RNA–Protein interactions for RNA: ENST00000494742.5

PCCB-219, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 4

Gene PCCB, Length 547 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-219ENST00000494742 LARGE1O95461 756 aa16.09■□□□□ 0.17
PCCB-219ENST00000494742 OR52Z1P0C646 297 aa16.09■□□□□ 0.17
PCCB-219ENST00000494742 ATF7IP2Q5U623 682 aa16.09■□□□□ 0.17
PCCB-219ENST00000494742 EEF1DP3Q658K8 133 aa16.09■□□□□ 0.17
PCCB-219ENST00000494742 KIAA2013Q8IYS2 634 aa16.09■□□□□ 0.17
PCCB-219ENST00000494742 SUMF1Q8NBK3 374 aa16.09■□□□□ 0.17
PCCB-219ENST00000494742 RMDN1Q96DB5 314 aa16.09■□□□□ 0.17
PCCB-219ENST00000494742 DDX27Q96GQ7 796 aaKnown RBP16.09■□□□□ 0.17
PCCB-219ENST00000494742 CXCL16Q9H2A7 254 aa16.09■□□□□ 0.17
PCCB-219ENST00000494742 TOPORSQ9NS56 1045 aaPredicted RBP16.09■□□□□ 0.17
PCCB-219ENST00000494742 TNFSF13BQ9Y275 285 aa16.09■□□□□ 0.17
PCCB-219ENST00000494742 GDAQ9Y2T3 454 aa16.09■□□□□ 0.17
PCCB-219ENST00000494742 CDY1Q9Y6F8 540 aa16.09■□□□□ 0.17
PCCB-219ENST00000494742 CACNA1IQ9P0X4 2223 aa16.09■□□□□ 0.17
PCCB-219ENST00000494742 TRIP11Q15643 1979 aa16.08■□□□□ 0.16
PCCB-219ENST00000494742 FAM170BA6NMN3 283 aa16.08■□□□□ 0.16
PCCB-219ENST00000494742 NCAM2O15394 837 aa16.08■□□□□ 0.16
PCCB-219ENST00000494742 JAK2O60674 1132 aa16.08■□□□□ 0.16
PCCB-219ENST00000494742 EIF5BO60841 1220 aaKnown RBP16.08■□□□□ 0.16
PCCB-219ENST00000494742 EDN1P05305 212 aa16.08■□□□□ 0.16
PCCB-219ENST00000494742 CLCNKBP51801 687 aa16.08■□□□□ 0.16
PCCB-219ENST00000494742 PUM1Q14671 1186 aaKnown RBP eCLIP16.08■□□□□ 0.16
PCCB-219ENST00000494742 ZBTB41Q5SVQ8 909 aa16.08■□□□□ 0.16
PCCB-219ENST00000494742 SLC8B1Q6J4K2 584 aa16.08■□□□□ 0.16
PCCB-219ENST00000494742 ST13P5Q8NFI4 369 aaPredicted RBP16.08■□□□□ 0.16
PCCB-219ENST00000494742 ZNF461Q8TAF7 563 aa16.08■□□□□ 0.16
PCCB-219ENST00000494742 HINFPQ9BQA5 517 aa16.08■□□□□ 0.16
PCCB-219ENST00000494742 KXD1Q9BQD3 176 aa16.08■□□□□ 0.16
PCCB-219ENST00000494742 LTB4R2Q9NPC1 389 aa16.08■□□□□ 0.16
PCCB-219ENST00000494742 SLC38A7Q9NVC3 462 aa16.08■□□□□ 0.16
PCCB-219ENST00000494742 SPATA6Q9NWH7 488 aaPredicted RBP16.08■□□□□ 0.16
PCCB-219ENST00000494742 HCFC1R1Q9NWW0 138 aa16.08■□□□□ 0.16
PCCB-219ENST00000494742 MRPS23Q9Y3D9 190 aaKnown RBP16.08■□□□□ 0.16
PCCB-219ENST00000494742 PCDHGA2Q9Y5H1 932 aa16.08■□□□□ 0.16
PCCB-219ENST00000494742 STK24Q9Y6E0 443 aa16.08■□□□□ 0.16
PCCB-219ENST00000494742 PHLPP2Q6ZVD8 1323 aa16.08■□□□□ 0.16
PCCB-219ENST00000494742 OTOGLQ3ZCN5 2332 aa16.08■□□□□ 0.16
PCCB-219ENST00000494742 DMXL1Q9Y485 3027 aa16.07■□□□□ 0.16
PCCB-219ENST00000494742 SMIM28A0A1B0GU29 152 aa16.07■□□□□ 0.16
PCCB-219ENST00000494742 ARHGEF37A1IGU5 675 aa16.07■□□□□ 0.16
PCCB-219ENST00000494742 K7ERI5 159 aa16.07■□□□□ 0.16
PCCB-219ENST00000494742 LRRN2O75325 713 aa16.07■□□□□ 0.16
PCCB-219ENST00000494742 MICAL2O94851 1124 aa16.07■□□□□ 0.16
PCCB-219ENST00000494742 ABLIM3O94929 683 aa16.07■□□□□ 0.16
PCCB-219ENST00000494742 PTPN2P17706 415 aa16.07■□□□□ 0.16
PCCB-219ENST00000494742 LIG1P18858 919 aa16.07■□□□□ 0.16
PCCB-219ENST00000494742 GRM5P41594 1212 aa16.07■□□□□ 0.16
PCCB-219ENST00000494742 RPS9P46781 194 aaKnown RBP16.07■□□□□ 0.16
PCCB-219ENST00000494742 YARSP54577 528 aaKnown RBP16.07■□□□□ 0.16
PCCB-219ENST00000494742 UBXN2BQ14CS0 331 aa16.07■□□□□ 0.16
PCCB-219ENST00000494742 XKR4Q5GH76 650 aa16.07■□□□□ 0.16
PCCB-219ENST00000494742 NT5DC1Q5TFE4 455 aa16.07■□□□□ 0.16
PCCB-219ENST00000494742 CD300LGQ6UXG3 332 aa16.07■□□□□ 0.16
PCCB-219ENST00000494742 ALKAL1Q6UXT8 129 aa16.07■□□□□ 0.16
PCCB-219ENST00000494742 DGLUCYQ7Z3D6 616 aa16.07■□□□□ 0.16
PCCB-219ENST00000494742 GPR161Q8N6U8 529 aaKnown RBP16.07■□□□□ 0.16
PCCB-219ENST00000494742 CLDN23Q96B33 292 aa16.07■□□□□ 0.16
PCCB-219ENST00000494742 CCDC94Q9BW85 323 aaPredicted RBP16.07■□□□□ 0.16
PCCB-219ENST00000494742 FOXP1Q9H334 677 aaPredicted RBP16.07■□□□□ 0.16
PCCB-219ENST00000494742 USP20Q9Y2K6 914 aa16.07■□□□□ 0.16
PCCB-219ENST00000494742 MRPS17Q9Y2R5 130 aaKnown RBP16.07■□□□□ 0.16
PCCB-219ENST00000494742 RHOP08100 348 aa16.06■□□□□ 0.16
PCCB-219ENST00000494742 TKTP29401 623 aaKnown RBP16.06■□□□□ 0.16
PCCB-219ENST00000494742 TRAPPC10P48553 1259 aa16.06■□□□□ 0.16
PCCB-219ENST00000494742 FXR2P51116 673 aaKnown RBP eCLIP16.06■□□□□ 0.16
PCCB-219ENST00000494742 NEK4P51957 841 aa16.06■□□□□ 0.16
PCCB-219ENST00000494742 GLRA4Q5JXX5 417 aa16.06■□□□□ 0.16
PCCB-219ENST00000494742 DNASE1L2Q92874 299 aa16.06■□□□□ 0.16
PCCB-219ENST00000494742 ELSPBP1Q96BH3 223 aa16.06■□□□□ 0.16
PCCB-219ENST00000494742 BHMT2Q9H2M3 363 aa16.06■□□□□ 0.16
PCCB-219ENST00000494742 DLL3Q9NYJ7 618 aa16.06■□□□□ 0.16
PCCB-219ENST00000494742 MTF2Q9Y483 593 aaPredicted RBP16.06■□□□□ 0.16
PCCB-219ENST00000494742 FRYLO94915 3013 aa16.05■□□□□ 0.16
PCCB-219ENST00000494742 H7C4K7 107 aa16.05■□□□□ 0.16
PCCB-219ENST00000494742 ZNF197O14709 1029 aa16.05■□□□□ 0.16
PCCB-219ENST00000494742 SYN3O14994 580 aa16.05■□□□□ 0.16
PCCB-219ENST00000494742 LRG1P02750 347 aa16.05■□□□□ 0.16
PCCB-219ENST00000494742 ATF2P15336 505 aa16.05■□□□□ 0.16
PCCB-219ENST00000494742 SDHBP21912 280 aa16.05■□□□□ 0.16
PCCB-219ENST00000494742 ELF1P32519 619 aa16.05■□□□□ 0.16
PCCB-219ENST00000494742 CCT6AP40227 531 aaKnown RBP16.05■□□□□ 0.16
PCCB-219ENST00000494742 FOSBP53539 338 aa16.05■□□□□ 0.16
PCCB-219ENST00000494742 ROR1Q01973 937 aa16.05■□□□□ 0.16
PCCB-219ENST00000494742 PDIA5Q14554 519 aa16.05■□□□□ 0.16
PCCB-219ENST00000494742 ZNF174Q15697 407 aa16.05■□□□□ 0.16
PCCB-219ENST00000494742 ZNF852Q6ZMS4 543 aa16.05■□□□□ 0.16
PCCB-219ENST00000494742 TCEAL8Q8IYN2 117 aa16.05■□□□□ 0.16
PCCB-219ENST00000494742 ZBTB44Q8NCP5 570 aa16.05■□□□□ 0.16
PCCB-219ENST00000494742 C3orf58Q8NDZ4 430 aa16.05■□□□□ 0.16
PCCB-219ENST00000494742 ATRIPQ8WXE1 791 aa16.05■□□□□ 0.16
PCCB-219ENST00000494742 NELL1Q92832 810 aa16.05■□□□□ 0.16
PCCB-219ENST00000494742 KIFC3Q9BVG8 833 aa16.05■□□□□ 0.16
PCCB-219ENST00000494742 FAM126AQ9BYI3 521 aaPredicted RBP16.05■□□□□ 0.16
PCCB-219ENST00000494742 TMEM134Q9H6X4 195 aa16.05■□□□□ 0.16
PCCB-219ENST00000494742 PTPRHQ9HD43 1115 aa16.05■□□□□ 0.16
PCCB-219ENST00000494742 ZSCAN32Q9NX65 697 aa16.05■□□□□ 0.16
PCCB-219ENST00000494742 MAFFQ9ULX9 164 aa16.05■□□□□ 0.16
PCCB-219ENST00000494742 PRRG1O14668 218 aa16.04■□□□□ 0.16
PCCB-219ENST00000494742 TBC1D4O60343 1298 aa16.04■□□□□ 0.16
PCCB-219ENST00000494742 KCNE1P15382 129 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms