RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 ZNF112Q9UJU3 913 aa7.87□□□□□ -1.15
VIM-207ENST00000495528 A0A1B0GUL6 1792 aa7.87□□□□□ -1.15
VIM-207ENST00000495528 OTOFQ9HC10 1997 aa7.86□□□□□ -1.15
VIM-207ENST00000495528 ADGRA2Q96PE1 1338 aa7.86□□□□□ -1.15
VIM-207ENST00000495528 ZNF891A8MT65 544 aaPredicted RBP7.86□□□□□ -1.15
VIM-207ENST00000495528 GSG1L2A8MUP6 293 aa7.86□□□□□ -1.15
VIM-207ENST00000495528 RFXAPO00287 272 aa7.86□□□□□ -1.15
VIM-207ENST00000495528 NUAK1O60285 661 aa7.86□□□□□ -1.15
VIM-207ENST00000495528 CLASP2O75122 1294 aaKnown RBP7.86□□□□□ -1.15
VIM-207ENST00000495528 HIP1RO75146 1068 aa7.86□□□□□ -1.15
VIM-207ENST00000495528 IFIT1P09914 478 aaKnown RBP7.86□□□□□ -1.15
VIM-207ENST00000495528 TCP10Q12799 353 aa7.86□□□□□ -1.15
VIM-207ENST00000495528 TMEM132BQ14DG7 1078 aa7.86□□□□□ -1.15
VIM-207ENST00000495528 SEPT7Q16181 437 aaKnown RBP7.86□□□□□ -1.15
VIM-207ENST00000495528 ZNF385BQ569K4 471 aa7.86□□□□□ -1.15
VIM-207ENST00000495528 PHF19Q5T6S3 580 aa7.86□□□□□ -1.15
VIM-207ENST00000495528 CDC42EP5Q6NZY7 148 aa7.86□□□□□ -1.15
VIM-207ENST00000495528 AHI1Q8N157 1196 aa7.86□□□□□ -1.15
VIM-207ENST00000495528 BOCQ9BWV1 1114 aa7.86□□□□□ -1.15
VIM-207ENST00000495528 USP44Q9H0E7 712 aa7.86□□□□□ -1.15
VIM-207ENST00000495528 NGRNQ9NPE2 291 aaKnown RBP7.86□□□□□ -1.15
VIM-207ENST00000495528 WASF3Q9UPY6 502 aa7.86□□□□□ -1.15
VIM-207ENST00000495528 MAST3O60307 1309 aa7.85□□□□□ -1.15
VIM-207ENST00000495528 RBBP6Q7Z6E9 1792 aaKnown RBP7.85□□□□□ -1.15
VIM-207ENST00000495528 CCL5P13501 91 aa7.85□□□□□ -1.15
VIM-207ENST00000495528 HOXD10P28358 340 aa7.85□□□□□ -1.15
VIM-207ENST00000495528 GJA4P35212 333 aa7.85□□□□□ -1.15
VIM-207ENST00000495528 RFX5P48382 616 aaPredicted RBP7.85□□□□□ -1.15
VIM-207ENST00000495528 ITGA1P56199 1179 aa7.85□□□□□ -1.15
VIM-207ENST00000495528 PUM3Q15397 648 aaKnown RBP7.85□□□□□ -1.15
VIM-207ENST00000495528 VMACQ2NL98 169 aa7.85□□□□□ -1.15
VIM-207ENST00000495528 LIPIQ6XZB0 460 aa7.85□□□□□ -1.15
VIM-207ENST00000495528 UBE2Q1Q7Z7E8 422 aa7.85□□□□□ -1.15
VIM-207ENST00000495528 ZFPM1Q8IX07 1006 aa7.85□□□□□ -1.15
VIM-207ENST00000495528 WDR66Q8TBY9 1149 aa7.85□□□□□ -1.15
VIM-207ENST00000495528 RAET1EQ8TD07 263 aa7.85□□□□□ -1.15
VIM-207ENST00000495528 C11orf84Q9BUA3 381 aaPredicted RBP7.85□□□□□ -1.15
VIM-207ENST00000495528 KRTAP9-9Q9BYP9 154 aa7.85□□□□□ -1.15
VIM-207ENST00000495528 KRTAP9-4Q9BYQ2 154 aa7.85□□□□□ -1.15
VIM-207ENST00000495528 GOLGA2P5Q9HBQ8 144 aa7.85□□□□□ -1.15
VIM-207ENST00000495528 SLC39A2Q9NP94 309 aa7.85□□□□□ -1.15
VIM-207ENST00000495528 USP40Q9NVE5 1235 aa7.85□□□□□ -1.15
VIM-207ENST00000495528 B4GALT6Q9UBX8 382 aa7.85□□□□□ -1.15
VIM-207ENST00000495528 ZKSCAN5Q9Y2L8 839 aa7.85□□□□□ -1.15
VIM-207ENST00000495528 RPAP1Q9BWH6 1393 aaPredicted RBP7.84□□□□□ -1.15
VIM-207ENST00000495528 MYPNQ86TC9 1320 aa7.84□□□□□ -1.15
VIM-207ENST00000495528 KIF16BQ96L93 1317 aa7.84□□□□□ -1.15
VIM-207ENST00000495528 EYA2O00167 538 aa7.84□□□□□ -1.15
VIM-207ENST00000495528 CXCL11O14625 94 aa7.84□□□□□ -1.15
VIM-207ENST00000495528 GAS7O60861 476 aa7.84□□□□□ -1.15
VIM-207ENST00000495528 C4BPAP04003 597 aaKnown RBP7.84□□□□□ -1.15
VIM-207ENST00000495528 GJB1P08034 283 aa7.84□□□□□ -1.15
VIM-207ENST00000495528 SLC5A1P13866 664 aa7.84□□□□□ -1.15
VIM-207ENST00000495528 POU3F2P20265 443 aaPredicted RBP7.84□□□□□ -1.15
VIM-207ENST00000495528 PRDX5P30044 214 aa7.84□□□□□ -1.15
VIM-207ENST00000495528 PRKCZQ05513 592 aa7.84□□□□□ -1.15
VIM-207ENST00000495528 ARHGAP44Q17R89 818 aa7.84□□□□□ -1.15
VIM-207ENST00000495528 CD276Q5ZPR3 534 aa7.84□□□□□ -1.15
VIM-207ENST00000495528 VASNQ6EMK4 673 aa7.84□□□□□ -1.15
VIM-207ENST00000495528 ATG9AQ7Z3C6 839 aa7.84□□□□□ -1.15
VIM-207ENST00000495528 PROSER1Q86XN7 944 aa7.84□□□□□ -1.15
VIM-207ENST00000495528 THNSL2Q86YJ6 484 aa7.84□□□□□ -1.15
VIM-207ENST00000495528 FNIP1Q8TF40 1166 aa7.84□□□□□ -1.15
VIM-207ENST00000495528 LPIN2Q92539 896 aa7.84□□□□□ -1.15
VIM-207ENST00000495528 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.84□□□□□ -1.15
VIM-207ENST00000495528 H2AFY2Q9P0M6 372 aaPredicted RBP7.84□□□□□ -1.15
VIM-207ENST00000495528 GABRQQ9UN88 632 aa7.84□□□□□ -1.15
VIM-207ENST00000495528 ZSWIM8A7E2V4 1837 aa7.84□□□□□ -1.15
VIM-207ENST00000495528 CACNA1FO60840 1977 aa7.84□□□□□ -1.15
VIM-207ENST00000495528 SCNN1BP51168 640 aa7.83□□□□□ -1.16
VIM-207ENST00000495528 AFF3P51826 1226 aaKnown RBP7.83□□□□□ -1.16
VIM-207ENST00000495528 KIF11P52732 1056 aa7.83□□□□□ -1.16
VIM-207ENST00000495528 UBXN2AP68543 259 aa7.83□□□□□ -1.16
VIM-207ENST00000495528 SART3Q15020 963 aaKnown RBP7.83□□□□□ -1.16
VIM-207ENST00000495528 ADGRG2Q8IZP9 1017 aa7.83□□□□□ -1.16
VIM-207ENST00000495528 U2AF1L4Q8WU68 220 aaKnown RBP7.83□□□□□ -1.16
VIM-207ENST00000495528 SSH1Q8WYL5 1049 aa7.83□□□□□ -1.16
VIM-207ENST00000495528 PARK7Q99497 189 aaKnown RBP7.83□□□□□ -1.16
VIM-207ENST00000495528 PRO3102Q9H379 93 aa7.83□□□□□ -1.16
VIM-207ENST00000495528 KCNH7Q9NS40 1196 aa7.83□□□□□ -1.16
VIM-207ENST00000495528 THG1LQ9NWX6 298 aaKnown RBP7.83□□□□□ -1.16
VIM-207ENST00000495528 ARHGAP28Q9P2N2 729 aa7.83□□□□□ -1.16
VIM-207ENST00000495528 B3GALT1Q9Y5Z6 326 aa7.83□□□□□ -1.16
VIM-207ENST00000495528 ZHX2Q9Y6X8 837 aa7.83□□□□□ -1.16
VIM-207ENST00000495528 ARAP2Q8WZ64 1704 aa7.83□□□□□ -1.16
VIM-207ENST00000495528 TRIOBPQ9H2D6 2365 aa7.83□□□□□ -1.16
VIM-207ENST00000495528 A0A0G2JLL6 359 aaPredicted RBP7.82□□□□□ -1.16
VIM-207ENST00000495528 DVL2O14641 736 aa7.82□□□□□ -1.16
VIM-207ENST00000495528 SGPL1O95470 568 aa7.82□□□□□ -1.16
VIM-207ENST00000495528 F2P00734 622 aa7.82□□□□□ -1.16
VIM-207ENST00000495528 MMEP08473 750 aa7.82□□□□□ -1.16
VIM-207ENST00000495528 ATP2A2P16615 1042 aaKnown RBP7.82□□□□□ -1.16
VIM-207ENST00000495528 CNGA1P29973 690 aa7.82□□□□□ -1.16
VIM-207ENST00000495528 GLRBP48167 497 aa7.82□□□□□ -1.16
VIM-207ENST00000495528 RGS3P49796 1198 aa7.82□□□□□ -1.16
VIM-207ENST00000495528 PFKPQ01813 784 aa7.82□□□□□ -1.16
VIM-207ENST00000495528 DBPQ10586 325 aaPredicted RBP7.82□□□□□ -1.16
VIM-207ENST00000495528 ADAM9Q13443 819 aa7.82□□□□□ -1.16
VIM-207ENST00000495528 CT47A1Q5JQC4 288 aaPredicted RBP7.82□□□□□ -1.16
VIM-207ENST00000495528 FASTKD5Q7L8L6 764 aaKnown RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms