RNA–Protein interactions for RNA: ENST00000494654.1

MDC1-208, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-208ENST00000494654 FGFR1OP2Q9NVK5 253 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 EURLQ9NYK6 297 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 CABP1Q9NZU7 370 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 BTBD7Q9P203 1132 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 THEGQ9P2T0 379 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 MAGEC2Q9UBF1 373 aaPredicted RBP2.91□□□□□ -1.94
MDC1-208ENST00000494654 DKK3Q9UBP4 350 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 DBF4Q9UBU7 674 aaPredicted RBP2.91□□□□□ -1.94
MDC1-208ENST00000494654 STK17AQ9UEE5 414 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 PARP2Q9UGN5 583 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 SEC63Q9UGP8 760 aaKnown RBP2.91□□□□□ -1.94
MDC1-208ENST00000494654 CNOT7Q9UIV1 285 aaKnown RBP2.91□□□□□ -1.94
MDC1-208ENST00000494654 RASAL2Q9UJF2 1139 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 ZNF180Q9UJW8 692 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 ANGEL1Q9UNK9 670 aaKnown RBP2.91□□□□□ -1.94
MDC1-208ENST00000494654 PA2G4Q9UQ80 394 aaKnown RBP2.91□□□□□ -1.94
MDC1-208ENST00000494654 CHMP2BQ9UQN3 213 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 NOD1Q9Y239 953 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 SIK3Q9Y2K2 1263 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 STARD13Q9Y3M8 1113 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 FAM32AQ9Y421 112 aaKnown RBP2.91□□□□□ -1.94
MDC1-208ENST00000494654 ACTL7BQ9Y614 415 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 FPGT-TNNI3KV9GXZ4 949 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 RIC1Q4ADV7 1423 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 NCANO14594 1321 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 SYNGAP1Q96PV0 1343 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 MGAMO43451 1857 aa2.9□□□□□ -1.94
MDC1-208ENST00000494654 CITO14578 2027 aa2.9□□□□□ -1.94
MDC1-208ENST00000494654 RTL9Q8NET4 1388 aa2.9□□□□□ -1.94
MDC1-208ENST00000494654 MYLKQ15746 1914 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 CEP350Q5VT06 3117 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 A0A0A6YYK5 440 aaPredicted RBP2.9□□□□□ -1.95
MDC1-208ENST00000494654 TRIM49BA6NDI0 452 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 LRRC53A6NM62 1247 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 USP17L15C9J2P7 530 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 USP17L10C9JJH3 530 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 USP17L13C9JLJ4 530 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 USP17L12C9JPN9 530 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 USP17L11C9JVI0 530 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 USP17L21D6R901 530 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 USP17L18D6R9N7 530 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 USP17L22D6RA61 530 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 USP17L17D6RBQ6 530 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 USP17L19D6RCP7 530 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 USP17L20D6RJB6 530 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 E9PBE3 544 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 F8W8V4 182 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 H0Y3Z8 333 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 GPR25O00155 361 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 C2CD2LO14523 706 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 LSM1O15116 133 aaKnown RBP2.9□□□□□ -1.95
MDC1-208ENST00000494654 ZBTB43O43298 467 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 TIMM44O43615 452 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 NDUFB5O43674 189 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 CYTH3O43739 400 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 AKR1B10O60218 316 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 ZNF862O60290 1169 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 SERPINB7O75635 380 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 PALMO75781 387 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 KRT36O76013 467 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 RHOBTB3O94955 611 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 ZWINTO95229 277 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 DEXIO95424 95 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 PARNO95453 639 aaKnown RBP2.9□□□□□ -1.95
MDC1-208ENST00000494654 TTLL1O95922 423 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 RPN1P04843 607 aaKnown RBP2.9□□□□□ -1.95
MDC1-208ENST00000494654 UBTFL6P0CB48 400 aaPredicted RBP2.9□□□□□ -1.95
MDC1-208ENST00000494654 GSTT2P0CG29 244 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 GSTT2BP0CG30 244 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 ETS2P15036 469 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 HSPA6P17066 643 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 IFNAR1P17181 557 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 GNAT2P19087 354 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 POLR2EP19388 210 aaKnown RBP2.9□□□□□ -1.95
MDC1-208ENST00000494654 MUTP22033 750 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 ITGA6P23229 1130 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 CCNE1P24864 410 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 TARSP26639 723 aaKnown RBP2.9□□□□□ -1.95
MDC1-208ENST00000494654 ANXA13P27216 316 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 MARK3P27448 753 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 CXCR5P32302 372 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 GTF2H1P32780 548 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 TCF7P36402 384 aaPredicted RBP2.9□□□□□ -1.95
MDC1-208ENST00000494654 FLT3P36888 993 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 EIF4A3P38919 411 aaKnown RBP2.9□□□□□ -1.95
MDC1-208ENST00000494654 GRIA2P42262 883 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 LIFRP42702 1097 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 SLC1A4P43007 532 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 AFMP43652 599 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 IFNAR2P48551 515 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 PTENP60484 403 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 RPS3AP61247 264 aaKnown RBP2.9□□□□□ -1.95
MDC1-208ENST00000494654 HTRA3P83110 453 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 ATP2C1P98194 919 aaPredicted RBP2.9□□□□□ -1.95
MDC1-208ENST00000494654 KRT76Q01546 638 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 POU5F1Q01860 360 aaKnown RBP2.9□□□□□ -1.95
MDC1-208ENST00000494654 CYP27A1Q02318 531 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 CREB5Q02930 508 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 KLRC3Q07444 240 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 USP17L24Q0WX57 530 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms