RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 HSPA6P17066 643 aa5.72□□□□□ -1.49
SMC4-224ENST00000494612 VCAM1P19320 739 aa5.72□□□□□ -1.49
SMC4-224ENST00000494612 KIR2DL3P43628 341 aa5.72□□□□□ -1.49
SMC4-224ENST00000494612 MINDY4Q4G0A6 757 aa5.72□□□□□ -1.49
SMC4-224ENST00000494612 ZKSCAN2Q63HK3 967 aa5.72□□□□□ -1.49
SMC4-224ENST00000494612 NXNQ6DKJ4 435 aa5.72□□□□□ -1.49
SMC4-224ENST00000494612 CXorf57Q6NSI4 855 aaKnown RBP5.72□□□□□ -1.49
SMC4-224ENST00000494612 Q6ZVL8 140 aa5.72□□□□□ -1.49
SMC4-224ENST00000494612 TAS1R1Q7RTX1 841 aa5.72□□□□□ -1.49
SMC4-224ENST00000494612 GLCCI1Q86VQ1 547 aa5.72□□□□□ -1.49
SMC4-224ENST00000494612 REPS2Q8NFH8 660 aa5.72□□□□□ -1.49
SMC4-224ENST00000494612 CCHCR1Q8TD31 782 aa5.72□□□□□ -1.49
SMC4-224ENST00000494612 SNX33Q8WV41 574 aa5.72□□□□□ -1.49
SMC4-224ENST00000494612 CCDC136Q96JN2 1154 aa5.72□□□□□ -1.49
SMC4-224ENST00000494612 C8orf48Q96LL4 319 aa5.72□□□□□ -1.49
SMC4-224ENST00000494612 C7orf25Q9BPX7 421 aa5.72□□□□□ -1.49
SMC4-224ENST00000494612 GOLGA6AQ9NYA3 693 aa5.72□□□□□ -1.49
SMC4-224ENST00000494612 DDX20Q9UHI6 824 aaKnown RBP5.72□□□□□ -1.49
SMC4-224ENST00000494612 IPPQ9Y573 584 aa5.72□□□□□ -1.49
SMC4-224ENST00000494612 HS3ST4Q9Y661 456 aa5.72□□□□□ -1.49
SMC4-224ENST00000494612 MASP2O00187 686 aa5.71□□□□□ -1.5
SMC4-224ENST00000494612 MTSS1O43312 755 aa5.71□□□□□ -1.5
SMC4-224ENST00000494612 CTNND1O60716 968 aaKnown RBP5.71□□□□□ -1.5
SMC4-224ENST00000494612 RHOBTB3O94955 611 aa5.71□□□□□ -1.5
SMC4-224ENST00000494612 CASRP41180 1078 aa5.71□□□□□ -1.5
SMC4-224ENST00000494612 GFOD2Q3B7J2 385 aa5.71□□□□□ -1.5
SMC4-224ENST00000494612 USP45Q70EL2 814 aa5.71□□□□□ -1.5
SMC4-224ENST00000494612 UNC5BQ8IZJ1 945 aa5.71□□□□□ -1.5
SMC4-224ENST00000494612 PPP1R35Q8TAP8 253 aa5.71□□□□□ -1.5
SMC4-224ENST00000494612 SLC35G2Q8TBE7 412 aa5.71□□□□□ -1.5
SMC4-224ENST00000494612 HPS3Q969F9 1004 aa5.71□□□□□ -1.5
SMC4-224ENST00000494612 TIFAQ96CG3 184 aa5.71□□□□□ -1.5
SMC4-224ENST00000494612 PGBD4Q96DM1 585 aa5.71□□□□□ -1.5
SMC4-224ENST00000494612 MAP3K14Q99558 947 aa5.71□□□□□ -1.5
SMC4-224ENST00000494612 C14orf93Q9H972 538 aaKnown RBP5.71□□□□□ -1.5
SMC4-224ENST00000494612 NMRK2Q9NPI5 230 aa5.71□□□□□ -1.5
SMC4-224ENST00000494612 COL4A3Q01955 1670 aa5.71□□□□□ -1.5
SMC4-224ENST00000494612 LRRC14BA6NHZ5 514 aa5.7□□□□□ -1.5
SMC4-224ENST00000494612 KRTAP29-1A8MX34 341 aaPredicted RBP5.7□□□□□ -1.5
SMC4-224ENST00000494612 STC2O76061 302 aa5.7□□□□□ -1.5
SMC4-224ENST00000494612 IPO13O94829 963 aaKnown RBP5.7□□□□□ -1.5
SMC4-224ENST00000494612 LMNAP02545 664 aaKnown RBP5.7□□□□□ -1.5
SMC4-224ENST00000494612 AKAP5P24588 427 aa5.7□□□□□ -1.5
SMC4-224ENST00000494612 ZFP36P26651 326 aaKnown RBP5.7□□□□□ -1.5
SMC4-224ENST00000494612 ECHS1P30084 290 aa5.7□□□□□ -1.5
SMC4-224ENST00000494612 PTPN7P35236 360 aa5.7□□□□□ -1.5
SMC4-224ENST00000494612 KRTAP10-11P60412 298 aa5.7□□□□□ -1.5
SMC4-224ENST00000494612 GTF2H3Q13889 308 aa5.7□□□□□ -1.5
SMC4-224ENST00000494612 LLGL1Q15334 1064 aa5.7□□□□□ -1.5
SMC4-224ENST00000494612 CCDC181Q5TID7 509 aa5.7□□□□□ -1.5
SMC4-224ENST00000494612 FAM180AQ6UWF9 173 aa5.7□□□□□ -1.5
SMC4-224ENST00000494612 PQLC1Q8N2U9 271 aa5.7□□□□□ -1.5
SMC4-224ENST00000494612 CAMKK1Q8N5S9 505 aa5.7□□□□□ -1.5
SMC4-224ENST00000494612 OR5M3Q8NGP4 307 aa5.7□□□□□ -1.5
SMC4-224ENST00000494612 MDM1Q8TC05 714 aa5.7□□□□□ -1.5
SMC4-224ENST00000494612 ST8SIA2Q92186 375 aa5.7□□□□□ -1.5
SMC4-224ENST00000494612 HDAC10Q969S8 669 aa5.7□□□□□ -1.5
SMC4-224ENST00000494612 ZNF764Q96H86 408 aaPredicted RBP5.7□□□□□ -1.5
SMC4-224ENST00000494612 NUP88Q99567 741 aaPredicted RBP5.7□□□□□ -1.5
SMC4-224ENST00000494612 ACO2Q99798 780 aaKnown RBP5.7□□□□□ -1.5
SMC4-224ENST00000494612 ENKD1Q9H0I2 346 aa5.7□□□□□ -1.5
SMC4-224ENST00000494612 ADARB2Q9NS39 739 aaKnown RBP5.7□□□□□ -1.5
SMC4-224ENST00000494612 OBP2AQ9NY56 170 aa5.7□□□□□ -1.5
SMC4-224ENST00000494612 PACSIN3Q9UKS6 424 aa5.7□□□□□ -1.5
SMC4-224ENST00000494612 GRID2IPA4D2P6 1211 aa5.69□□□□□ -1.5
SMC4-224ENST00000494612 PRC1O43663 620 aa5.69□□□□□ -1.5
SMC4-224ENST00000494612 ITGB1P05556 798 aa5.69□□□□□ -1.5
SMC4-224ENST00000494612 NPEPPSP55786 919 aa5.69□□□□□ -1.5
SMC4-224ENST00000494612 DUSP2Q05923 314 aa5.69□□□□□ -1.5
SMC4-224ENST00000494612 GRM3Q14832 879 aa5.69□□□□□ -1.5
SMC4-224ENST00000494612 PGS1Q32NB8 556 aa5.69□□□□□ -1.5
SMC4-224ENST00000494612 CCDC157Q569K6 752 aa5.69□□□□□ -1.5
SMC4-224ENST00000494612 DCAF17Q5H9S7 520 aaPredicted RBP5.69□□□□□ -1.5
SMC4-224ENST00000494612 B3GNT9Q6UX72 402 aa5.69□□□□□ -1.5
SMC4-224ENST00000494612 KSR2Q6VAB6 950 aa5.69□□□□□ -1.5
SMC4-224ENST00000494612 MIGA2Q7L4E1 593 aa5.69□□□□□ -1.5
SMC4-224ENST00000494612 BHLHA9Q7RTU4 235 aa5.69□□□□□ -1.5
SMC4-224ENST00000494612 APBB1IPQ7Z5R6 666 aaPredicted RBP5.69□□□□□ -1.5
SMC4-224ENST00000494612 MB21D1Q8N884 522 aa5.69□□□□□ -1.5
SMC4-224ENST00000494612 ZBTB34Q8NCN2 500 aa5.69□□□□□ -1.5
SMC4-224ENST00000494612 ARL8AQ96BM9 186 aa5.69□□□□□ -1.5
SMC4-224ENST00000494612 MVB12AQ96EY5 273 aa5.69□□□□□ -1.5
SMC4-224ENST00000494612 AIFM3Q96NN9 605 aa5.69□□□□□ -1.5
SMC4-224ENST00000494612 PDCD2LQ9BRP1 358 aa5.69□□□□□ -1.5
SMC4-224ENST00000494612 RIOX1Q9H6W3 641 aa5.69□□□□□ -1.5
SMC4-224ENST00000494612 SIK3Q9Y2K2 1263 aa5.69□□□□□ -1.5
SMC4-224ENST00000494612 PCDHB1Q9Y5F3 818 aa5.69□□□□□ -1.5
SMC4-224ENST00000494612 WNT10BO00744 389 aa5.68□□□□□ -1.5
SMC4-224ENST00000494612 KIF3BO15066 747 aa5.68□□□□□ -1.5
SMC4-224ENST00000494612 ITGA10O75578 1167 aa5.68□□□□□ -1.5
SMC4-224ENST00000494612 ERBB2P04626 1255 aa5.68□□□□□ -1.5
SMC4-224ENST00000494612 ALDH2P05091 517 aa5.68□□□□□ -1.5
SMC4-224ENST00000494612 SLC6A9P48067 706 aa5.68□□□□□ -1.5
SMC4-224ENST00000494612 PTTG1IPP53801 180 aa5.68□□□□□ -1.5
SMC4-224ENST00000494612 TBX4P57082 545 aa5.68□□□□□ -1.5
SMC4-224ENST00000494612 MGAT2Q10469 447 aa5.68□□□□□ -1.5
SMC4-224ENST00000494612 C19orf54Q5BKX5 351 aa5.68□□□□□ -1.5
SMC4-224ENST00000494612 ATAT1Q5SQI0 421 aa5.68□□□□□ -1.5
SMC4-224ENST00000494612 LY6G5CQ5SRR4 150 aa5.68□□□□□ -1.5
SMC4-224ENST00000494612 RSPH3Q86UC2 560 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms