RNA–Protein interactions for RNA: ENST00000495039.1

VPS50-219, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 1,115 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-219ENST00000495039 ADSLP30566 484 aaPredicted RBP5.67□□□□□ -1.5
VPS50-219ENST00000495039 VAV2P52735 878 aa5.67□□□□□ -1.5
VPS50-219ENST00000495039 CYP2A13Q16696 494 aa5.67□□□□□ -1.5
VPS50-219ENST00000495039 UGT8Q16880 541 aa5.67□□□□□ -1.5
VPS50-219ENST00000495039 LCE1AQ5T7P2 110 aa5.67□□□□□ -1.5
VPS50-219ENST00000495039 AFMIDQ63HM1 303 aa5.67□□□□□ -1.5
VPS50-219ENST00000495039 ZNF788Q6ZQV5 615 aa5.67□□□□□ -1.5
VPS50-219ENST00000495039 PTF1AQ7RTS3 328 aa5.67□□□□□ -1.5
VPS50-219ENST00000495039 LNX2Q8N448 690 aa5.67□□□□□ -1.5
VPS50-219ENST00000495039 RIN2Q8WYP3 895 aaPredicted RBP5.67□□□□□ -1.5
VPS50-219ENST00000495039 NACC2Q96BF6 587 aa5.67□□□□□ -1.5
VPS50-219ENST00000495039 UNKLQ9H9P5 680 aaKnown RBP5.67□□□□□ -1.5
VPS50-219ENST00000495039 FAM30AQ9NZY2 134 aa5.67□□□□□ -1.5
VPS50-219ENST00000495039 MTO1Q9Y2Z2 717 aaKnown RBP5.67□□□□□ -1.5
VPS50-219ENST00000495039 ECHS1P30084 290 aa5.66□□□□□ -1.5
VPS50-219ENST00000495039 PROK1P58294 105 aa5.66□□□□□ -1.5
VPS50-219ENST00000495039 FSCN1Q16658 493 aaKnown RBP5.66□□□□□ -1.5
VPS50-219ENST00000495039 FAM180AQ6UWF9 173 aa5.66□□□□□ -1.5
VPS50-219ENST00000495039 GRASPQ7Z6J2 395 aaPredicted RBP5.66□□□□□ -1.5
VPS50-219ENST00000495039 HOMER1Q86YM7 354 aa5.66□□□□□ -1.5
VPS50-219ENST00000495039 NIM1KQ8IY84 436 aa5.66□□□□□ -1.5
VPS50-219ENST00000495039 GPR156Q8NFN8 814 aa5.66□□□□□ -1.5
VPS50-219ENST00000495039 FBXO18Q8NFZ0 1043 aa5.66□□□□□ -1.5
VPS50-219ENST00000495039 EAF2Q96CJ1 260 aaPredicted RBP5.66□□□□□ -1.5
VPS50-219ENST00000495039 RAX2Q96IS3 184 aa5.66□□□□□ -1.5
VPS50-219ENST00000495039 ZNF778Q96MU6 729 aa5.66□□□□□ -1.5
VPS50-219ENST00000495039 UHRF1Q96T88 793 aaPredicted RBP5.66□□□□□ -1.5
VPS50-219ENST00000495039 TARS2Q9BW92 718 aaKnown RBP5.66□□□□□ -1.5
VPS50-219ENST00000495039 USP25Q9UHP3 1055 aa5.66□□□□□ -1.5
VPS50-219ENST00000495039 AATKQ6ZMQ8 1374 aa5.66□□□□□ -1.5
VPS50-219ENST00000495039 ORC4O43929 436 aa5.65□□□□□ -1.5
VPS50-219ENST00000495039 PEX1O43933 1283 aa5.65□□□□□ -1.5
VPS50-219ENST00000495039 IL2RBP14784 551 aa5.65□□□□□ -1.5
VPS50-219ENST00000495039 MAPK7Q13164 816 aa5.65□□□□□ -1.5
VPS50-219ENST00000495039 UBXN2BQ14CS0 331 aa5.65□□□□□ -1.5
VPS50-219ENST00000495039 Q6ZVL8 140 aa5.65□□□□□ -1.5
VPS50-219ENST00000495039 C16orf86Q6ZW13 317 aa5.65□□□□□ -1.5
VPS50-219ENST00000495039 C9orf106Q8NAJ2 232 aa5.65□□□□□ -1.5
VPS50-219ENST00000495039 ZSWIM4Q9H7M6 989 aa5.65□□□□□ -1.5
VPS50-219ENST00000495039 IL17RBQ9NRM6 502 aa5.65□□□□□ -1.5
VPS50-219ENST00000495039 ZNF70Q9UC06 446 aaPredicted RBP5.65□□□□□ -1.5
VPS50-219ENST00000495039 ARHGEF17Q96PE2 2063 aaPredicted RBP5.64□□□□□ -1.51
VPS50-219ENST00000495039 CCDC78A2IDD5 438 aa5.64□□□□□ -1.51
VPS50-219ENST00000495039 ERN1O75460 977 aaKnown RBP5.64□□□□□ -1.51
VPS50-219ENST00000495039 PDCD1Q15116 288 aa5.64□□□□□ -1.51
VPS50-219ENST00000495039 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.64□□□□□ -1.51
VPS50-219ENST00000495039 KIAA1614Q5VZ46 1190 aa5.64□□□□□ -1.51
VPS50-219ENST00000495039 ZNF366Q8N895 744 aa5.64□□□□□ -1.51
VPS50-219ENST00000495039 Q8N9P0 234 aaPredicted RBP5.64□□□□□ -1.51
VPS50-219ENST00000495039 SSH3Q8TE77 659 aa5.64□□□□□ -1.51
VPS50-219ENST00000495039 ACAP3Q96P50 834 aa5.64□□□□□ -1.51
VPS50-219ENST00000495039 TIMP4Q99727 224 aa5.64□□□□□ -1.51
VPS50-219ENST00000495039 DPP7Q9UHL4 492 aa5.64□□□□□ -1.51
VPS50-219ENST00000495039 EDARQ9UNE0 448 aa5.64□□□□□ -1.51
VPS50-219ENST00000495039 SIK3Q9Y2K2 1263 aa5.64□□□□□ -1.51
VPS50-219ENST00000495039 CCDC151A5D8V7 595 aa5.63□□□□□ -1.51
VPS50-219ENST00000495039 WNT10BO00744 389 aa5.63□□□□□ -1.51
VPS50-219ENST00000495039 ZFPL1O95159 310 aa5.63□□□□□ -1.51
VPS50-219ENST00000495039 GPD1P21695 349 aa5.63□□□□□ -1.51
VPS50-219ENST00000495039 ENPP1P22413 925 aa5.63□□□□□ -1.51
VPS50-219ENST00000495039 SREBF1P36956 1147 aa5.63□□□□□ -1.51
VPS50-219ENST00000495039 FOLR3P41439 243 aa5.63□□□□□ -1.51
VPS50-219ENST00000495039 PER3P56645 1201 aa5.63□□□□□ -1.51
VPS50-219ENST00000495039 CDK17Q00537 523 aa5.63□□□□□ -1.51
VPS50-219ENST00000495039 ATP13A4Q4VNC1 1196 aa5.63□□□□□ -1.51
VPS50-219ENST00000495039 OTUD7BQ6GQQ9 843 aa5.63□□□□□ -1.51
VPS50-219ENST00000495039 ZNF529Q6P280 563 aa5.63□□□□□ -1.51
VPS50-219ENST00000495039 PQLC1Q8N2U9 271 aa5.63□□□□□ -1.51
VPS50-219ENST00000495039 SARAFQ96BY9 339 aa5.63□□□□□ -1.51
VPS50-219ENST00000495039 SENP6Q9GZR1 1112 aaPredicted RBP5.63□□□□□ -1.51
VPS50-219ENST00000495039 LANCL2Q9NS86 450 aa5.63□□□□□ -1.51
VPS50-219ENST00000495039 ENTPD2Q9Y5L3 495 aa5.63□□□□□ -1.51
VPS50-219ENST00000495039 TRGV11A0A075B6L2 103 aa5.62□□□□□ -1.51
VPS50-219ENST00000495039 IKBKBO14920 756 aa5.62□□□□□ -1.51
VPS50-219ENST00000495039 CKBP12277 381 aa5.62□□□□□ -1.51
VPS50-219ENST00000495039 WT1P19544 449 aaPredicted RBP5.62□□□□□ -1.51
VPS50-219ENST00000495039 SLC6A2P23975 617 aa5.62□□□□□ -1.51
VPS50-219ENST00000495039 GEN1Q17RS7 908 aa5.62□□□□□ -1.51
VPS50-219ENST00000495039 TKFCQ3LXA3 575 aa5.62□□□□□ -1.51
VPS50-219ENST00000495039 NPM2Q86SE8 214 aaKnown RBP5.62□□□□□ -1.51
VPS50-219ENST00000495039 DHX37Q8IY37 1157 aaKnown RBP5.62□□□□□ -1.51
VPS50-219ENST00000495039 MED15Q96RN5 788 aa5.62□□□□□ -1.51
VPS50-219ENST00000495039 FEZ1Q99689 392 aa5.62□□□□□ -1.51
VPS50-219ENST00000495039 CPNE5Q9HCH3 593 aa5.62□□□□□ -1.51
VPS50-219ENST00000495039 WDR91A4D1P6 747 aa5.61□□□□□ -1.51
VPS50-219ENST00000495039 WIPF3A6NGB9 483 aa5.61□□□□□ -1.51
VPS50-219ENST00000495039 PRSS23O95084 383 aa5.61□□□□□ -1.51
VPS50-219ENST00000495039 GUCY1A2P33402 732 aa5.61□□□□□ -1.51
VPS50-219ENST00000495039 ALDH1A3P47895 512 aa5.61□□□□□ -1.51
VPS50-219ENST00000495039 APPBP2Q92624 585 aa5.61□□□□□ -1.51
VPS50-219ENST00000495039 PNKPQ96T60 521 aa5.61□□□□□ -1.51
VPS50-219ENST00000495039 TOPORSQ9NS56 1045 aaPredicted RBP5.61□□□□□ -1.51
VPS50-219ENST00000495039 FBXO34Q9NWN3 711 aa5.61□□□□□ -1.51
VPS50-219ENST00000495039 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.6□□□□□ -1.51
VPS50-219ENST00000495039 GSG1L2A8MUP6 293 aa5.6□□□□□ -1.51
VPS50-219ENST00000495039 TEX33O43247 280 aa5.6□□□□□ -1.51
VPS50-219ENST00000495039 ALAS1P13196 640 aa5.6□□□□□ -1.51
VPS50-219ENST00000495039 SF3B3Q15393 1217 aaKnown RBP5.6□□□□□ -1.51
VPS50-219ENST00000495039 ADRM1Q16186 407 aa5.6□□□□□ -1.51
VPS50-219ENST00000495039 KIAA0895LQ68EN5 471 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms