RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 STK4Q13043 487 aa18.66■□□□□ 0.58
SNX17-209ENST00000494893 ZBTB6Q15916 424 aa18.66■□□□□ 0.58
SNX17-209ENST00000494893 KMT5BQ4FZB7 885 aa18.66■□□□□ 0.58
SNX17-209ENST00000494893 PDE12Q6L8Q7 609 aaKnown RBP18.66■□□□□ 0.58
SNX17-209ENST00000494893 MRPL43Q8N983 215 aaKnown RBP18.66■□□□□ 0.58
SNX17-209ENST00000494893 C3orf58Q8NDZ4 430 aa18.66■□□□□ 0.58
SNX17-209ENST00000494893 HASPINQ8TF76 798 aa18.66■□□□□ 0.58
SNX17-209ENST00000494893 PABPC5Q96DU9 382 aaKnown RBP18.66■□□□□ 0.58
SNX17-209ENST00000494893 CBWD1Q9BRT8 395 aa18.66■□□□□ 0.58
SNX17-209ENST00000494893 HERC2P3Q9BVR0 1158 aa18.66■□□□□ 0.58
SNX17-209ENST00000494893 COLEC11Q9BWP8 271 aa18.66■□□□□ 0.58
SNX17-209ENST00000494893 IGFLR1Q9H665 355 aa18.66■□□□□ 0.58
SNX17-209ENST00000494893 SLC39A2Q9NP94 309 aa18.66■□□□□ 0.58
SNX17-209ENST00000494893 NGRNQ9NPE2 291 aaKnown RBP18.66■□□□□ 0.58
SNX17-209ENST00000494893 THEGQ9P2T0 379 aa18.66■□□□□ 0.58
SNX17-209ENST00000494893 ADAM28Q9UKQ2 775 aa18.66■□□□□ 0.58
SNX17-209ENST00000494893 AGO2Q9UKV8 859 aaKnown RBP18.66■□□□□ 0.58
SNX17-209ENST00000494893 EXOC7Q9UPT5 735 aa18.66■□□□□ 0.58
SNX17-209ENST00000494893 TGFB1I1O43294 461 aa18.65■□□□□ 0.58
SNX17-209ENST00000494893 CXCL14O95715 111 aa18.65■□□□□ 0.58
SNX17-209ENST00000494893 GLP2RO95838 553 aa18.65■□□□□ 0.58
SNX17-209ENST00000494893 SOD2P04179 222 aa18.65■□□□□ 0.58
SNX17-209ENST00000494893 CLCNKBP51801 687 aa18.65■□□□□ 0.58
SNX17-209ENST00000494893 ADAM15Q13444 863 aa18.65■□□□□ 0.58
SNX17-209ENST00000494893 KCNC3Q14003 757 aa18.65■□□□□ 0.58
SNX17-209ENST00000494893 PTPN14Q15678 1187 aa18.65■□□□□ 0.58
SNX17-209ENST00000494893 DUSP6Q16828 381 aa18.65■□□□□ 0.58
SNX17-209ENST00000494893 SLFN12LQ6IEE8 588 aa18.65■□□□□ 0.58
SNX17-209ENST00000494893 KIAA0895Q8NCT3 520 aa18.65■□□□□ 0.58
SNX17-209ENST00000494893 HLA-CQ95604 372 aa18.65■□□□□ 0.58
SNX17-209ENST00000494893 B3GALT6Q96L58 329 aa18.65■□□□□ 0.58
SNX17-209ENST00000494893 PLEKHA5Q9HAU0 1116 aa18.65■□□□□ 0.58
SNX17-209ENST00000494893 TUBGCP4Q9UGJ1 667 aa18.65■□□□□ 0.58
SNX17-209ENST00000494893 IRAK3Q9Y616 596 aa18.65■□□□□ 0.58
SNX17-209ENST00000494893 TRIP11Q15643 1979 aa18.64■□□□□ 0.58
SNX17-209ENST00000494893 TBX10O75333 385 aa18.64■□□□□ 0.57
SNX17-209ENST00000494893 MYL1P05976 194 aa18.64■□□□□ 0.57
SNX17-209ENST00000494893 SMC1AQ14683 1233 aaKnown RBP18.64■□□□□ 0.57
SNX17-209ENST00000494893 KYAT1Q16773 422 aa18.64■□□□□ 0.57
SNX17-209ENST00000494893 UPP1Q16831 310 aa18.64■□□□□ 0.57
SNX17-209ENST00000494893 BMT2Q1RMZ1 405 aa18.64■□□□□ 0.57
SNX17-209ENST00000494893 FUT10Q6P4F1 479 aa18.64■□□□□ 0.57
SNX17-209ENST00000494893 SYCP3Q8IZU3 236 aa18.64■□□□□ 0.57
SNX17-209ENST00000494893 EFHBQ8N7U6 833 aa18.64■□□□□ 0.57
SNX17-209ENST00000494893 POMGNT1Q8WZA1 660 aa18.64■□□□□ 0.57
SNX17-209ENST00000494893 SAAL1Q96ER3 474 aa18.64■□□□□ 0.57
SNX17-209ENST00000494893 TLE6Q9H808 572 aa18.64■□□□□ 0.57
SNX17-209ENST00000494893 TMEM206Q9H813 350 aa18.64■□□□□ 0.57
SNX17-209ENST00000494893 CHST7Q9NS84 486 aa18.64■□□□□ 0.57
SNX17-209ENST00000494893 CLDND1Q9NY35 253 aa18.64■□□□□ 0.57
SNX17-209ENST00000494893 COG5Q9UP83 839 aa18.64■□□□□ 0.57
SNX17-209ENST00000494893 TMEM189-UBE2V1I3L0A0 370 aa18.63■□□□□ 0.57
SNX17-209ENST00000494893 NR1I2O75469 434 aa18.63■□□□□ 0.57
SNX17-209ENST00000494893 RPN1P04843 607 aaKnown RBP18.63■□□□□ 0.57
SNX17-209ENST00000494893 GARTP22102 1010 aa18.63■□□□□ 0.57
SNX17-209ENST00000494893 GUCY2FP51841 1108 aa18.63■□□□□ 0.57
SNX17-209ENST00000494893 FAM160A1Q05DH4 1040 aa18.63■□□□□ 0.57
SNX17-209ENST00000494893 POSTNQ15063 836 aa18.63■□□□□ 0.57
SNX17-209ENST00000494893 KIAA0319Q5VV43 1072 aa18.63■□□□□ 0.57
SNX17-209ENST00000494893 NELFCDQ8IXH7 590 aa18.63■□□□□ 0.57
SNX17-209ENST00000494893 PCIF1Q9H4Z3 704 aa18.63■□□□□ 0.57
SNX17-209ENST00000494893 RPF1Q9H9Y2 349 aaKnown RBP18.63■□□□□ 0.57
SNX17-209ENST00000494893 CLEC1BQ9P126 229 aa18.63■□□□□ 0.57
SNX17-209ENST00000494893 BRWD1Q9NSI6 2320 aa18.63■□□□□ 0.57
SNX17-209ENST00000494893 PDCD11Q14690 1871 aaKnown RBP18.63■□□□□ 0.57
SNX17-209ENST00000494893 A0A0C4DFX4 3053 aa18.62■□□□□ 0.57
SNX17-209ENST00000494893 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.62■□□□□ 0.57
SNX17-209ENST00000494893 GOLGA8IPA6NC78 632 aa18.62■□□□□ 0.57
SNX17-209ENST00000494893 GOLGA8JA6NMD2 632 aa18.62■□□□□ 0.57
SNX17-209ENST00000494893 H3BQ06 376 aaPredicted RBP18.62■□□□□ 0.57
SNX17-209ENST00000494893 CLASP2O75122 1294 aaKnown RBP18.62■□□□□ 0.57
SNX17-209ENST00000494893 TADA2AO75478 443 aa18.62■□□□□ 0.57
SNX17-209ENST00000494893 KCNA5P22460 613 aa18.62■□□□□ 0.57
SNX17-209ENST00000494893 KCNQ1P51787 676 aa18.62■□□□□ 0.57
SNX17-209ENST00000494893 DSG1Q02413 1049 aa18.62■□□□□ 0.57
SNX17-209ENST00000494893 PPP2R3AQ06190 1150 aa18.62■□□□□ 0.57
SNX17-209ENST00000494893 JADE1Q6IE81 842 aa18.62■□□□□ 0.57
SNX17-209ENST00000494893 DCLRE1AQ6PJP8 1040 aa18.62■□□□□ 0.57
SNX17-209ENST00000494893 STXBP4Q6ZWJ1 553 aa18.62■□□□□ 0.57
SNX17-209ENST00000494893 ATXN2LQ8WWM7 1075 aaKnown RBP18.62■□□□□ 0.57
SNX17-209ENST00000494893 KIF12Q96FN5 646 aa18.62■□□□□ 0.57
SNX17-209ENST00000494893 UROC1Q96N76 676 aa18.62■□□□□ 0.57
SNX17-209ENST00000494893 FAM213AQ9BRX8 229 aa18.62■□□□□ 0.57
SNX17-209ENST00000494893 EXOC1Q9NV70 894 aa18.62■□□□□ 0.57
SNX17-209ENST00000494893 SLC38A7Q9NVC3 462 aa18.62■□□□□ 0.57
SNX17-209ENST00000494893 UBE4BO95155 1302 aa18.62■□□□□ 0.57
SNX17-209ENST00000494893 CITO14578 2027 aa18.62■□□□□ 0.57
SNX17-209ENST00000494893 PODXLO00592 558 aa18.61■□□□□ 0.57
SNX17-209ENST00000494893 RHOBTB3O94955 611 aa18.61■□□□□ 0.57
SNX17-209ENST00000494893 NFICP08651 508 aa18.61■□□□□ 0.57
SNX17-209ENST00000494893 BRCC3P46736 316 aa18.61■□□□□ 0.57
SNX17-209ENST00000494893 PNOCQ13519 176 aa18.61■□□□□ 0.57
SNX17-209ENST00000494893 RTP2Q5QGT7 225 aa18.61■□□□□ 0.57
SNX17-209ENST00000494893 EFCAB13Q8IY85 973 aa18.61■□□□□ 0.57
SNX17-209ENST00000494893 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.61■□□□□ 0.57
SNX17-209ENST00000494893 PPP2R3CQ969Q6 453 aa18.61■□□□□ 0.57
SNX17-209ENST00000494893 MSLNLQ96KJ4 702 aa18.61■□□□□ 0.57
SNX17-209ENST00000494893 AGPAT3Q9NRZ7 376 aa18.61■□□□□ 0.57
SNX17-209ENST00000494893 SF3B1O75533 1304 aaKnown RBP eCLIP18.6■□□□□ 0.57
SNX17-209ENST00000494893 I3L4J1 428 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms