RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 ARID4BQ4LE39 1312 aaPredicted RBP5.08□□□□□ -1.6
SMC4-225ENST00000497203 ANO9A1A5B4 782 aa5.08□□□□□ -1.6
SMC4-225ENST00000497203 KLRG2A4D1S0 409 aaPredicted RBP5.08□□□□□ -1.6
SMC4-225ENST00000497203 ADCY6O43306 1168 aa5.08□□□□□ -1.6
SMC4-225ENST00000497203 B3GALT2O43825 422 aa5.08□□□□□ -1.6
SMC4-225ENST00000497203 MFAP3LO75121 409 aa5.08□□□□□ -1.6
SMC4-225ENST00000497203 PEX14O75381 377 aa5.08□□□□□ -1.6
SMC4-225ENST00000497203 ITGA10O75578 1167 aa5.08□□□□□ -1.6
SMC4-225ENST00000497203 C1SP09871 688 aa5.08□□□□□ -1.6
SMC4-225ENST00000497203 RHCEP18577 417 aa5.08□□□□□ -1.6
SMC4-225ENST00000497203 GNAT2P19087 354 aa5.08□□□□□ -1.6
SMC4-225ENST00000497203 CACNB3P54284 484 aa5.08□□□□□ -1.6
SMC4-225ENST00000497203 FAM193AP78312 1265 aa5.08□□□□□ -1.6
SMC4-225ENST00000497203 ZXDAP98168 799 aa5.08□□□□□ -1.6
SMC4-225ENST00000497203 RHDQ02161 417 aa5.08□□□□□ -1.6
SMC4-225ENST00000497203 CRHR2Q13324 411 aa5.08□□□□□ -1.6
SMC4-225ENST00000497203 BIRC2Q13490 618 aa5.08□□□□□ -1.6
SMC4-225ENST00000497203 PICALMQ13492 652 aa5.08□□□□□ -1.6
SMC4-225ENST00000497203 IL10RAQ13651 578 aa5.08□□□□□ -1.6
SMC4-225ENST00000497203 RAB39AQ14964 217 aa5.08□□□□□ -1.6
SMC4-225ENST00000497203 SEPT2Q15019 361 aa5.08□□□□□ -1.6
SMC4-225ENST00000497203 COBLL1Q53SF7 1204 aa5.08□□□□□ -1.6
SMC4-225ENST00000497203 CCDC157Q569K6 752 aa5.08□□□□□ -1.6
SMC4-225ENST00000497203 PDZD4Q76G19 769 aaPredicted RBP5.08□□□□□ -1.6
SMC4-225ENST00000497203 OVCH2Q7RTZ1 564 aa5.08□□□□□ -1.6
SMC4-225ENST00000497203 APBB1IPQ7Z5R6 666 aaPredicted RBP5.08□□□□□ -1.6
SMC4-225ENST00000497203 RSPH3Q86UC2 560 aa5.08□□□□□ -1.6
SMC4-225ENST00000497203 GSPT2Q8IYD1 628 aaKnown RBP5.08□□□□□ -1.6
SMC4-225ENST00000497203 SAMD3Q8N6K7 520 aa5.08□□□□□ -1.6
SMC4-225ENST00000497203 OR2I1PQ8NGU4 316 aa5.08□□□□□ -1.6
SMC4-225ENST00000497203 MDM1Q8TC05 714 aa5.08□□□□□ -1.6
SMC4-225ENST00000497203 NSUN6Q8TEA1 469 aaKnown RBP5.08□□□□□ -1.6
SMC4-225ENST00000497203 ATXN2LQ8WWM7 1075 aaKnown RBP5.08□□□□□ -1.6
SMC4-225ENST00000497203 ST8SIA2Q92186 375 aa5.08□□□□□ -1.6
SMC4-225ENST00000497203 KAT5Q92993 513 aa5.08□□□□□ -1.6
SMC4-225ENST00000497203 PGBD4Q96DM1 585 aa5.08□□□□□ -1.6
SMC4-225ENST00000497203 CDK5RAP3Q96JB5 506 aa5.08□□□□□ -1.6
SMC4-225ENST00000497203 FAM167AQ96KS9 214 aa5.08□□□□□ -1.6
SMC4-225ENST00000497203 PSMD1Q99460 953 aa5.08□□□□□ -1.6
SMC4-225ENST00000497203 CGRRF1Q99675 332 aa5.08□□□□□ -1.6
SMC4-225ENST00000497203 LSM14BQ9BX40 385 aaKnown RBP5.08□□□□□ -1.6
SMC4-225ENST00000497203 GPR87Q9BY21 358 aa5.08□□□□□ -1.6
SMC4-225ENST00000497203 CPEB1Q9BZB8 566 aaKnown RBP5.08□□□□□ -1.6
SMC4-225ENST00000497203 VPS11Q9H270 941 aa5.08□□□□□ -1.6
SMC4-225ENST00000497203 LANCL2Q9NS86 450 aa5.08□□□□□ -1.6
SMC4-225ENST00000497203 GPRC5DQ9NZD1 345 aa5.08□□□□□ -1.6
SMC4-225ENST00000497203 USP25Q9UHP3 1055 aa5.08□□□□□ -1.6
SMC4-225ENST00000497203 STXBP5LQ9Y2K9 1186 aa5.08□□□□□ -1.6
SMC4-225ENST00000497203 PCDHA13Q9Y5I0 950 aa5.08□□□□□ -1.6
SMC4-225ENST00000497203 TPP1O14773 563 aa5.07□□□□□ -1.6
SMC4-225ENST00000497203 IPO13O94829 963 aaKnown RBP5.07□□□□□ -1.6
SMC4-225ENST00000497203 FTLP02792 175 aaPredicted RBP5.07□□□□□ -1.6
SMC4-225ENST00000497203 ALDH2P05091 517 aa5.07□□□□□ -1.6
SMC4-225ENST00000497203 HK1P19367 917 aa5.07□□□□□ -1.6
SMC4-225ENST00000497203 HTR1BP28222 390 aa5.07□□□□□ -1.6
SMC4-225ENST00000497203 MAN2A2P49641 1150 aa5.07□□□□□ -1.6
SMC4-225ENST00000497203 FXR1P51114 621 aaKnown RBP eCLIP5.07□□□□□ -1.6
SMC4-225ENST00000497203 USP14P54578 494 aa5.07□□□□□ -1.6
SMC4-225ENST00000497203 APBA1Q02410 837 aa5.07□□□□□ -1.6
SMC4-225ENST00000497203 DSC2Q02487 901 aa5.07□□□□□ -1.6
SMC4-225ENST00000497203 FOXE3Q13461 319 aa5.07□□□□□ -1.6
SMC4-225ENST00000497203 ANO6Q4KMQ2 910 aa5.07□□□□□ -1.6
SMC4-225ENST00000497203 DARS2Q6PI48 645 aaKnown RBP5.07□□□□□ -1.6
SMC4-225ENST00000497203 CCDC149Q6ZUS6 474 aa5.07□□□□□ -1.6
SMC4-225ENST00000497203 Q6ZVL8 140 aa5.07□□□□□ -1.6
SMC4-225ENST00000497203 DAAM2Q86T65 1068 aa5.07□□□□□ -1.6
SMC4-225ENST00000497203 XYLT1Q86Y38 959 aa5.07□□□□□ -1.6
SMC4-225ENST00000497203 TMPRSS6Q8IU80 811 aa5.07□□□□□ -1.6
SMC4-225ENST00000497203 Q8N1X5 172 aa5.07□□□□□ -1.6
SMC4-225ENST00000497203 PQLC1Q8N2U9 271 aa5.07□□□□□ -1.6
SMC4-225ENST00000497203 C3orf20Q8ND61 904 aa5.07□□□□□ -1.6
SMC4-225ENST00000497203 SVIPQ8NHG7 77 aa5.07□□□□□ -1.6
SMC4-225ENST00000497203 PPP1R35Q8TAP8 253 aa5.07□□□□□ -1.6
SMC4-225ENST00000497203 MTFMTQ96DP5 389 aaKnown RBP5.07□□□□□ -1.6
SMC4-225ENST00000497203 ZNF503Q96F45 646 aa5.07□□□□□ -1.6
SMC4-225ENST00000497203 CDC5LQ99459 802 aaKnown RBP5.07□□□□□ -1.6
SMC4-225ENST00000497203 MNTQ99583 582 aa5.07□□□□□ -1.6
SMC4-225ENST00000497203 CPPED1Q9BRF8 314 aaPredicted RBP5.07□□□□□ -1.6
SMC4-225ENST00000497203 CALCOCO1Q9P1Z2 691 aa5.07□□□□□ -1.6
SMC4-225ENST00000497203 CEP72Q9P209 647 aa5.07□□□□□ -1.6
SMC4-225ENST00000497203 TRPS1Q9UHF7 1281 aa5.07□□□□□ -1.6
SMC4-225ENST00000497203 CAPN8A6NHC0 703 aa5.06□□□□□ -1.6
SMC4-225ENST00000497203 WNT10BO00744 389 aa5.06□□□□□ -1.6
SMC4-225ENST00000497203 MAP2K6P52564 334 aa5.06□□□□□ -1.6
SMC4-225ENST00000497203 GPSM2P81274 684 aa5.06□□□□□ -1.6
SMC4-225ENST00000497203 CNGB1Q14028 1251 aaPredicted RBP5.06□□□□□ -1.6
SMC4-225ENST00000497203 GALEQ14376 348 aa5.06□□□□□ -1.6
SMC4-225ENST00000497203 ATP2B3Q16720 1220 aa5.06□□□□□ -1.6
SMC4-225ENST00000497203 MIIPQ5JXC2 388 aa5.06□□□□□ -1.6
SMC4-225ENST00000497203 MFSD14BQ5SR56 506 aa5.06□□□□□ -1.6
SMC4-225ENST00000497203 PRAMEF14Q5SWL7 426 aa5.06□□□□□ -1.6
SMC4-225ENST00000497203 SYCP2LQ5T4T6 812 aa5.06□□□□□ -1.6
SMC4-225ENST00000497203 ANKS6Q68DC2 871 aa5.06□□□□□ -1.6
SMC4-225ENST00000497203 CYB5RLQ6IPT4 315 aa5.06□□□□□ -1.6
SMC4-225ENST00000497203 CRIP3Q6Q6R5 217 aa5.06□□□□□ -1.6
SMC4-225ENST00000497203 GADL1Q6ZQY3 521 aa5.06□□□□□ -1.6
SMC4-225ENST00000497203 HTR3DQ70Z44 454 aa5.06□□□□□ -1.6
SMC4-225ENST00000497203 KIAA0319LQ8IZA0 1049 aa5.06□□□□□ -1.6
SMC4-225ENST00000497203 REPS2Q8NFH8 660 aa5.06□□□□□ -1.6
SMC4-225ENST00000497203 FBXO18Q8NFZ0 1043 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms