RNA–Protein interactions for RNA: ENST00000494862.1

HDLBP-245, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 356 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-245ENST00000494862 B4GALT4O60513 344 aa12.38□□□□□ -0.43
HDLBP-245ENST00000494862 TSPAN1O60635 241 aa12.38□□□□□ -0.43
HDLBP-245ENST00000494862 PHACTR2O75167 634 aa12.38□□□□□ -0.43
HDLBP-245ENST00000494862 GPR32O75388 356 aa12.38□□□□□ -0.43
HDLBP-245ENST00000494862 TACC1O75410 805 aa12.38□□□□□ -0.43
HDLBP-245ENST00000494862 CLTAP09496 248 aa12.38□□□□□ -0.43
HDLBP-245ENST00000494862 ARF4P18085 180 aaPredicted RBP12.38□□□□□ -0.43
HDLBP-245ENST00000494862 HOXC8P31273 242 aa12.38□□□□□ -0.43
HDLBP-245ENST00000494862 CHMP4BP1P59074 171 aa12.38□□□□□ -0.43
HDLBP-245ENST00000494862 PCBP1Q15365 356 aaKnown RBP eCLIP12.38□□□□□ -0.434e-7■■■■□ 21.3
HDLBP-245ENST00000494862 DUOXA2Q1HG44 320 aa12.38□□□□□ -0.43
HDLBP-245ENST00000494862 SMYD5Q6GMV2 418 aa12.38□□□□□ -0.43
HDLBP-245ENST00000494862 APBB1IPQ7Z5R6 666 aaPredicted RBP12.38□□□□□ -0.43
HDLBP-245ENST00000494862 THNSL1Q8IYQ7 743 aa12.38□□□□□ -0.43
HDLBP-245ENST00000494862 OR5B17Q8NGF7 314 aa12.38□□□□□ -0.43
HDLBP-245ENST00000494862 OLIG1Q8TAK6 271 aa12.38□□□□□ -0.43
HDLBP-245ENST00000494862 LNX1Q8TBB1 728 aaPredicted RBP12.38□□□□□ -0.43
HDLBP-245ENST00000494862 U2AF1L4Q8WU68 220 aaKnown RBP12.38□□□□□ -0.43
HDLBP-245ENST00000494862 PPP1R16BQ96T49 567 aa12.38□□□□□ -0.43
HDLBP-245ENST00000494862 AGPAT1Q99943 283 aa12.38□□□□□ -0.43
HDLBP-245ENST00000494862 TMEM106CQ9BVX2 250 aa12.38□□□□□ -0.43
HDLBP-245ENST00000494862 FAM49AQ9H0Q0 323 aaPredicted RBP12.38□□□□□ -0.43
HDLBP-245ENST00000494862 C1orf112Q9NSG2 853 aa12.38□□□□□ -0.43
HDLBP-245ENST00000494862 DUSP10Q9Y6W6 482 aa12.38□□□□□ -0.43
HDLBP-245ENST00000494862 MGAMO43451 1857 aa12.38□□□□□ -0.43
HDLBP-245ENST00000494862 MACROD2A1Z1Q3 448 aa12.37□□□□□ -0.43
HDLBP-245ENST00000494862 MYADML2A6NDP7 307 aa12.37□□□□□ -0.43
HDLBP-245ENST00000494862 STK25O00506 426 aa12.37□□□□□ -0.43
HDLBP-245ENST00000494862 DYNC1I1O14576 645 aa12.37□□□□□ -0.43
HDLBP-245ENST00000494862 CTIFO43310 598 aaKnown RBP12.37□□□□□ -0.43
HDLBP-245ENST00000494862 CSDE1O75534 798 aaKnown RBP12.37□□□□□ -0.43
HDLBP-245ENST00000494862 ERLIN2O94905 339 aa12.37□□□□□ -0.43
HDLBP-245ENST00000494862 H2AFZP0C0S5 128 aa12.37□□□□□ -0.43
HDLBP-245ENST00000494862 C6orf222P0C671 652 aaPredicted RBP12.37□□□□□ -0.43
HDLBP-245ENST00000494862 STAG3L1P0CL83 205 aa12.37□□□□□ -0.43
HDLBP-245ENST00000494862 RARBP10826 455 aa12.37□□□□□ -0.43
HDLBP-245ENST00000494862 HOXD10P28358 340 aa12.37□□□□□ -0.43
HDLBP-245ENST00000494862 TIE1P35590 1138 aa12.37□□□□□ -0.43
HDLBP-245ENST00000494862 MAP2K2P36507 400 aa12.37□□□□□ -0.43
HDLBP-245ENST00000494862 USP8P40818 1118 aa12.37□□□□□ -0.43
HDLBP-245ENST00000494862 CACNB2Q08289 660 aaPredicted RBP12.37□□□□□ -0.43
HDLBP-245ENST00000494862 NCBP1Q09161 790 aaKnown RBP12.37□□□□□ -0.43
HDLBP-245ENST00000494862 NCOA4Q13772 614 aa12.37□□□□□ -0.43
HDLBP-245ENST00000494862 HIC1Q14526 733 aa12.37□□□□□ -0.43
HDLBP-245ENST00000494862 DCAF4L1Q3SXM0 396 aa12.37□□□□□ -0.43
HDLBP-245ENST00000494862 GNASQ5JWF2 1037 aa12.37□□□□□ -0.43
HDLBP-245ENST00000494862 RUFY4Q6ZNE9 571 aa12.37□□□□□ -0.43
HDLBP-245ENST00000494862 H2AFVQ71UI9 128 aa12.37□□□□□ -0.43
HDLBP-245ENST00000494862 CDR2LQ86X02 465 aaPredicted RBP12.37□□□□□ -0.43
HDLBP-245ENST00000494862 NME8Q8N427 588 aa12.37□□□□□ -0.43
HDLBP-245ENST00000494862 TRIM58Q8NG06 486 aa12.37□□□□□ -0.43
HDLBP-245ENST00000494862 DHX38Q92620 1227 aaKnown RBP12.37□□□□□ -0.43
HDLBP-245ENST00000494862 ERO1AQ96HE7 468 aa12.37□□□□□ -0.43
HDLBP-245ENST00000494862 CPB2Q96IY4 423 aa12.37□□□□□ -0.43
HDLBP-245ENST00000494862 FAM84AQ96KN4 292 aa12.37□□□□□ -0.43
HDLBP-245ENST00000494862 NOX5Q96PH1 765 aa12.37□□□□□ -0.43
HDLBP-245ENST00000494862 PI4K2AQ9BTU6 479 aa12.37□□□□□ -0.43
HDLBP-245ENST00000494862 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.37□□□□□ -0.43
HDLBP-245ENST00000494862 RNF186Q9NXI6 227 aa12.37□□□□□ -0.43
HDLBP-245ENST00000494862 HDAC6Q9UBN7 1215 aa12.37□□□□□ -0.43
HDLBP-245ENST00000494862 CDC23Q9UJX2 597 aa12.37□□□□□ -0.43
HDLBP-245ENST00000494862 MRFAP1Q9Y605 127 aa12.37□□□□□ -0.43
HDLBP-245ENST00000494862 ZSWIM8A7E2V4 1837 aa12.37□□□□□ -0.43
HDLBP-245ENST00000494862 A0A1B0GUA9 196 aa12.36□□□□□ -0.43
HDLBP-245ENST00000494862 ANO9A1A5B4 782 aa12.36□□□□□ -0.43
HDLBP-245ENST00000494862 TREHO43280 583 aa12.36□□□□□ -0.43
HDLBP-245ENST00000494862 MOCS3O95396 460 aa12.36□□□□□ -0.43
HDLBP-245ENST00000494862 TNNC2P02585 160 aa12.36□□□□□ -0.43
HDLBP-245ENST00000494862 DARSP14868 501 aaKnown RBP12.36□□□□□ -0.43
HDLBP-245ENST00000494862 TBXAS1P24557 533 aaPredicted RBP12.36□□□□□ -0.43
HDLBP-245ENST00000494862 CAP1Q01518 475 aa12.36□□□□□ -0.43
HDLBP-245ENST00000494862 TRIM32Q13049 653 aa12.36□□□□□ -0.43
HDLBP-245ENST00000494862 CUL2Q13617 745 aa12.36□□□□□ -0.43
HDLBP-245ENST00000494862 KIZQ2M2Z5 673 aa12.36□□□□□ -0.43
HDLBP-245ENST00000494862 TRAPPC11Q7Z392 1133 aa12.36□□□□□ -0.43
HDLBP-245ENST00000494862 TNS4Q8IZW8 715 aa12.36□□□□□ -0.43
HDLBP-245ENST00000494862 C7orf31Q8N865 590 aa12.36□□□□□ -0.43
HDLBP-245ENST00000494862 CEP120Q8N960 986 aa12.36□□□□□ -0.43
HDLBP-245ENST00000494862 DNAJB3Q8WWF6 145 aa12.36□□□□□ -0.43
HDLBP-245ENST00000494862 ANKRD36BP1Q96IX9 119 aa12.36□□□□□ -0.43
HDLBP-245ENST00000494862 ALS2CR12Q96Q35 445 aa12.36□□□□□ -0.43
HDLBP-245ENST00000494862 ADPGKQ9BRR6 497 aa12.36□□□□□ -0.43
HDLBP-245ENST00000494862 PACSIN1Q9BY11 444 aa12.36□□□□□ -0.43
HDLBP-245ENST00000494862 APOBEC3GQ9HC16 384 aaKnown RBP12.36□□□□□ -0.43
HDLBP-245ENST00000494862 SRRDQ9UH36 339 aa12.36□□□□□ -0.43
HDLBP-245ENST00000494862 EVPLQ92817 2033 aa12.35□□□□□ -0.43
HDLBP-245ENST00000494862 A0A0A6YYK5 440 aaPredicted RBP12.35□□□□□ -0.43
HDLBP-245ENST00000494862 LACTBL1A8MY62 500 aa12.35□□□□□ -0.43
HDLBP-245ENST00000494862 CYP26A1O43174 497 aa12.35□□□□□ -0.43
HDLBP-245ENST00000494862 SGPL1O95470 568 aa12.35□□□□□ -0.43
HDLBP-245ENST00000494862 ASS1P00966 412 aaKnown RBP12.35□□□□□ -0.43
HDLBP-245ENST00000494862 TMEM191BP0C7N4 346 aa12.35□□□□□ -0.43
HDLBP-245ENST00000494862 CHRNB2P17787 502 aa12.35□□□□□ -0.43
HDLBP-245ENST00000494862 AXLP30530 894 aa12.35□□□□□ -0.43
HDLBP-245ENST00000494862 GRM5P41594 1212 aa12.35□□□□□ -0.43
HDLBP-245ENST00000494862 BPIFB4P59827 614 aa12.35□□□□□ -0.43
HDLBP-245ENST00000494862 NOP14P78316 857 aaKnown RBP12.35□□□□□ -0.43
HDLBP-245ENST00000494862 ZNF200P98182 395 aaPredicted RBP12.35□□□□□ -0.43
HDLBP-245ENST00000494862 TFAMQ00059 246 aaKnown RBP12.35□□□□□ -0.43
HDLBP-245ENST00000494862 TMEM62Q0P6H9 643 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms