RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 CYP3A5P20815 502 aa18.56■□□□□ 0.56
HDAC6-235ENST00000495515 OR1G1P47890 313 aa18.56■□□□□ 0.56
HDAC6-235ENST00000495515 FKBP3Q00688 224 aaKnown RBP18.56■□□□□ 0.56
HDAC6-235ENST00000495515 KRT17Q04695 432 aa18.56■□□□□ 0.56
HDAC6-235ENST00000495515 TMEM132DQ14C87 1099 aa18.56■□□□□ 0.56
HDAC6-235ENST00000495515 CEP135Q66GS9 1140 aa18.56■□□□□ 0.56
HDAC6-235ENST00000495515 USP37Q86T82 979 aa18.56■□□□□ 0.56
HDAC6-235ENST00000495515 RDH13Q8NBN7 331 aa18.56■□□□□ 0.56
HDAC6-235ENST00000495515 BEST2Q8NFU1 509 aa18.56■□□□□ 0.56
HDAC6-235ENST00000495515 DDX27Q96GQ7 796 aaKnown RBP18.56■□□□□ 0.56
HDAC6-235ENST00000495515 ZMAT2Q96NC0 199 aaKnown RBP18.56■□□□□ 0.56
HDAC6-235ENST00000495515 COLEC11Q9BWP8 271 aa18.56■□□□□ 0.56
HDAC6-235ENST00000495515 CERS4Q9HA82 394 aa18.56■□□□□ 0.56
HDAC6-235ENST00000495515 TMEM63CQ9P1W3 806 aa18.56■□□□□ 0.56
HDAC6-235ENST00000495515 HCSTQ9UBK5 93 aa18.56■□□□□ 0.56
HDAC6-235ENST00000495515 DNAJB4Q9UDY4 337 aa18.56■□□□□ 0.56
HDAC6-235ENST00000495515 STK39Q9UEW8 545 aa18.56■□□□□ 0.56
HDAC6-235ENST00000495515 MAPK13O15264 365 aa18.55■□□□□ 0.56
HDAC6-235ENST00000495515 RPL9P32969 192 aaKnown RBP18.55■□□□□ 0.56
HDAC6-235ENST00000495515 SLC11A1P49279 550 aa18.55■□□□□ 0.56
HDAC6-235ENST00000495515 CT47A1Q5JQC4 288 aaPredicted RBP18.55■□□□□ 0.56
HDAC6-235ENST00000495515 ANKRD40Q6AI12 368 aa18.55■□□□□ 0.56
HDAC6-235ENST00000495515 ZSWIM2Q8NEG5 633 aa18.55■□□□□ 0.56
HDAC6-235ENST00000495515 CACTINQ8WUQ7 758 aaKnown RBP18.55■□□□□ 0.56
HDAC6-235ENST00000495515 TMEM169Q96HH4 297 aa18.55■□□□□ 0.56
HDAC6-235ENST00000495515 FNBP1Q96RU3 617 aa18.55■□□□□ 0.56
HDAC6-235ENST00000495515 CXCL16Q9H2A7 254 aa18.55■□□□□ 0.56
HDAC6-235ENST00000495515 TTYH1Q9H313 450 aaPredicted RBP18.55■□□□□ 0.56
HDAC6-235ENST00000495515 PUF60Q9UHX1 559 aaKnown RBP18.55■□□□□ 0.56
HDAC6-235ENST00000495515 CTNND2Q9UQB3 1225 aa18.55■□□□□ 0.56
HDAC6-235ENST00000495515 CASTOR2A6NHX0 329 aa18.54■□□□□ 0.56
HDAC6-235ENST00000495515 H3BNC9 293 aa18.54■□□□□ 0.56
HDAC6-235ENST00000495515 NRP1O14786 923 aa18.54■□□□□ 0.56
HDAC6-235ENST00000495515 MEFVO15553 781 aaPredicted RBP18.54■□□□□ 0.56
HDAC6-235ENST00000495515 FGFR1OPO95684 399 aaKnown RBP18.54■□□□□ 0.56
HDAC6-235ENST00000495515 PSMC2P35998 433 aaKnown RBP18.54■□□□□ 0.56
HDAC6-235ENST00000495515 UBE3AQ05086 875 aa18.54■□□□□ 0.56
HDAC6-235ENST00000495515 SPAG1Q07617 926 aa18.54■□□□□ 0.56
HDAC6-235ENST00000495515 CYP24A1Q07973 514 aa18.54■□□□□ 0.56
HDAC6-235ENST00000495515 GPM6BQ13491 265 aa18.54■□□□□ 0.56
HDAC6-235ENST00000495515 PSMD6Q15008 389 aa18.54■□□□□ 0.56
HDAC6-235ENST00000495515 NFKBIBQ15653 356 aa18.54■□□□□ 0.56
HDAC6-235ENST00000495515 NAB2Q15742 525 aa18.54■□□□□ 0.56
HDAC6-235ENST00000495515 JADE1Q6IE81 842 aa18.54■□□□□ 0.56
HDAC6-235ENST00000495515 SLC39A11Q8N1S5 342 aa18.54■□□□□ 0.56
HDAC6-235ENST00000495515 DEFB123Q8N688 67 aa18.54■□□□□ 0.56
HDAC6-235ENST00000495515 KLHL23Q8NBE8 558 aa18.54■□□□□ 0.56
HDAC6-235ENST00000495515 MFSD14AQ96MC6 490 aa18.54■□□□□ 0.56
HDAC6-235ENST00000495515 MKNK1Q9BUB5 465 aa18.54■□□□□ 0.56
HDAC6-235ENST00000495515 ANO10Q9NW15 660 aa18.54■□□□□ 0.56
HDAC6-235ENST00000495515 RWDD2AQ9UIY3 292 aa18.54■□□□□ 0.56
HDAC6-235ENST00000495515 PRG3Q9Y2Y8 225 aaPredicted RBP18.54■□□□□ 0.56
HDAC6-235ENST00000495515 FNDC1Q4ZHG4 1894 aaPredicted RBP18.54■□□□□ 0.56
HDAC6-235ENST00000495515 FGF18O76093 207 aa18.53■□□□□ 0.56
HDAC6-235ENST00000495515 NFICP08651 508 aa18.53■□□□□ 0.56
HDAC6-235ENST00000495515 EPB41P11171 864 aaKnown RBP18.53■□□□□ 0.56
HDAC6-235ENST00000495515 KRT13P13646 458 aa18.53■□□□□ 0.56
HDAC6-235ENST00000495515 TFAMQ00059 246 aaKnown RBP18.53■□□□□ 0.56
HDAC6-235ENST00000495515 PLCB3Q01970 1234 aa18.53■□□□□ 0.56
HDAC6-235ENST00000495515 ZBTB6Q15916 424 aa18.53■□□□□ 0.56
HDAC6-235ENST00000495515 SPATA1Q5VX52 437 aa18.53■□□□□ 0.56
HDAC6-235ENST00000495515 INTS8Q75QN2 995 aaKnown RBP18.53■□□□□ 0.56
HDAC6-235ENST00000495515 Q7L0L9 218 aa18.53■□□□□ 0.56
HDAC6-235ENST00000495515 FAM186BQ8IYM0 893 aa18.53■□□□□ 0.56
HDAC6-235ENST00000495515 IGSF21Q96ID5 467 aa18.53■□□□□ 0.56
HDAC6-235ENST00000495515 CEP63Q96MT8 703 aa18.53■□□□□ 0.56
HDAC6-235ENST00000495515 PDE11AQ9HCR9 933 aa18.53■□□□□ 0.56
HDAC6-235ENST00000495515 LZTS1Q9Y250 596 aa18.53■□□□□ 0.56
HDAC6-235ENST00000495515 TRIM49BA6NDI0 452 aa18.52■□□□□ 0.56
HDAC6-235ENST00000495515 NT5C1B-RDH14C9J2C7 533 aa18.52■□□□□ 0.56
HDAC6-235ENST00000495515 SLC16A3O15427 465 aaKnown RBP18.52■□□□□ 0.56
HDAC6-235ENST00000495515 B4GALT3O60512 393 aa18.52■□□□□ 0.56
HDAC6-235ENST00000495515 TADA2AO75478 443 aa18.52■□□□□ 0.56
HDAC6-235ENST00000495515 TMEM191BP0C7N4 346 aa18.52■□□□□ 0.56
HDAC6-235ENST00000495515 ERCC5P28715 1186 aaPredicted RBP18.52■□□□□ 0.56
HDAC6-235ENST00000495515 PBX3P40426 434 aa18.52■□□□□ 0.56
HDAC6-235ENST00000495515 CASP4P49662 377 aa18.52■□□□□ 0.56
HDAC6-235ENST00000495515 PMS1P54277 932 aaKnown RBP18.52■□□□□ 0.56
HDAC6-235ENST00000495515 BMS1Q14692 1282 aaKnown RBP18.52■□□□□ 0.56
HDAC6-235ENST00000495515 STX1AQ16623 288 aa18.52■□□□□ 0.56
HDAC6-235ENST00000495515 PTPROQ16827 1216 aa18.52■□□□□ 0.56
HDAC6-235ENST00000495515 DUOXA2Q1HG44 320 aa18.52■□□□□ 0.56
HDAC6-235ENST00000495515 DPCR1Q3MIW9 517 aa18.52■□□□□ 0.56
HDAC6-235ENST00000495515 TTI2Q6NXR4 508 aa18.52■□□□□ 0.56
HDAC6-235ENST00000495515 DCLRE1AQ6PJP8 1040 aa18.52■□□□□ 0.56
HDAC6-235ENST00000495515 SPRED2Q7Z698 418 aa18.52■□□□□ 0.56
HDAC6-235ENST00000495515 WDR49Q8IV35 697 aa18.52■□□□□ 0.56
HDAC6-235ENST00000495515 CSGALNACT2Q8N6G5 542 aa18.52■□□□□ 0.56
HDAC6-235ENST00000495515 C18orf25Q96B23 403 aaPredicted RBP18.52■□□□□ 0.56
HDAC6-235ENST00000495515 CCDC127Q96BQ5 260 aa18.52■□□□□ 0.56
HDAC6-235ENST00000495515 ANKRD36BP1Q96IX9 119 aa18.52■□□□□ 0.56
HDAC6-235ENST00000495515 LMAN2LQ9H0V9 348 aa18.52■□□□□ 0.56
HDAC6-235ENST00000495515 R3HCC1Q9Y3T6 440 aaKnown RBP18.52■□□□□ 0.56
HDAC6-235ENST00000495515 GBF1Q92538 1859 aa18.52■□□□□ 0.55
HDAC6-235ENST00000495515 PODXLO00592 558 aa18.51■□□□□ 0.55
HDAC6-235ENST00000495515 AKAP3O75969 853 aa18.51■□□□□ 0.55
HDAC6-235ENST00000495515 B3GAT3O94766 335 aa18.51■□□□□ 0.55
HDAC6-235ENST00000495515 TNNC2P02585 160 aa18.51■□□□□ 0.55
HDAC6-235ENST00000495515 ITGB1P05556 798 aa18.51■□□□□ 0.55
HDAC6-235ENST00000495515 DLATP10515 647 aaKnown RBP18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms