RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.78■□□□□ 0.12
CXCL12-208ENST00000496375 APBB1IPQ7Z5R6 666 aaPredicted RBP15.78■□□□□ 0.12
CXCL12-208ENST00000496375 SLC44A3Q8N4M1 653 aa15.78■□□□□ 0.12
CXCL12-208ENST00000496375 NXPE3Q969Y0 559 aa15.78■□□□□ 0.12
CXCL12-208ENST00000496375 ZNF396Q96N95 335 aaPredicted RBP15.78■□□□□ 0.12
CXCL12-208ENST00000496375 PPP1R10Q96QC0 940 aaKnown RBP15.78■□□□□ 0.12
CXCL12-208ENST00000496375 DAXXQ9UER7 740 aaPredicted RBP15.78■□□□□ 0.12
CXCL12-208ENST00000496375 FBXO2Q9UK22 296 aaPredicted RBP15.78■□□□□ 0.12
CXCL12-208ENST00000496375 DNM3Q9UQ16 869 aa15.78■□□□□ 0.12
CXCL12-208ENST00000496375 TNFSF13BQ9Y275 285 aa15.78■□□□□ 0.12
CXCL12-208ENST00000496375 SRPRBQ9Y5M8 271 aaKnown RBP15.78■□□□□ 0.12
CXCL12-208ENST00000496375 VWA3AA6NCI4 1184 aa15.77■□□□□ 0.12
CXCL12-208ENST00000496375 TMEM189-UBE2V1I3L0A0 370 aa15.77■□□□□ 0.12
CXCL12-208ENST00000496375 PI15O43692 258 aa15.77■□□□□ 0.12
CXCL12-208ENST00000496375 HIP1RO75146 1068 aa15.77■□□□□ 0.12
CXCL12-208ENST00000496375 B3GAT3O94766 335 aa15.77■□□□□ 0.12
CXCL12-208ENST00000496375 C8AP07357 584 aa15.77■□□□□ 0.12
CXCL12-208ENST00000496375 LAMP2P13473 410 aa15.77■□□□□ 0.12
CXCL12-208ENST00000496375 FSHRP23945 695 aa15.77■□□□□ 0.12
CXCL12-208ENST00000496375 IGFBP6P24592 240 aaPredicted RBP15.77■□□□□ 0.12
CXCL12-208ENST00000496375 CDC25AP30304 524 aa15.77■□□□□ 0.12
CXCL12-208ENST00000496375 CLCNKBP51801 687 aa15.77■□□□□ 0.12
CXCL12-208ENST00000496375 PPM1LQ5SGD2 360 aa15.77■□□□□ 0.12
CXCL12-208ENST00000496375 PDXDC1Q6P996 788 aa15.77■□□□□ 0.12
CXCL12-208ENST00000496375 GRASPQ7Z6J2 395 aaPredicted RBP15.77■□□□□ 0.12
CXCL12-208ENST00000496375 DAW1Q8N136 415 aa15.77■□□□□ 0.12
CXCL12-208ENST00000496375 CEP120Q8N960 986 aa15.77■□□□□ 0.12
CXCL12-208ENST00000496375 LINC00301Q8NCQ3 95 aa15.77■□□□□ 0.12
CXCL12-208ENST00000496375 ACO2Q99798 780 aaKnown RBP15.77■□□□□ 0.12
CXCL12-208ENST00000496375 GOLGA2P5Q9HBQ8 144 aa15.77■□□□□ 0.12
CXCL12-208ENST00000496375 WNT16Q9UBV4 365 aa15.77■□□□□ 0.12
CXCL12-208ENST00000496375 STK25O00506 426 aa15.76■□□□□ 0.11
CXCL12-208ENST00000496375 PPP6R2O75170 966 aa15.76■□□□□ 0.11
CXCL12-208ENST00000496375 HNRNPA1P09651 372 aaKnown RBP eCLIP15.76■□□□□ 0.11
CXCL12-208ENST00000496375 SRFP11831 508 aa15.76■□□□□ 0.11
CXCL12-208ENST00000496375 FGFR3P22607 806 aa15.76■□□□□ 0.11
CXCL12-208ENST00000496375 OR1D2P34982 312 aa15.76■□□□□ 0.11
CXCL12-208ENST00000496375 GRM5P41594 1212 aa15.76■□□□□ 0.11
CXCL12-208ENST00000496375 YARSP54577 528 aaKnown RBP15.76■□□□□ 0.11
CXCL12-208ENST00000496375 NTHL1P78549 312 aa15.76■□□□□ 0.11
CXCL12-208ENST00000496375 DMP1Q13316 513 aaPredicted RBP15.76■□□□□ 0.11
CXCL12-208ENST00000496375 ZNF568Q3ZCX4 644 aa15.76■□□□□ 0.11
CXCL12-208ENST00000496375 RINT1Q6NUQ1 792 aa15.76■□□□□ 0.11
CXCL12-208ENST00000496375 DCLRE1AQ6PJP8 1040 aa15.76■□□□□ 0.11
CXCL12-208ENST00000496375 ST13P5Q8NFI4 369 aaPredicted RBP15.76■□□□□ 0.11
CXCL12-208ENST00000496375 DRC1Q96MC2 740 aa15.76■□□□□ 0.11
CXCL12-208ENST00000496375 UROC1Q96N76 676 aa15.76■□□□□ 0.11
CXCL12-208ENST00000496375 RTP3Q9BQQ7 232 aa15.76■□□□□ 0.11
CXCL12-208ENST00000496375 RUSC1Q9BVN2 902 aa15.76■□□□□ 0.11
CXCL12-208ENST00000496375 CCDC94Q9BW85 323 aaPredicted RBP15.76■□□□□ 0.11
CXCL12-208ENST00000496375 MRPL4Q9BYD3 311 aaKnown RBP15.76■□□□□ 0.11
CXCL12-208ENST00000496375 CDT1Q9H211 546 aa15.76■□□□□ 0.11
CXCL12-208ENST00000496375 TMEM134Q9H6X4 195 aa15.76■□□□□ 0.11
CXCL12-208ENST00000496375 KMT5AQ9NQR1 393 aa15.76■□□□□ 0.11
CXCL12-208ENST00000496375 ARHGAP28Q9P2N2 729 aa15.76■□□□□ 0.11
CXCL12-208ENST00000496375 CA14Q9ULX7 337 aa15.76■□□□□ 0.11
CXCL12-208ENST00000496375 SMIM28A0A1B0GU29 152 aa15.75■□□□□ 0.11
CXCL12-208ENST00000496375 KRBA1A5PL33 1030 aa15.75■□□□□ 0.11
CXCL12-208ENST00000496375 PROB1E7EW31 1015 aa15.75■□□□□ 0.11
CXCL12-208ENST00000496375 ANHXE9PGG2 379 aa15.75■□□□□ 0.11
CXCL12-208ENST00000496375 CCL16O15467 120 aa15.75■□□□□ 0.11
CXCL12-208ENST00000496375 RFX1P22670 979 aa15.75■□□□□ 0.11
CXCL12-208ENST00000496375 HOXA9P31269 272 aa15.75■□□□□ 0.11
CXCL12-208ENST00000496375 OSTNP61366 133 aa15.75■□□□□ 0.11
CXCL12-208ENST00000496375 GRIN1Q05586 938 aa15.75■□□□□ 0.11
CXCL12-208ENST00000496375 MAPK7Q13164 816 aa15.75■□□□□ 0.11
CXCL12-208ENST00000496375 HTR4Q13639 388 aa15.75■□□□□ 0.11
CXCL12-208ENST00000496375 RAB33AQ14088 237 aa15.75■□□□□ 0.11
CXCL12-208ENST00000496375 ZRSR1Q15695 479 aaKnown RBP15.75■□□□□ 0.11
CXCL12-208ENST00000496375 UPP1Q16831 310 aa15.75■□□□□ 0.11
CXCL12-208ENST00000496375 TMEM119Q4V9L6 283 aa15.75■□□□□ 0.11
CXCL12-208ENST00000496375 CD300LGQ6UXG3 332 aa15.75■□□□□ 0.11
CXCL12-208ENST00000496375 C1orf186Q6ZWK4 172 aa15.75■□□□□ 0.11
CXCL12-208ENST00000496375 TAS1R3Q7RTX0 852 aa15.75■□□□□ 0.11
CXCL12-208ENST00000496375 KCNK18Q7Z418 384 aa15.75■□□□□ 0.11
CXCL12-208ENST00000496375 SLC7A14Q8TBB6 771 aa15.75■□□□□ 0.11
CXCL12-208ENST00000496375 TARS2Q9BW92 718 aaKnown RBP15.75■□□□□ 0.11
CXCL12-208ENST00000496375 CCSER1Q9C0I3 900 aa15.75■□□□□ 0.11
CXCL12-208ENST00000496375 PTPRHQ9HD43 1115 aa15.75■□□□□ 0.11
CXCL12-208ENST00000496375 TOPORSQ9NS56 1045 aaPredicted RBP15.75■□□□□ 0.11
CXCL12-208ENST00000496375 MTRRQ9UBK8 725 aa15.75■□□□□ 0.11
CXCL12-208ENST00000496375 POLIQ9UNA4 740 aa15.75■□□□□ 0.11
CXCL12-208ENST00000496375 NUMBLQ9Y6R0 609 aa15.75■□□□□ 0.11
CXCL12-208ENST00000496375 I3L4J1 428 aa15.74■□□□□ 0.11
CXCL12-208ENST00000496375 TRAPPC3O43617 180 aa15.74■□□□□ 0.11
CXCL12-208ENST00000496375 XYLBO75191 536 aa15.74■□□□□ 0.11
CXCL12-208ENST00000496375 TKTP29401 623 aaKnown RBP15.74■□□□□ 0.11
CXCL12-208ENST00000496375 NBL1P41271 181 aa15.74■□□□□ 0.11
CXCL12-208ENST00000496375 BRCC3P46736 316 aa15.74■□□□□ 0.11
CXCL12-208ENST00000496375 SOX4Q06945 474 aaPredicted RBP15.74■□□□□ 0.11
CXCL12-208ENST00000496375 XKR4Q5GH76 650 aa15.74■□□□□ 0.11
CXCL12-208ENST00000496375 AXDND1Q5T1B0 1012 aaPredicted RBP15.74■□□□□ 0.11
CXCL12-208ENST00000496375 ALKAL1Q6UXT8 129 aa15.74■□□□□ 0.11
CXCL12-208ENST00000496375 RSPO2Q6UXX9 243 aaPredicted RBP15.74■□□□□ 0.11
CXCL12-208ENST00000496375 ASCL5Q7RTU5 278 aa15.74■□□□□ 0.11
CXCL12-208ENST00000496375 CCDC105Q8IYK2 499 aa15.74■□□□□ 0.11
CXCL12-208ENST00000496375 DTWD2Q8NBA8 298 aa15.74■□□□□ 0.11
CXCL12-208ENST00000496375 C3orf58Q8NDZ4 430 aa15.74■□□□□ 0.11
CXCL12-208ENST00000496375 GPR152Q8TDT2 470 aa15.74■□□□□ 0.11
CXCL12-208ENST00000496375 DDX27Q96GQ7 796 aaKnown RBP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms