RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 CALCOCO1Q9P1Z2 691 aa13.98□□□□□ -0.17
GARNL3-220ENST00000496711 KCNH4Q9UQ05 1017 aa13.98□□□□□ -0.17
GARNL3-220ENST00000496711 MGAMO43451 1857 aa13.98□□□□□ -0.17
GARNL3-220ENST00000496711 PLXNB2O15031 1838 aa13.98□□□□□ -0.17
GARNL3-220ENST00000496711 FAM187AA6NFU0 413 aa13.97□□□□□ -0.17
GARNL3-220ENST00000496711 PHF2O75151 1096 aa13.97□□□□□ -0.17
GARNL3-220ENST00000496711 RPS6KA5O75582 802 aa13.97□□□□□ -0.17
GARNL3-220ENST00000496711 ARIH2O95376 493 aa13.97□□□□□ -0.17
GARNL3-220ENST00000496711 MYBL1P10243 752 aa13.97□□□□□ -0.17
GARNL3-220ENST00000496711 UNGP13051 313 aaPredicted RBP13.97□□□□□ -0.17
GARNL3-220ENST00000496711 EFNA5P52803 228 aa13.97□□□□□ -0.17
GARNL3-220ENST00000496711 PPIL2Q13356 520 aa13.97□□□□□ -0.17
GARNL3-220ENST00000496711 CUL2Q13617 745 aa13.97□□□□□ -0.17
GARNL3-220ENST00000496711 ZSCAN26Q16670 478 aa13.97□□□□□ -0.17
GARNL3-220ENST00000496711 SPOPLQ6IQ16 392 aa13.97□□□□□ -0.17
GARNL3-220ENST00000496711 ADAT2Q7Z6V5 191 aaKnown RBP13.97□□□□□ -0.17
GARNL3-220ENST00000496711 BBXQ8WY36 941 aaPredicted RBP13.97□□□□□ -0.17
GARNL3-220ENST00000496711 CDCA5Q96FF9 252 aa13.97□□□□□ -0.17
GARNL3-220ENST00000496711 BTBD6Q96KE9 485 aa13.97□□□□□ -0.17
GARNL3-220ENST00000496711 FGD4Q96M96 766 aa13.97□□□□□ -0.17
GARNL3-220ENST00000496711 TRIM51Q9BSJ1 452 aa13.97□□□□□ -0.17
GARNL3-220ENST00000496711 CNTNAP2Q9UHC6 1331 aa13.97□□□□□ -0.17
GARNL3-220ENST00000496711 GAS2O43903 313 aaKnown RBP13.97□□□□□ -0.17
GARNL3-220ENST00000496711 LGR5O75473 907 aa13.97□□□□□ -0.17
GARNL3-220ENST00000496711 KRT14P02533 472 aa13.97□□□□□ -0.17
GARNL3-220ENST00000496711 DRP2Q13474 957 aa13.97□□□□□ -0.17
GARNL3-220ENST00000496711 IER5Q5VY09 327 aa13.97□□□□□ -0.17
GARNL3-220ENST00000496711 CDCA2Q69YH5 1023 aaPredicted RBP13.97□□□□□ -0.17
GARNL3-220ENST00000496711 AADACL2Q6P093 401 aa13.97□□□□□ -0.17
GARNL3-220ENST00000496711 TCP11Q8WWU5 503 aa13.97□□□□□ -0.17
GARNL3-220ENST00000496711 GLG1Q92896 1179 aa13.97□□□□□ -0.17
GARNL3-220ENST00000496711 ARL8AQ96BM9 186 aa13.97□□□□□ -0.17
GARNL3-220ENST00000496711 GPR20Q99678 358 aa13.97□□□□□ -0.17
GARNL3-220ENST00000496711 DPH5Q9H2P9 285 aa13.97□□□□□ -0.17
GARNL3-220ENST00000496711 R3HDMLQ9H3Y0 253 aa13.97□□□□□ -0.17
GARNL3-220ENST00000496711 AVENQ9NQS1 362 aaPredicted RBP13.97□□□□□ -0.17
GARNL3-220ENST00000496711 RASAL2Q9UJF2 1139 aa13.97□□□□□ -0.17
GARNL3-220ENST00000496711 PCDHA3Q9Y5H8 950 aa13.97□□□□□ -0.17
GARNL3-220ENST00000496711 NOP56O00567 594 aaKnown RBP13.96□□□□□ -0.17
GARNL3-220ENST00000496711 SOCS7O14512 581 aa13.96□□□□□ -0.17
GARNL3-220ENST00000496711 SHOX2O60902 331 aaPredicted RBP13.96□□□□□ -0.17
GARNL3-220ENST00000496711 CALCAP01258 141 aa13.96□□□□□ -0.17
GARNL3-220ENST00000496711 PGK2P07205 417 aa13.96□□□□□ -0.17
GARNL3-220ENST00000496711 CLTAP09496 248 aa13.96□□□□□ -0.17
GARNL3-220ENST00000496711 HARSP12081 509 aaKnown RBP13.96□□□□□ -0.17
GARNL3-220ENST00000496711 ACO1P21399 889 aaKnown RBP13.96□□□□□ -0.17
GARNL3-220ENST00000496711 TBXAS1P24557 533 aaPredicted RBP13.96□□□□□ -0.17
GARNL3-220ENST00000496711 CHRNA3P32297 505 aa13.96□□□□□ -0.17
GARNL3-220ENST00000496711 HSD17B3P37058 310 aa13.96□□□□□ -0.17
GARNL3-220ENST00000496711 CENPCQ03188 943 aa13.96□□□□□ -0.17
GARNL3-220ENST00000496711 MTMR3Q13615 1198 aa13.96□□□□□ -0.17
GARNL3-220ENST00000496711 TTLL12Q14166 644 aaPredicted RBP13.96□□□□□ -0.17
GARNL3-220ENST00000496711 KCTD2Q14681 263 aa13.96□□□□□ -0.17
GARNL3-220ENST00000496711 LRIG3Q6UXM1 1119 aa13.96□□□□□ -0.17
GARNL3-220ENST00000496711 BRSK2Q8IWQ3 736 aa13.96□□□□□ -0.17
GARNL3-220ENST00000496711 EXOC8Q8IYI6 725 aa13.96□□□□□ -0.17
GARNL3-220ENST00000496711 MCOLN2Q8IZK6 566 aa13.96□□□□□ -0.17
GARNL3-220ENST00000496711 PRPF31Q8WWY3 499 aaKnown RBP13.96□□□□□ -0.17
GARNL3-220ENST00000496711 MMP19Q99542 508 aa13.96□□□□□ -0.17
GARNL3-220ENST00000496711 MRPL4Q9BYD3 311 aaKnown RBP13.96□□□□□ -0.17
GARNL3-220ENST00000496711 CCDC113Q9H0I3 377 aa13.96□□□□□ -0.17
GARNL3-220ENST00000496711 APOBEC3GQ9HC16 384 aaKnown RBP13.96□□□□□ -0.17
GARNL3-220ENST00000496711 TXNRD2Q9NNW7 524 aa13.96□□□□□ -0.17
GARNL3-220ENST00000496711 PLAAQ9Y263 795 aa13.96□□□□□ -0.17
GARNL3-220ENST00000496711 DNAJC25-GNG10A0A024R161 153 aa13.95□□□□□ -0.18
GARNL3-220ENST00000496711 CLDN3O15551 220 aa13.95□□□□□ -0.18
GARNL3-220ENST00000496711 MSCO60682 206 aa13.95□□□□□ -0.18
GARNL3-220ENST00000496711 CYP1A1P04798 512 aaPredicted RBP13.95□□□□□ -0.18
GARNL3-220ENST00000496711 OSBPP22059 807 aa13.95□□□□□ -0.18
GARNL3-220ENST00000496711 MARK3P27448 753 aa13.95□□□□□ -0.18
GARNL3-220ENST00000496711 NSFP46459 744 aaKnown RBP13.95□□□□□ -0.18
GARNL3-220ENST00000496711 AP3M2P53677 418 aa13.95□□□□□ -0.18
GARNL3-220ENST00000496711 HNRNPH2P55795 449 aaKnown RBP13.95□□□□□ -0.18
GARNL3-220ENST00000496711 RWDD2BP57060 319 aa13.95□□□□□ -0.18
GARNL3-220ENST00000496711 NOP14P78316 857 aaKnown RBP13.95□□□□□ -0.18
GARNL3-220ENST00000496711 GRM1Q13255 1194 aa13.95□□□□□ -0.18
GARNL3-220ENST00000496711 CELF3Q5SZQ8 465 aaKnown RBP13.95□□□□□ -0.18
GARNL3-220ENST00000496711 TRIM72Q6ZMU5 477 aa13.95□□□□□ -0.18
GARNL3-220ENST00000496711 MOB2Q70IA6 237 aa13.95□□□□□ -0.18
GARNL3-220ENST00000496711 TRIM50Q86XT4 487 aa13.95□□□□□ -0.18
GARNL3-220ENST00000496711 CPNE8Q86YQ8 564 aa13.95□□□□□ -0.18
GARNL3-220ENST00000496711 JAMLQ86YT9 394 aa13.95□□□□□ -0.18
GARNL3-220ENST00000496711 ZBTB8OSQ8IWT0 167 aa13.95□□□□□ -0.18
GARNL3-220ENST00000496711 ATP8B4Q8TF62 1192 aa13.95□□□□□ -0.18
GARNL3-220ENST00000496711 RBPJLQ9UBG7 517 aa13.95□□□□□ -0.18
GARNL3-220ENST00000496711 ANAPC7Q9UJX3 599 aa13.95□□□□□ -0.18
GARNL3-220ENST00000496711 EVPLQ92817 2033 aa13.95□□□□□ -0.18
GARNL3-220ENST00000496711 TOM1L1O75674 476 aa13.95□□□□□ -0.18
GARNL3-220ENST00000496711 IVLP07476 585 aa13.95□□□□□ -0.18
GARNL3-220ENST00000496711 PYGMP11217 842 aa13.95□□□□□ -0.18
GARNL3-220ENST00000496711 MAPK4P31152 587 aa13.95□□□□□ -0.18
GARNL3-220ENST00000496711 MXD4Q14582 209 aaPredicted RBP13.95□□□□□ -0.18
GARNL3-220ENST00000496711 UAP1Q16222 522 aaPredicted RBP13.95□□□□□ -0.18
GARNL3-220ENST00000496711 HSDL1Q3SXM5 330 aa13.95□□□□□ -0.18
GARNL3-220ENST00000496711 DUPD1Q68J44 220 aa13.95□□□□□ -0.18
GARNL3-220ENST00000496711 PLPPR4Q7Z2D5 763 aa13.95□□□□□ -0.18
GARNL3-220ENST00000496711 TMC3Q7Z5M5 1100 aa13.95□□□□□ -0.18
GARNL3-220ENST00000496711 SLC13A5Q86YT5 568 aaPredicted RBP13.95□□□□□ -0.18
GARNL3-220ENST00000496711 WDR49Q8IV35 697 aa13.95□□□□□ -0.18
GARNL3-220ENST00000496711 EFCAB13Q8IY85 973 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms