RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 TCHHQ07283 1943 aa17.35■□□□□ 0.37
LIME1-209ENST00000494776 FAM237AA0A1B0GTK4 181 aa17.35■□□□□ 0.37
LIME1-209ENST00000494776 B3GAT3O94766 335 aa17.35■□□□□ 0.37
LIME1-209ENST00000494776 KIF4AO95239 1232 aa17.35■□□□□ 0.37
LIME1-209ENST00000494776 GLUD2P49448 558 aa17.35■□□□□ 0.37
LIME1-209ENST00000494776 ACOT2P49753 483 aa17.35■□□□□ 0.37
LIME1-209ENST00000494776 CLCNKBP51801 687 aa17.35■□□□□ 0.37
LIME1-209ENST00000494776 SPAG1Q07617 926 aa17.35■□□□□ 0.37
LIME1-209ENST00000494776 COL19A1Q14993 1142 aa17.35■□□□□ 0.37
LIME1-209ENST00000494776 PTPN14Q15678 1187 aa17.35■□□□□ 0.37
LIME1-209ENST00000494776 USP41Q3LFD5 358 aa17.35■□□□□ 0.37
LIME1-209ENST00000494776 LEXMQ3ZCV2 418 aa17.35■□□□□ 0.37
LIME1-209ENST00000494776 ZBTB41Q5SVQ8 909 aa17.35■□□□□ 0.37
LIME1-209ENST00000494776 DCLRE1AQ6PJP8 1040 aa17.35■□□□□ 0.37
LIME1-209ENST00000494776 TAS1R1Q7RTX1 841 aa17.35■□□□□ 0.37
LIME1-209ENST00000494776 NOC3LQ8WTT2 800 aaKnown RBP17.35■□□□□ 0.37
LIME1-209ENST00000494776 CCDC47Q96A33 483 aaKnown RBP17.35■□□□□ 0.37
LIME1-209ENST00000494776 KIF12Q96FN5 646 aa17.35■□□□□ 0.37
LIME1-209ENST00000494776 DDX27Q96GQ7 796 aaKnown RBP17.35■□□□□ 0.37
LIME1-209ENST00000494776 GPR62Q9BZJ7 368 aa17.35■□□□□ 0.37
LIME1-209ENST00000494776 GOLPH3LQ9H4A5 285 aa17.35■□□□□ 0.37
LIME1-209ENST00000494776 EXOC1Q9NV70 894 aa17.35■□□□□ 0.37
LIME1-209ENST00000494776 CHMP5Q9NZZ3 219 aa17.35■□□□□ 0.37
LIME1-209ENST00000494776 IRAK3Q9Y616 596 aa17.35■□□□□ 0.37
LIME1-209ENST00000494776 STYXL1Q9Y6J8 313 aa17.35■□□□□ 0.37
LIME1-209ENST00000494776 ATG2AQ2TAZ0 1938 aa17.35■□□□□ 0.37
LIME1-209ENST00000494776 TTC26A0AVF1 554 aa17.34■□□□□ 0.37
LIME1-209ENST00000494776 LACTBL1A8MY62 500 aa17.34■□□□□ 0.37
LIME1-209ENST00000494776 EIF3DO15371 548 aaKnown RBP eCLIP17.34■□□□□ 0.37
LIME1-209ENST00000494776 XPOTO43592 962 aaKnown RBP17.34■□□□□ 0.37
LIME1-209ENST00000494776 ZNF202O95125 648 aa17.34■□□□□ 0.37
LIME1-209ENST00000494776 MYL1P05976 194 aa17.34■□□□□ 0.37
LIME1-209ENST00000494776 KLRC2P26717 231 aa17.34■□□□□ 0.37
LIME1-209ENST00000494776 DLX2Q07687 328 aaPredicted RBP17.34■□□□□ 0.37
LIME1-209ENST00000494776 ELAVL2Q12926 359 aaKnown RBP17.34■□□□□ 0.37
LIME1-209ENST00000494776 MYO7AQ13402 2215 aa17.34■□□□□ 0.37
LIME1-209ENST00000494776 CLUL1Q15846 466 aa17.34■□□□□ 0.37
LIME1-209ENST00000494776 ENOX2Q16206 610 aaKnown RBP17.34■□□□□ 0.37
LIME1-209ENST00000494776 KRBA2Q6ZNG9 492 aa17.34■□□□□ 0.37
LIME1-209ENST00000494776 CEP57Q86XR8 500 aa17.34■□□□□ 0.37
LIME1-209ENST00000494776 CD302Q8IX05 232 aa17.34■□□□□ 0.37
LIME1-209ENST00000494776 GLIS3Q8NEA6 775 aa17.34■□□□□ 0.37
LIME1-209ENST00000494776 C18orf25Q96B23 403 aaPredicted RBP17.34■□□□□ 0.37
LIME1-209ENST00000494776 SLC39A2Q9NP94 309 aa17.34■□□□□ 0.37
LIME1-209ENST00000494776 CPSF3Q9UKF6 684 aaKnown RBP17.34■□□□□ 0.37
LIME1-209ENST00000494776 REV3LO60673 3130 aa17.34■□□□□ 0.37
LIME1-209ENST00000494776 PODXLO00592 558 aa17.33■□□□□ 0.36
LIME1-209ENST00000494776 MEFVO15553 781 aaPredicted RBP17.33■□□□□ 0.36
LIME1-209ENST00000494776 TRAPPC3O43617 180 aa17.33■□□□□ 0.36
LIME1-209ENST00000494776 FAM189A1O60320 539 aa17.33■□□□□ 0.36
LIME1-209ENST00000494776 CLASP2O75122 1294 aaKnown RBP17.33■□□□□ 0.36
LIME1-209ENST00000494776 TBX10O75333 385 aa17.33■□□□□ 0.36
LIME1-209ENST00000494776 LDHAP00338 332 aaKnown RBP17.33■□□□□ 0.36
LIME1-209ENST00000494776 ADSSP30520 456 aa17.33■□□□□ 0.36
LIME1-209ENST00000494776 RPL9P32969 192 aaKnown RBP17.33■□□□□ 0.36
LIME1-209ENST00000494776 LTBRP36941 435 aa17.33■□□□□ 0.36
LIME1-209ENST00000494776 RBM10P98175 930 aaKnown RBP17.33■□□□□ 0.36
LIME1-209ENST00000494776 DSG1Q02413 1049 aa17.33■□□□□ 0.36
LIME1-209ENST00000494776 SOX4Q06945 474 aaPredicted RBP17.33■□□□□ 0.36
LIME1-209ENST00000494776 UPP1Q16831 310 aa17.33■□□□□ 0.36
LIME1-209ENST00000494776 PUS10Q3MIT2 529 aaKnown RBP17.33■□□□□ 0.36
LIME1-209ENST00000494776 FAM171A1Q5VUB5 890 aa17.33■□□□□ 0.36
LIME1-209ENST00000494776 ARMCX5Q6P1M9 558 aa17.33■□□□□ 0.36
LIME1-209ENST00000494776 PPFIBP1Q86W92 1011 aa17.33■□□□□ 0.36
LIME1-209ENST00000494776 RIN2Q8WYP3 895 aaPredicted RBP17.33■□□□□ 0.36
LIME1-209ENST00000494776 CASP10Q92851 521 aa17.33■□□□□ 0.36
LIME1-209ENST00000494776 B3GALT6Q96L58 329 aa17.33■□□□□ 0.36
LIME1-209ENST00000494776 TSPAN18Q96SJ8 248 aa17.33■□□□□ 0.36
LIME1-209ENST00000494776 CD207Q9UJ71 328 aa17.33■□□□□ 0.36
LIME1-209ENST00000494776 BARX2Q9UMQ3 279 aaPredicted RBP17.33■□□□□ 0.36
LIME1-209ENST00000494776 UBQLN1Q9UMX0 589 aaKnown RBP17.33■□□□□ 0.36
LIME1-209ENST00000494776 FAM50BQ9Y247 325 aa17.33■□□□□ 0.36
LIME1-209ENST00000494776 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.33■□□□□ 0.36
LIME1-209ENST00000494776 TTC28Q96AY4 2481 aa17.32■□□□□ 0.36
LIME1-209ENST00000494776 SPDYE4A6NLX3 237 aa17.32■□□□□ 0.36
LIME1-209ENST00000494776 CNPP09543 421 aaKnown RBP17.32■□□□□ 0.36
LIME1-209ENST00000494776 GARTP22102 1010 aa17.32■□□□□ 0.36
LIME1-209ENST00000494776 KMT5BQ4FZB7 885 aa17.32■□□□□ 0.36
LIME1-209ENST00000494776 KIAA0319Q5VV43 1072 aa17.32■□□□□ 0.36
LIME1-209ENST00000494776 PTCRAQ6ISU1 281 aaPredicted RBP17.32■□□□□ 0.36
LIME1-209ENST00000494776 KANK3Q6NY19 840 aa17.32■□□□□ 0.36
LIME1-209ENST00000494776 NELFCDQ8IXH7 590 aa17.32■□□□□ 0.36
LIME1-209ENST00000494776 RNF168Q8IYW5 571 aaPredicted RBP17.32■□□□□ 0.36
LIME1-209ENST00000494776 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.32■□□□□ 0.36
LIME1-209ENST00000494776 ZNF507Q8TCN5 953 aa17.32■□□□□ 0.36
LIME1-209ENST00000494776 SAAL1Q96ER3 474 aa17.32■□□□□ 0.36
LIME1-209ENST00000494776 KLHL5Q96PQ7 755 aa17.32■□□□□ 0.36
LIME1-209ENST00000494776 FAM213AQ9BRX8 229 aa17.32■□□□□ 0.36
LIME1-209ENST00000494776 TTPALQ9BTX7 342 aa17.32■□□□□ 0.36
LIME1-209ENST00000494776 PCIF1Q9H4Z3 704 aa17.32■□□□□ 0.36
LIME1-209ENST00000494776 CHST7Q9NS84 486 aa17.32■□□□□ 0.36
LIME1-209ENST00000494776 TUBGCP4Q9UGJ1 667 aa17.32■□□□□ 0.36
LIME1-209ENST00000494776 NUB1Q9Y5A7 615 aa17.32■□□□□ 0.36
LIME1-209ENST00000494776 HCFC2Q9Y5Z7 792 aa17.32■□□□□ 0.36
LIME1-209ENST00000494776 UBE4BO95155 1302 aa17.31■□□□□ 0.36
LIME1-209ENST00000494776 TMEM189-UBE2V1I3L0A0 370 aa17.31■□□□□ 0.36
LIME1-209ENST00000494776 GLP2RO95838 553 aa17.31■□□□□ 0.36
LIME1-209ENST00000494776 EFEMP2O95967 443 aa17.31■□□□□ 0.36
LIME1-209ENST00000494776 RPN1P04843 607 aaKnown RBP17.31■□□□□ 0.36
LIME1-209ENST00000494776 ADH1AP07327 375 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms