RNA–Protein interactions for RNA: ENST00000495784.1

CLCNKA-207, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 727 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-207ENST00000495784 UPF2Q9HAU5 1272 aaKnown RBP20.19■□□□□ 0.82
CLCNKA-207ENST00000495784 GOLGA2P5Q9HBQ8 144 aa20.19■□□□□ 0.82
CLCNKA-207ENST00000495784 WNT16Q9UBV4 365 aa20.19■□□□□ 0.82
CLCNKA-207ENST00000495784 KCNG1Q9UIX4 513 aa20.19■□□□□ 0.82
CLCNKA-207ENST00000495784 ZFP37Q9Y6Q3 630 aaPredicted RBP20.19■□□□□ 0.82
CLCNKA-207ENST00000495784 MTCL1Q9Y4B5 1905 aaKnown RBP20.19■□□□□ 0.82
CLCNKA-207ENST00000495784 VWA3AA6NCI4 1184 aa20.18■□□□□ 0.82
CLCNKA-207ENST00000495784 SFI1A8K8P3 1242 aa20.18■□□□□ 0.82
CLCNKA-207ENST00000495784 STK25O00506 426 aa20.18■□□□□ 0.82
CLCNKA-207ENST00000495784 CCL16O15467 120 aa20.18■□□□□ 0.82
CLCNKA-207ENST00000495784 GFRA3O60609 400 aa20.18■□□□□ 0.82
CLCNKA-207ENST00000495784 SRFP11831 508 aa20.18■□□□□ 0.82
CLCNKA-207ENST00000495784 HARSP12081 509 aaKnown RBP20.18■□□□□ 0.82
CLCNKA-207ENST00000495784 NPR3P17342 541 aa20.18■□□□□ 0.82
CLCNKA-207ENST00000495784 IGFBP6P24592 240 aaPredicted RBP20.18■□□□□ 0.82
CLCNKA-207ENST00000495784 GUCY2CP25092 1073 aa20.18■□□□□ 0.82
CLCNKA-207ENST00000495784 GJB2P29033 226 aa20.18■□□□□ 0.82
CLCNKA-207ENST00000495784 HOXA9P31269 272 aa20.18■□□□□ 0.82
CLCNKA-207ENST00000495784 RAD51AP2Q09MP3 1159 aa20.18■□□□□ 0.82
CLCNKA-207ENST00000495784 AXDND1Q5T1B0 1012 aaPredicted RBP20.18■□□□□ 0.82
CLCNKA-207ENST00000495784 MPZL3Q6UWV2 235 aa20.18■□□□□ 0.82
CLCNKA-207ENST00000495784 ANKS3Q6ZW76 656 aa20.18■□□□□ 0.82
CLCNKA-207ENST00000495784 TAS1R3Q7RTX0 852 aa20.18■□□□□ 0.82
CLCNKA-207ENST00000495784 SLC7A14Q8TBB6 771 aa20.18■□□□□ 0.82
CLCNKA-207ENST00000495784 ACAP3Q96P50 834 aa20.18■□□□□ 0.82
CLCNKA-207ENST00000495784 MTRRQ9UBK8 725 aa20.18■□□□□ 0.82
CLCNKA-207ENST00000495784 CDY1Q9Y6F8 540 aa20.18■□□□□ 0.82
CLCNKA-207ENST00000495784 I3L4J1 428 aa20.17■□□□□ 0.82
CLCNKA-207ENST00000495784 TKTP29401 623 aaKnown RBP20.17■□□□□ 0.82
CLCNKA-207ENST00000495784 SMTNP53814 917 aa20.17■□□□□ 0.82
CLCNKA-207ENST00000495784 NTHL1P78549 312 aa20.17■□□□□ 0.82
CLCNKA-207ENST00000495784 HTR4Q13639 388 aa20.17■□□□□ 0.82
CLCNKA-207ENST00000495784 XKR4Q5GH76 650 aa20.17■□□□□ 0.82
CLCNKA-207ENST00000495784 HYIQ5T013 277 aa20.17■□□□□ 0.82
CLCNKA-207ENST00000495784 ALKAL1Q6UXT8 129 aa20.17■□□□□ 0.82
CLCNKA-207ENST00000495784 KCTD17Q8N5Z5 321 aa20.17■□□□□ 0.82
CLCNKA-207ENST00000495784 C3orf58Q8NDZ4 430 aa20.17■□□□□ 0.82
CLCNKA-207ENST00000495784 SPIRE2Q8WWL2 714 aa20.17■□□□□ 0.82
CLCNKA-207ENST00000495784 SNX27Q96L92 541 aa20.17■□□□□ 0.82
CLCNKA-207ENST00000495784 PNMA5Q96PV4 448 aa20.17■□□□□ 0.82
CLCNKA-207ENST00000495784 PLIN2Q99541 437 aa20.17■□□□□ 0.82
CLCNKA-207ENST00000495784 RTP3Q9BQQ7 232 aa20.17■□□□□ 0.82
CLCNKA-207ENST00000495784 ANKFY1Q9P2R3 1169 aa20.17■□□□□ 0.82
CLCNKA-207ENST00000495784 CDH7Q9ULB5 785 aa20.17■□□□□ 0.82
CLCNKA-207ENST00000495784 BACE2Q9Y5Z0 518 aa20.17■□□□□ 0.82
CLCNKA-207ENST00000495784 NUMBLQ9Y6R0 609 aa20.17■□□□□ 0.82
CLCNKA-207ENST00000495784 ANHXE9PGG2 379 aa20.16■□□□□ 0.82
CLCNKA-207ENST00000495784 PODXLO00592 558 aa20.16■□□□□ 0.82
CLCNKA-207ENST00000495784 PI15O43692 258 aa20.16■□□□□ 0.82
CLCNKA-207ENST00000495784 PLS3P13797 630 aa20.16■□□□□ 0.82
CLCNKA-207ENST00000495784 PROZP22891 400 aa20.16■□□□□ 0.82
CLCNKA-207ENST00000495784 BRCC3P46736 316 aa20.16■□□□□ 0.82
CLCNKA-207ENST00000495784 SOX4Q06945 474 aaPredicted RBP20.16■□□□□ 0.82
CLCNKA-207ENST00000495784 UVSSAQ2YD98 709 aa20.16■□□□□ 0.82
CLCNKA-207ENST00000495784 CD300LGQ6UXG3 332 aa20.16■□□□□ 0.82
CLCNKA-207ENST00000495784 SYT2Q8N9I0 419 aaPredicted RBP20.16■□□□□ 0.82
CLCNKA-207ENST00000495784 NTPCRQ9BSD7 190 aaKnown RBP20.16■□□□□ 0.82
CLCNKA-207ENST00000495784 CA14Q9ULX7 337 aa20.16■□□□□ 0.82
CLCNKA-207ENST00000495784 ABLIM1O14639 778 aa20.15■□□□□ 0.82
CLCNKA-207ENST00000495784 TOM1L1O75674 476 aa20.15■□□□□ 0.82
CLCNKA-207ENST00000495784 KCNE1P15382 129 aa20.15■□□□□ 0.82
CLCNKA-207ENST00000495784 MCM2P49736 904 aa20.15■□□□□ 0.82
CLCNKA-207ENST00000495784 ARL6IP4Q66PJ3 421 aaKnown RBP20.15■□□□□ 0.82
CLCNKA-207ENST00000495784 RTL10Q7L3V2 364 aa20.15■□□□□ 0.82
CLCNKA-207ENST00000495784 TMEM161BQ8NDZ6 487 aa20.15■□□□□ 0.82
CLCNKA-207ENST00000495784 ST13P5Q8NFI4 369 aaPredicted RBP20.15■□□□□ 0.82
CLCNKA-207ENST00000495784 ZMAT2Q96NC0 199 aaKnown RBP20.15■□□□□ 0.82
CLCNKA-207ENST00000495784 KCND2Q9NZV8 630 aa20.15■□□□□ 0.82
CLCNKA-207ENST00000495784 SMC3Q9UQE7 1217 aa20.15■□□□□ 0.82
CLCNKA-207ENST00000495784 NUB1Q9Y5A7 615 aa20.15■□□□□ 0.82
CLCNKA-207ENST00000495784 DOCK8Q8NF50 2099 aa20.14■□□□□ 0.81
CLCNKA-207ENST00000495784 VWA8A3KMH1 1905 aa20.14■□□□□ 0.81
CLCNKA-207ENST00000495784 KRBA1A5PL33 1030 aa20.14■□□□□ 0.81
CLCNKA-207ENST00000495784 CD2BP2O95400 341 aaKnown RBP20.14■□□□□ 0.81
CLCNKA-207ENST00000495784 POU2F2P09086 479 aa20.14■□□□□ 0.81
CLCNKA-207ENST00000495784 PLA2G4BP0C869 781 aa20.14■□□□□ 0.81
CLCNKA-207ENST00000495784 RPL9P32969 192 aaKnown RBP20.14■□□□□ 0.81
CLCNKA-207ENST00000495784 SLC12A3P55017 1021 aa20.14■□□□□ 0.81
CLCNKA-207ENST00000495784 NOLC1Q14978 699 aaKnown RBP eCLIP20.14■□□□□ 0.81
CLCNKA-207ENST00000495784 RSPO2Q6UXX9 243 aaPredicted RBP20.14■□□□□ 0.81
CLCNKA-207ENST00000495784 CCDC105Q8IYK2 499 aa20.14■□□□□ 0.81
CLCNKA-207ENST00000495784 DTWD2Q8NBA8 298 aa20.14■□□□□ 0.81
CLCNKA-207ENST00000495784 GPR152Q8TDT2 470 aa20.14■□□□□ 0.81
CLCNKA-207ENST00000495784 FGF13Q92913 245 aa20.14■□□□□ 0.81
CLCNKA-207ENST00000495784 ZBTB45Q96K62 511 aaPredicted RBP20.14■□□□□ 0.81
CLCNKA-207ENST00000495784 CNTN3Q9P232 1028 aa20.14■□□□□ 0.81
CLCNKA-207ENST00000495784 PROB1E7EW31 1015 aa20.13■□□□□ 0.81
CLCNKA-207ENST00000495784 MAPTP10636 758 aaKnown RBP20.13■□□□□ 0.81
CLCNKA-207ENST00000495784 MATR3P43243 847 aaKnown RBP eCLIP20.13■□□□□ 0.81
CLCNKA-207ENST00000495784 PABPC1LQ4VXU2 614 aaKnown RBP20.13■□□□□ 0.81
CLCNKA-207ENST00000495784 VARS2Q5ST30 1063 aaKnown RBP20.13■□□□□ 0.81
CLCNKA-207ENST00000495784 ZPBP2Q6X784 338 aa20.13■□□□□ 0.81
CLCNKA-207ENST00000495784 MTSS1LQ765P7 747 aa20.13■□□□□ 0.81
CLCNKA-207ENST00000495784 ITFG1Q8TB96 612 aa20.13■□□□□ 0.81
CLCNKA-207ENST00000495784 C18orf25Q96B23 403 aaPredicted RBP20.13■□□□□ 0.81
CLCNKA-207ENST00000495784 AK8Q96MA6 479 aa20.13■□□□□ 0.81
CLCNKA-207ENST00000495784 TBC1D17Q9HA65 648 aa20.13■□□□□ 0.81
CLCNKA-207ENST00000495784 ARHGEF3Q9NR81 526 aa20.13■□□□□ 0.81
CLCNKA-207ENST00000495784 SLC2A4RGQ9NR83 387 aa20.13■□□□□ 0.81
CLCNKA-207ENST00000495784 LARSQ9P2J5 1176 aaKnown RBP20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms