RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 INTUQ9ULD6 942 aa11.07□□□□□ -0.64
HDAC3-214ENST00000495485 AKT3Q9Y243 479 aa11.07□□□□□ -0.64
HDAC3-214ENST00000495485 SQORQ9Y6N5 450 aa11.07□□□□□ -0.64
HDAC3-214ENST00000495485 LTBP2Q14767 1821 aa11.07□□□□□ -0.64
HDAC3-214ENST00000495485 ADGRA3Q8IWK6 1321 aa11.07□□□□□ -0.64
HDAC3-214ENST00000495485 SMIM35A0A1B0GVV1 85 aa11.06□□□□□ -0.64
HDAC3-214ENST00000495485 ANO9A1A5B4 782 aa11.06□□□□□ -0.64
HDAC3-214ENST00000495485 LRRIQ3A6PVS8 624 aaPredicted RBP11.06□□□□□ -0.64
HDAC3-214ENST00000495485 ZBTB42B2RXF5 422 aa11.06□□□□□ -0.64
HDAC3-214ENST00000495485 PJA2O43164 708 aa11.06□□□□□ -0.64
HDAC3-214ENST00000495485 PHACTR2O75167 634 aa11.06□□□□□ -0.64
HDAC3-214ENST00000495485 IL18RAPO95256 599 aa11.06□□□□□ -0.64
HDAC3-214ENST00000495485 C22orf31O95567 290 aa11.06□□□□□ -0.64
HDAC3-214ENST00000495485 DLATP10515 647 aaKnown RBP11.06□□□□□ -0.64
HDAC3-214ENST00000495485 RAG1P15918 1043 aa11.06□□□□□ -0.64
HDAC3-214ENST00000495485 TNFAIP3P21580 790 aa11.06□□□□□ -0.64
HDAC3-214ENST00000495485 NAP1L1P55209 391 aaKnown RBP11.06□□□□□ -0.64
HDAC3-214ENST00000495485 BPIFB4P59827 614 aa11.06□□□□□ -0.64
HDAC3-214ENST00000495485 IGBP1P78318 339 aa11.06□□□□□ -0.64
HDAC3-214ENST00000495485 CLDN10P78369 228 aa11.06□□□□□ -0.64
HDAC3-214ENST00000495485 ARID5AQ03989 594 aa11.06□□□□□ -0.64
HDAC3-214ENST00000495485 HGSNATQ68CP4 663 aa11.06□□□□□ -0.64
HDAC3-214ENST00000495485 IQCEQ6IPM2 695 aa11.06□□□□□ -0.64
HDAC3-214ENST00000495485 GDF6Q6KF10 455 aaPredicted RBP11.06□□□□□ -0.64
HDAC3-214ENST00000495485 MFSD5Q6N075 450 aa11.06□□□□□ -0.64
HDAC3-214ENST00000495485 SLC39A4Q6P5W5 647 aa11.06□□□□□ -0.64
HDAC3-214ENST00000495485 MTHFD1LQ6UB35 978 aa11.06□□□□□ -0.64
HDAC3-214ENST00000495485 TSHZ1Q6ZSZ6 1077 aa11.06□□□□□ -0.64
HDAC3-214ENST00000495485 TAS1R3Q7RTX0 852 aa11.06□□□□□ -0.64
HDAC3-214ENST00000495485 IFNLR1Q8IU57 520 aaPredicted RBP11.06□□□□□ -0.64
HDAC3-214ENST00000495485 RPUSD2Q8IZ73 545 aaKnown RBP11.06□□□□□ -0.64
HDAC3-214ENST00000495485 LRRC71Q8N4P6 559 aa11.06□□□□□ -0.64
HDAC3-214ENST00000495485 CEP112Q8N8E3 955 aa11.06□□□□□ -0.64
HDAC3-214ENST00000495485 DHX38Q92620 1227 aaKnown RBP11.06□□□□□ -0.64
HDAC3-214ENST00000495485 NLRP4Q96MN2 994 aa11.06□□□□□ -0.64
HDAC3-214ENST00000495485 SCLT1Q96NL6 688 aa11.06□□□□□ -0.64
HDAC3-214ENST00000495485 ACO2Q99798 780 aaKnown RBP11.06□□□□□ -0.64
HDAC3-214ENST00000495485 ADPGKQ9BRR6 497 aa11.06□□□□□ -0.64
HDAC3-214ENST00000495485 TARS2Q9BW92 718 aaKnown RBP11.06□□□□□ -0.64
HDAC3-214ENST00000495485 TMEM117Q9H0C3 514 aa11.06□□□□□ -0.64
HDAC3-214ENST00000495485 IKZF4Q9H2S9 585 aa11.06□□□□□ -0.64
HDAC3-214ENST00000495485 HIPK3Q9H422 1215 aa11.06□□□□□ -0.64
HDAC3-214ENST00000495485 L2HGDHQ9H9P8 463 aa11.06□□□□□ -0.64
HDAC3-214ENST00000495485 SIX2Q9NPC8 291 aa11.06□□□□□ -0.64
HDAC3-214ENST00000495485 UBE2TQ9NPD8 197 aaPredicted RBP11.06□□□□□ -0.64
HDAC3-214ENST00000495485 C1orf112Q9NSG2 853 aa11.06□□□□□ -0.64
HDAC3-214ENST00000495485 ANKFY1Q9P2R3 1169 aa11.06□□□□□ -0.64
HDAC3-214ENST00000495485 BTNL10A8MVZ5 291 aa11.05□□□□□ -0.64
HDAC3-214ENST00000495485 TISP43B9A030 160 aa11.05□□□□□ -0.64
HDAC3-214ENST00000495485 F8VZ95 297 aa11.05□□□□□ -0.64
HDAC3-214ENST00000495485 M0QZ92 97 aa11.05□□□□□ -0.64
HDAC3-214ENST00000495485 EFCAB14O75071 495 aa11.05□□□□□ -0.64
HDAC3-214ENST00000495485 ERLIN2O94905 339 aa11.05□□□□□ -0.64
HDAC3-214ENST00000495485 ADRB2P07550 413 aa11.05□□□□□ -0.64
HDAC3-214ENST00000495485 TBXAS1P24557 533 aaPredicted RBP11.05□□□□□ -0.64
HDAC3-214ENST00000495485 BMP8BP34820 402 aa11.05□□□□□ -0.64
HDAC3-214ENST00000495485 DLG4P78352 724 aa11.05□□□□□ -0.64
HDAC3-214ENST00000495485 GCNT1Q02742 428 aa11.05□□□□□ -0.64
HDAC3-214ENST00000495485 MCL1Q07820 350 aa11.05□□□□□ -0.64
HDAC3-214ENST00000495485 PPP3CAQ08209 521 aa11.05□□□□□ -0.64
HDAC3-214ENST00000495485 PPIGQ13427 754 aaKnown RBP eCLIP11.05□□□□□ -0.641e-6■■□□□ 13.3
HDAC3-214ENST00000495485 NAB2Q15742 525 aa11.05□□□□□ -0.64
HDAC3-214ENST00000495485 ASTE1Q2TB18 679 aaPredicted RBP11.05□□□□□ -0.64
HDAC3-214ENST00000495485 ATF7IP2Q5U623 682 aa11.05□□□□□ -0.64
HDAC3-214ENST00000495485 PPP1R2P3Q6NXS1 205 aa11.05□□□□□ -0.64
HDAC3-214ENST00000495485 MPZL3Q6UWV2 235 aa11.05□□□□□ -0.64
HDAC3-214ENST00000495485 IRF2BP2Q7Z5L9 587 aa11.05□□□□□ -0.64
HDAC3-214ENST00000495485 USP38Q8NB14 1042 aa11.05□□□□□ -0.64
HDAC3-214ENST00000495485 NOX5Q96PH1 765 aa11.05□□□□□ -0.64
HDAC3-214ENST00000495485 CGRRF1Q99675 332 aa11.05□□□□□ -0.64
HDAC3-214ENST00000495485 CCDC113Q9H0I3 377 aa11.05□□□□□ -0.64
HDAC3-214ENST00000495485 FZD8Q9H461 694 aa11.05□□□□□ -0.64
HDAC3-214ENST00000495485 ADAMTS1Q9UHI8 967 aa11.05□□□□□ -0.64
HDAC3-214ENST00000495485 TNFSF13BQ9Y275 285 aa11.05□□□□□ -0.64
HDAC3-214ENST00000495485 TNNC2P02585 160 aa11.04□□□□□ -0.64
HDAC3-214ENST00000495485 PLEKP08567 350 aaPredicted RBP11.04□□□□□ -0.64
HDAC3-214ENST00000495485 MCF2P10911 925 aa11.04□□□□□ -0.64
HDAC3-214ENST00000495485 SELPP16109 830 aa11.04□□□□□ -0.64
HDAC3-214ENST00000495485 ARHGAP25P42331 645 aa11.04□□□□□ -0.64
HDAC3-214ENST00000495485 PIK3CAP42336 1068 aa11.04□□□□□ -0.64
HDAC3-214ENST00000495485 CLCN3P51790 818 aa11.04□□□□□ -0.64
HDAC3-214ENST00000495485 YWHAEP62258 255 aaKnown RBP11.04□□□□□ -0.64
HDAC3-214ENST00000495485 CYP27A1Q02318 531 aa11.04□□□□□ -0.64
HDAC3-214ENST00000495485 PTK2Q05397 1052 aa11.04□□□□□ -0.64
HDAC3-214ENST00000495485 BIRC3Q13489 604 aa11.04□□□□□ -0.64
HDAC3-214ENST00000495485 ARHGAP44Q17R89 818 aa11.04□□□□□ -0.64
HDAC3-214ENST00000495485 PHLDB3Q6NSJ2 640 aa11.04□□□□□ -0.64
HDAC3-214ENST00000495485 DPY19L2P1Q6NXN4 242 aa11.04□□□□□ -0.64
HDAC3-214ENST00000495485 ALKBH5Q6P6C2 394 aaKnown RBP11.04□□□□□ -0.64
HDAC3-214ENST00000495485 PSRC1Q6PGN9 363 aaPredicted RBP11.04□□□□□ -0.64
HDAC3-214ENST00000495485 SV2AQ7L0J3 742 aa11.04□□□□□ -0.64
HDAC3-214ENST00000495485 WDR49Q8IV35 697 aa11.04□□□□□ -0.64
HDAC3-214ENST00000495485 BRSK2Q8IWQ3 736 aa11.04□□□□□ -0.64
HDAC3-214ENST00000495485 CD302Q8IX05 232 aa11.04□□□□□ -0.64
HDAC3-214ENST00000495485 SLC35F6Q8N357 371 aa11.04□□□□□ -0.64
HDAC3-214ENST00000495485 PPM1KQ8N3J5 372 aa11.04□□□□□ -0.64
HDAC3-214ENST00000495485 TET1Q8NFU7 2136 aa11.04□□□□□ -0.64
HDAC3-214ENST00000495485 LMO3Q8TAP4 145 aa11.04□□□□□ -0.64
HDAC3-214ENST00000495485 NLRP7Q8WX94 980 aa11.04□□□□□ -0.64
HDAC3-214ENST00000495485 ANKRD36BP1Q96IX9 119 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms