P29033 226 aa18.8■□□□□ 0.6
SMC4-226ENST00000497311 HOXA9P31269 272 aa18.8■□□□□ 0.6
SMC4-226ENST00000497311 OR1D2P34982 312 aa18.8■□□□□ 0.6
SMC4-226ENST00000497311 RAB33AQ14088 237 aa18.8■□□□□ 0.6
SMC4-226ENST00000497311 XKR4Q5GH76 650 aa18.8■□□□□ 0.6
SMC4-226ENST00000497311 ALKAL1Q6UXT8 129 aa18.8■□□□□ 0.6
SMC4-226ENST00000497311 KCTD17Q8N5Z5 321 aa18.8■□□□□ 0.6
SMC4-226ENST00000497311 DDX27Q96GQ7 796 aaKnown RBP18.8■□□□□ 0.6
SMC4-226ENST00000497311 RTP3Q9BQQ7 232 aa18.8■□□□□ 0.6
SMC4-226ENST00000497311 SLC38A7Q9NVC3 462 aa18.8■□□□□ 0.6
SMC4-226ENST00000497311 MTRRQ9UBK8 725 aa18.8■□□□□ 0.6
SMC4-226ENST00000497311 ZFP37Q9Y6Q3 630 aaPredicted RBP18.8■□□□□ 0.6
SMC4-226ENST00000497311 DOCK6Q96HP0 2047 aa18.79■□□□□ 0.6
SMC4-226ENST00000497311 SFI1A8K8P3 1242 aa18.79■□□□□ 0.6
SMC4-226ENST00000497311 SLC16A4O15374 487 aa18.79■□□□□ 0.6
SMC4-226ENST00000497311 XYLBO75191 536 aa18.79■□□□□ 0.6
SMC4-226ENST00000497311 MCF2P10911 925 aa18.79■□□□□ 0.6
SMC4-226ENST00000497311 SRFP11831 508 aa18.79■□□□□ 0.6
SMC4-226ENST00000497311 IGFBP6P24592 240 aaPredicted RBP18.79■□□□□ 0.6
SMC4-226ENST00000497311 SMTNP53814 917 aa18.79■□□□□ 0.6
SMC4-226ENST00000497311 UVSSAQ2YD98 709 aa18.79■□□□□ 0.6
SMC4-226ENST00000497311 HYIQ5T013 277 aa18.79■□□□□ 0.6
SMC4-226ENST00000497311 AXDND1Q5T1B0 1012 aaPredicted RBP18.79■□□□□ 0.6
SMC4-226ENST00000497311 MPZL3Q6UWV2 235 aa18.79■□□□□ 0.6
SMC4-226ENST00000497311 CD300LGQ6UXG3 332 aa18.79■□□□□ 0.6
SMC4-226ENST00000497311 ANKS3Q6ZW76 656 aa18.79■□□□□ 0.6
SMC4-226ENST00000497311 ACAP3Q96P50 834 aa18.79■□□□□ 0.6
SMC4-226ENST00000497311 NTPCRQ9BSD7 190 aaKnown RBP18.79■□□□□ 0.6
SMC4-226ENST00000497311 POLIQ9UNA4 740 aa18.79■□□□□ 0.6
SMC4-226ENST00000497311 USP34Q70CQ2 3546 aa18.78■□□□□ 0.6
SMC4-226ENST00000497311 VWA3AA6NCI4 1184 aa18.78■□□□□ 0.6
SMC4-226ENST00000497311 ANHXE9PGG2 379 aa18.78■□□□□ 0.6
SMC4-226ENST00000497311 STK25O00506 426 aa18.78■□□□□ 0.6
SMC4-226ENST00000497311 CCL16O15467 120 aa18.78■□□□□ 0.6
SMC4-226ENST00000497311 PI15O43692 258 aa18.78■□□□□ 0.6
SMC4-226ENST00000497311 PROZP22891 400 aa18.78■□□□□ 0.6
SMC4-226ENST00000497311 TKTP29401 623 aaKnown RBP18.78■□□□□ 0.6
SMC4-226ENST00000497311 BRCC3P46736 316 aa18.78■□□□□ 0.6
SMC4-226ENST00000497311 SOX4Q06945 474 aaPredicted RBP18.78■□□□□ 0.6
SMC4-226ENST00000497311 RAD51AP2Q09MP3 1159 aa18.78■□□□□ 0.6
SMC4-226ENST00000497311 STRN3Q13033 797 aa18.78■□□□□ 0.6
SMC4-226ENST00000497311 SYT2Q8N9I0 419 aaPredicted RBP18.78■□□□□ 0.6
SMC4-226ENST00000497311 C3orf58Q8NDZ4 430 aa18.78■□□□□ 0.6
SMC4-226ENST00000497311 SLC7A14Q8TBB6 771 aa18.78■□□□□ 0.6
SMC4-226ENST00000497311 SPIRE2Q8WWL2 714 aa18.78■□□□□ 0.6
SMC4-226ENST00000497311 CDK5RAP3Q96JB5 506 aa18.78■□□□□ 0.6
SMC4-226ENST00000497311 SNX27Q96L92 541 aa18.78■□□□□ 0.6
SMC4-226ENST00000497311 PNMA5Q96PV4 448 aa18.78■□□□□ 0.6
SMC4-226ENST00000497311 PLIN2Q99541 437 aa18.78■□□□□ 0.6
SMC4-226ENST00000497311 UPF2Q9HAU5 1272 aaKnown RBP18.78■□□□□ 0.6
SMC4-226ENST00000497311 BACE2Q9Y5Z0 518 aa18.78■□□□□ 0.6
SMC4-226ENST00000497311 CDY1Q9Y6F8 540 aa18.78■□□□□ 0.6
SMC4-226ENST00000497311 PODXLO00592 558 aa18.77■□□□□ 0.6
SMC4-226ENST00000497311 ABLIM1O14639 778 aa18.77■□□□□ 0.6
SMC4-226ENST00000497311 GFRA3O60609 400 aa18.77■□□□□ 0.6
SMC4-226ENST00000497311 HARSP12081 509 aaKnown RBP18.77■□□□□ 0.6
SMC4-226ENST00000497311 PLS3P13797 630 aa18.77■□□□□ 0.6
SMC4-226ENST00000497311 RFX1P22670 979 aa18.77■□□□□ 0.6
SMC4-226ENST00000497311 NTHL1P78549 312 aa18.77■□□□□ 0.6
SMC4-226ENST00000497311 HTR4Q13639 388 aa18.77■□□□□ 0.6
SMC4-226ENST00000497311 ARL6IP4Q66PJ3 421 aaKnown RBP18.77■□□□□ 0.6
SMC4-226ENST00000497311 RTL10Q7L3V2 364 aa18.77■□□□□ 0.6
SMC4-226ENST00000497311 ZMAT2Q96NC0 199 aaKnown RBP18.77■□□□□ 0.6
SMC4-226ENST00000497311 KCND2Q9NZV8 630 aa18.77■□□□□ 0.6
SMC4-226ENST00000497311 CNTN3Q9P232 1028 aa18.77■□□□□ 0.6
SMC4-226ENST00000497311 CDH7Q9ULB5 785 aa18.77■□□□□ 0.6
SMC4-226ENST00000497311 CA14Q9ULX7 337 aa18.77■□□□□ 0.6
SMC4-226ENST00000497311 NUMBLQ9Y6R0 609 aa18.77■□□□□ 0.6
SMC4-226ENST00000497311 MYH11P35749 1972 aa18.77■□□□□ 0.59
SMC4-226ENST00000497311 CITO14578 2027 aa18.76■□□□□ 0.59
SMC4-226ENST00000497311 KRBA1A5PL33 1030 aa18.76■□□□□ 0.59
SMC4-226ENST00000497311 I3L4J1 428 aa18.76■□□□□ 0.59
SMC4-226ENST00000497311 TOM1L1O75674 476 aa18.76■□□□□ 0.59
SMC4-226ENST00000497311 CD2BP2O95400 341 aaKnown RBP18.76■□□□□ 0.59
SMC4-226ENST00000497311 POU2F2P09086 479 aa18.76■□□□□ 0.59
SMC4-226ENST00000497311 PLA2G4BP0C869 781 aa18.76■□□□□ 0.59
SMC4-226ENST00000497311 KCNE1P15382 129 aa18.76■□□□□ 0.59
SMC4-226ENST00000497311 MCM2P49736 904 aa18.76■□□□□ 0.59
SMC4-226ENST00000497311 SLC12A3P55017 1021 aa18.76■□□□□ 0.59
SMC4-226ENST00000497311 RSPO2Q6UXX9 243 aaPredicted RBP18.76■□□□□ 0.59
SMC4-226ENST00000497311 TMEM161BQ8NDZ6 487 aa18.76■□□□□ 0.59
SMC4-226ENST00000497311 GPR152Q8TDT2 470 aa18.76■□□□□ 0.59
SMC4-226ENST00000497311 ZBTB45Q96K62 511 aaPredicted RBP18.76■□□□□ 0.59
SMC4-226ENST00000497311 ANKFY1Q9P2R3 1169 aa18.76■□□□□ 0.59
SMC4-226ENST00000497311 SMC3Q9UQE7 1217 aa18.76■□□□□ 0.59
SMC4-226ENST00000497311 ZFHX2Q9C0A1 2572 aaPredicted RBP18.76■□□□□ 0.59
SMC4-226ENST00000497311 PROB1E7EW31 1015 aa18.75■□□□□ 0.59
SMC4-226ENST00000497311 RPL9P32969 192 aaKnown RBP18.75■□□□□ 0.59
SMC4-226ENST00000497311 NOLC1Q14978 699 aaKnown RBP eCLIP18.75■□□□□ 0.59
SMC4-226ENST00000497311 CCDC105Q8IYK2 499 aa18.75■□□□□ 0.59
SMC4-226ENST00000497311 ST13P5Q8NFI4 369 aaPredicted RBP18.75■□□□□ 0.59
SMC4-226ENST00000497311 FGF13Q92913 245 aa18.75■□□□□ 0.59
SMC4-226ENST00000497311 LARSQ9P2J5 1176 aaKnown RBP18.75■□□□□ 0.59
SMC4-226ENST00000497311 NUB1Q9Y5A7 615 aa18.75■□□□□ 0.59
SMC4-226ENST00000497311 H0YCG3 227 aa18.74■□□□□ 0.59
SMC4-226ENST00000497311 SYN3O14994 580 aa18.74■□□□□ 0.59
SMC4-226ENST00000497311 MAPTP10636 758 aaKnown RBP18.74■□□□□ 0.59
SMC4-226ENST00000497311 NBL1P41271 181 aa18.74■□□□□ 0.59
SMC4-226ENST00000497311 TMEM119Q4V9L6 283 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms