RNA–Protein interactions for RNA: ENST00000496818.2

CACNA1C-229, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-229ENST00000496818 ZNF587Q96SQ5 575 aaPredicted RBP6.47□□□□□ -1.37
CACNA1C-229ENST00000496818 PPP1R16BQ96T49 567 aa6.47□□□□□ -1.37
CACNA1C-229ENST00000496818 PCYT2Q99447 389 aa6.47□□□□□ -1.37
CACNA1C-229ENST00000496818 MRPL9Q9BYD2 267 aaKnown RBP6.47□□□□□ -1.37
CACNA1C-229ENST00000496818 TMEM117Q9H0C3 514 aa6.47□□□□□ -1.37
CACNA1C-229ENST00000496818 ACBD3Q9H3P7 528 aa6.47□□□□□ -1.37
CACNA1C-229ENST00000496818 ELAC1Q9H777 363 aaKnown RBP6.47□□□□□ -1.37
CACNA1C-229ENST00000496818 ERVK-5Q9HDB9 667 aa6.47□□□□□ -1.37
CACNA1C-229ENST00000496818 NGRNQ9NPE2 291 aaKnown RBP6.47□□□□□ -1.37
CACNA1C-229ENST00000496818 RIC8AQ9NPQ8 531 aa6.47□□□□□ -1.37
CACNA1C-229ENST00000496818 RGS18Q9NS28 235 aa6.47□□□□□ -1.37
CACNA1C-229ENST00000496818 FRRS1LQ9P0K9 344 aa6.47□□□□□ -1.37
CACNA1C-229ENST00000496818 PCDHGC5Q9Y5F6 944 aa6.47□□□□□ -1.37
CACNA1C-229ENST00000496818 TAF6LQ9Y6J9 622 aa6.47□□□□□ -1.37
CACNA1C-229ENST00000496818 KIAA1217Q5T5P2 1943 aa6.46□□□□□ -1.37
CACNA1C-229ENST00000496818 hCG_1642624A0A1W2PR95 340 aa6.46□□□□□ -1.38
CACNA1C-229ENST00000496818 GOLGA8AA7E2F4 631 aa6.46□□□□□ -1.38
CACNA1C-229ENST00000496818 GOLGA8BA8MQT2 603 aa6.46□□□□□ -1.38
CACNA1C-229ENST00000496818 LINC01387J3KSC0 135 aa6.46□□□□□ -1.38
CACNA1C-229ENST00000496818 OIP5O43482 229 aa6.46□□□□□ -1.38
CACNA1C-229ENST00000496818 EPB41L2O43491 1005 aaKnown RBP6.46□□□□□ -1.38
CACNA1C-229ENST00000496818 MGEA5O60502 916 aa6.46□□□□□ -1.38
CACNA1C-229ENST00000496818 C22orf31O95567 290 aa6.46□□□□□ -1.38
CACNA1C-229ENST00000496818 CELA2BP08218 269 aaPredicted RBP6.46□□□□□ -1.38
CACNA1C-229ENST00000496818 FGFR1P11362 822 aa6.46□□□□□ -1.38
CACNA1C-229ENST00000496818 SP100P23497 879 aaPredicted RBP6.46□□□□□ -1.38
CACNA1C-229ENST00000496818 KLRC1P26715 233 aa6.46□□□□□ -1.38
CACNA1C-229ENST00000496818 CRYBB1P53674 252 aaPredicted RBP6.46□□□□□ -1.38
CACNA1C-229ENST00000496818 RACK1P63244 317 aaKnown RBP6.46□□□□□ -1.38
CACNA1C-229ENST00000496818 PCDH1Q08174 1060 aa6.46□□□□□ -1.38
CACNA1C-229ENST00000496818 ITGB3BPQ13352 177 aaPredicted RBP6.46□□□□□ -1.38
CACNA1C-229ENST00000496818 HSP90AA2PQ14568 343 aaPredicted RBP6.46□□□□□ -1.38
CACNA1C-229ENST00000496818 SMC1AQ14683 1233 aaKnown RBP6.46□□□□□ -1.38
CACNA1C-229ENST00000496818 ZNF423Q2M1K9 1284 aa6.46□□□□□ -1.38
CACNA1C-229ENST00000496818 KIZQ2M2Z5 673 aa6.46□□□□□ -1.38
CACNA1C-229ENST00000496818 ZNF484Q5JVG2 852 aa6.46□□□□□ -1.38
CACNA1C-229ENST00000496818 HGSNATQ68CP4 663 aa6.46□□□□□ -1.38
CACNA1C-229ENST00000496818 MCTP2Q6DN12 878 aa6.46□□□□□ -1.38
CACNA1C-229ENST00000496818 ANKRD54Q6NXT1 300 aa6.46□□□□□ -1.38
CACNA1C-229ENST00000496818 LLGL2Q6P1M3 1020 aa6.46□□□□□ -1.38
CACNA1C-229ENST00000496818 C20orf204Q6ZNR8 217 aa6.46□□□□□ -1.38
CACNA1C-229ENST00000496818 NIPA1Q7RTP0 329 aa6.46□□□□□ -1.38
CACNA1C-229ENST00000496818 VN1R5Q7Z5H4 357 aa6.46□□□□□ -1.38
CACNA1C-229ENST00000496818 SGMS1Q86VZ5 419 aa6.46□□□□□ -1.38
CACNA1C-229ENST00000496818 PLA2G4DQ86XP0 818 aa6.46□□□□□ -1.38
CACNA1C-229ENST00000496818 CCDC60Q8IWA6 550 aaPredicted RBP6.46□□□□□ -1.38
CACNA1C-229ENST00000496818 UBALD2Q8IYN6 164 aa6.46□□□□□ -1.38
CACNA1C-229ENST00000496818 TDRD5Q8NAT2 981 aaKnown RBP6.46□□□□□ -1.38
CACNA1C-229ENST00000496818 RASGRP4Q8TDF6 673 aa6.46□□□□□ -1.38
CACNA1C-229ENST00000496818 TMEM40Q8WWA1 233 aa6.46□□□□□ -1.38
CACNA1C-229ENST00000496818 SUSD6Q92537 303 aa6.46□□□□□ -1.38
CACNA1C-229ENST00000496818 ATOH1Q92858 354 aaPredicted RBP6.46□□□□□ -1.38
CACNA1C-229ENST00000496818 RIPOR3Q96MK2 946 aa6.46□□□□□ -1.38
CACNA1C-229ENST00000496818 ZNF577Q9BSK1 485 aa6.46□□□□□ -1.38
CACNA1C-229ENST00000496818 ADAM19Q9H013 955 aa6.46□□□□□ -1.38
CACNA1C-229ENST00000496818 CLEC4MQ9H2X3 399 aaPredicted RBP6.46□□□□□ -1.38
CACNA1C-229ENST00000496818 TMX1Q9H3N1 280 aa6.46□□□□□ -1.38
CACNA1C-229ENST00000496818 MFSD1Q9H3U5 465 aa6.46□□□□□ -1.38
CACNA1C-229ENST00000496818 TYW1Q9NV66 732 aaKnown RBP6.46□□□□□ -1.38
CACNA1C-229ENST00000496818 KBTBD4Q9NVX7 518 aa6.46□□□□□ -1.38
CACNA1C-229ENST00000496818 SOX13Q9UN79 622 aa6.46□□□□□ -1.38
CACNA1C-229ENST00000496818 ST3GAL5Q9UNP4 418 aa6.46□□□□□ -1.38
CACNA1C-229ENST00000496818 SORCS3Q9UPU3 1222 aa6.46□□□□□ -1.38
CACNA1C-229ENST00000496818 AKT3Q9Y243 479 aa6.46□□□□□ -1.38
CACNA1C-229ENST00000496818 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.46□□□□□ -1.38
CACNA1C-229ENST00000496818 NOC2LQ9Y3T9 749 aaKnown RBP6.46□□□□□ -1.38
CACNA1C-229ENST00000496818 SAMM50Q9Y512 469 aa6.46□□□□□ -1.38
CACNA1C-229ENST00000496818 TET1Q8NFU7 2136 aa6.46□□□□□ -1.38
CACNA1C-229ENST00000496818 IGKV6D-21A0A0A0MT36 114 aa6.45□□□□□ -1.38
CACNA1C-229ENST00000496818 CCDC196A0A1B0GTZ2 297 aa6.45□□□□□ -1.38
CACNA1C-229ENST00000496818 SMCO2A6NFE2 343 aa6.45□□□□□ -1.38
CACNA1C-229ENST00000496818 C9IYK1 514 aa6.45□□□□□ -1.38
CACNA1C-229ENST00000496818 GOLGA6L22H0YM25 854 aa6.45□□□□□ -1.38
CACNA1C-229ENST00000496818 IPO5O00410 1097 aaKnown RBP6.45□□□□□ -1.38
CACNA1C-229ENST00000496818 FSCN2O14926 492 aa6.45□□□□□ -1.38
CACNA1C-229ENST00000496818 SLC27A2O14975 620 aa6.45□□□□□ -1.38
CACNA1C-229ENST00000496818 MAGEB2O15479 319 aa6.45□□□□□ -1.38
CACNA1C-229ENST00000496818 ZBTB43O43298 467 aa6.45□□□□□ -1.38
CACNA1C-229ENST00000496818 LILRB5O75023 590 aa6.45□□□□□ -1.38
CACNA1C-229ENST00000496818 PAGE1O75459 146 aa6.45□□□□□ -1.38
CACNA1C-229ENST00000496818 VTNP04004 478 aa6.45□□□□□ -1.38
CACNA1C-229ENST00000496818 ARP10275 920 aa6.45□□□□□ -1.38
CACNA1C-229ENST00000496818 GBP2P32456 591 aaPredicted RBP6.45□□□□□ -1.38
CACNA1C-229ENST00000496818 AFF1P51825 1210 aaKnown RBP6.45□□□□□ -1.38
CACNA1C-229ENST00000496818 RCAN1P53805 252 aa6.45□□□□□ -1.38
CACNA1C-229ENST00000496818 VCPP55072 806 aaKnown RBP6.45□□□□□ -1.38
CACNA1C-229ENST00000496818 NUCB2P80303 420 aa6.45□□□□□ -1.38
CACNA1C-229ENST00000496818 ITIH3Q06033 890 aa6.45□□□□□ -1.38
CACNA1C-229ENST00000496818 APOBRQ0VD83 1088 aa6.45□□□□□ -1.38
CACNA1C-229ENST00000496818 TCF15Q12870 199 aa6.45□□□□□ -1.38
CACNA1C-229ENST00000496818 GIT2Q14161 759 aa6.45□□□□□ -1.38
CACNA1C-229ENST00000496818 FAM102BQ5T8I3 360 aa6.45□□□□□ -1.38
CACNA1C-229ENST00000496818 CREB3L3Q68CJ9 461 aa6.45□□□□□ -1.38
CACNA1C-229ENST00000496818 ZNF746Q6NUN9 644 aaPredicted RBP6.45□□□□□ -1.38
CACNA1C-229ENST00000496818 APOA5Q6Q788 366 aa6.45□□□□□ -1.38
CACNA1C-229ENST00000496818 TMEM184AQ6ZMB5 413 aa6.45□□□□□ -1.38
CACNA1C-229ENST00000496818 RTN4RL1Q86UN2 441 aaPredicted RBP6.45□□□□□ -1.38
CACNA1C-229ENST00000496818 FAM228AQ86W67 206 aa6.45□□□□□ -1.38
CACNA1C-229ENST00000496818 RELL1Q8IUW5 271 aa6.45□□□□□ -1.38
CACNA1C-229ENST00000496818 REXO1Q8N1G1 1221 aaKnown RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms