RNA–Protein interactions for RNA: ENST00000494268.1

MSL3-217, Transcript of MSL complex subunit 3, humanhuman

TSL 2

Gene MSL3, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-217ENST00000494268 SEM1Q6ZVN7 128 aa7.44□□□□□ -1.22
MSL3-217ENST00000494268 MED25Q71SY5 747 aa7.44□□□□□ -1.22
MSL3-217ENST00000494268 PLXDC1Q8IUK5 500 aa7.44□□□□□ -1.22
MSL3-217ENST00000494268 CPT1CQ8TCG5 803 aa7.44□□□□□ -1.22
MSL3-217ENST00000494268 VRK1Q99986 396 aaPredicted RBP7.44□□□□□ -1.22
MSL3-217ENST00000494268 TEX101Q9BY14 249 aa7.44□□□□□ -1.22
MSL3-217ENST00000494268 KRTAP9-3Q9BYQ3 159 aa7.44□□□□□ -1.22
MSL3-217ENST00000494268 KRTAP4-9Q9BYQ8 210 aa7.44□□□□□ -1.22
MSL3-217ENST00000494268 ZNF768Q9H5H4 540 aaKnown RBP7.44□□□□□ -1.22
MSL3-217ENST00000494268 CFAP20Q9Y6A4 193 aaKnown RBP7.44□□□□□ -1.22
MSL3-217ENST00000494268 KIAA0391O15091 583 aaKnown RBP7.43□□□□□ -1.22
MSL3-217ENST00000494268 ZNF185O15231 689 aa7.43□□□□□ -1.22
MSL3-217ENST00000494268 TEX33O43247 280 aa7.43□□□□□ -1.22
MSL3-217ENST00000494268 PRSS23O95084 383 aa7.43□□□□□ -1.22
MSL3-217ENST00000494268 POMCP01189 267 aa7.43□□□□□ -1.22
MSL3-217ENST00000494268 SBK3P0C264 359 aa7.43□□□□□ -1.22
MSL3-217ENST00000494268 AKAP5P24588 427 aa7.43□□□□□ -1.22
MSL3-217ENST00000494268 NFE2Q16621 373 aaPredicted RBP7.43□□□□□ -1.22
MSL3-217ENST00000494268 KHDC1Q4VXA5 237 aaKnown RBP7.43□□□□□ -1.22
MSL3-217ENST00000494268 TTC7BQ86TV6 843 aa7.43□□□□□ -1.22
MSL3-217ENST00000494268 CACTINQ8WUQ7 758 aaKnown RBP7.43□□□□□ -1.22
MSL3-217ENST00000494268 NEU1Q99519 415 aa7.43□□□□□ -1.22
MSL3-217ENST00000494268 NUP88Q99567 741 aaPredicted RBP7.43□□□□□ -1.22
MSL3-217ENST00000494268 ZNF747Q9BV97 191 aa7.43□□□□□ -1.22
MSL3-217ENST00000494268 PARPBPQ9NWS1 579 aa7.43□□□□□ -1.22
MSL3-217ENST00000494268 NOB1Q9ULX3 412 aaKnown RBP7.43□□□□□ -1.22
MSL3-217ENST00000494268 MGAT1P26572 445 aa7.42□□□□□ -1.22
MSL3-217ENST00000494268 CREMQ03060 361 aa7.42□□□□□ -1.22
MSL3-217ENST00000494268 TLE1Q04724 770 aa7.42□□□□□ -1.22
MSL3-217ENST00000494268 ZNF267Q14586 743 aaPredicted RBP7.42□□□□□ -1.22
MSL3-217ENST00000494268 FAM102AQ5T9C2 384 aaPredicted RBP7.42□□□□□ -1.22
MSL3-217ENST00000494268 LRGUKQ96M69 825 aa7.42□□□□□ -1.22
MSL3-217ENST00000494268 C11orf54Q9H0W9 315 aaPredicted RBP7.42□□□□□ -1.22
MSL3-217ENST00000494268 GSTO2Q9H4Y5 243 aa7.42□□□□□ -1.22
MSL3-217ENST00000494268 TRPM5Q9NZQ8 1165 aa7.42□□□□□ -1.22
MSL3-217ENST00000494268 PNMA8BQ9ULN7 279 aaPredicted RBP7.42□□□□□ -1.22
MSL3-217ENST00000494268 PRPF3O43395 683 aaKnown RBP7.41□□□□□ -1.22
MSL3-217ENST00000494268 AP1G1O43747 822 aa7.41□□□□□ -1.22
MSL3-217ENST00000494268 RFPL1O75677 317 aa7.41□□□□□ -1.22
MSL3-217ENST00000494268 ITGB1P05556 798 aa7.41□□□□□ -1.22
MSL3-217ENST00000494268 VCAM1P19320 739 aa7.41□□□□□ -1.22
MSL3-217ENST00000494268 TNFRSF1AP19438 455 aa7.41□□□□□ -1.22
MSL3-217ENST00000494268 NR4A1P22736 598 aa7.41□□□□□ -1.22
MSL3-217ENST00000494268 SLC6A4P31645 630 aa7.41□□□□□ -1.22
MSL3-217ENST00000494268 FAM189BP81408 668 aa7.41□□□□□ -1.22
MSL3-217ENST00000494268 SNAPC2Q13487 334 aa7.41□□□□□ -1.22
MSL3-217ENST00000494268 RAB39AQ14964 217 aa7.41□□□□□ -1.22
MSL3-217ENST00000494268 MIIPQ5JXC2 388 aa7.41□□□□□ -1.22
MSL3-217ENST00000494268 DACT2Q5SW24 774 aa7.41□□□□□ -1.22
MSL3-217ENST00000494268 IFIT1BQ5T764 474 aaKnown RBP7.41□□□□□ -1.22
MSL3-217ENST00000494268 IGFL4Q6B9Z1 124 aa7.41□□□□□ -1.22
MSL3-217ENST00000494268 GADL1Q6ZQY3 521 aa7.41□□□□□ -1.22
MSL3-217ENST00000494268 HPS3Q969F9 1004 aa7.41□□□□□ -1.22
MSL3-217ENST00000494268 CAMKK2Q96RR4 588 aa7.41□□□□□ -1.22
MSL3-217ENST00000494268 VPS11Q9H270 941 aa7.41□□□□□ -1.22
MSL3-217ENST00000494268 SLC12A5Q9H2X9 1139 aa7.41□□□□□ -1.22
MSL3-217ENST00000494268 SLC2A4RGQ9NR83 387 aa7.41□□□□□ -1.22
MSL3-217ENST00000494268 FAM30AQ9NZY2 134 aa7.41□□□□□ -1.22
MSL3-217ENST00000494268 CALCOCO1Q9P1Z2 691 aa7.41□□□□□ -1.22
MSL3-217ENST00000494268 CHST2Q9Y4C5 530 aa7.41□□□□□ -1.22
MSL3-217ENST00000494268 USP15Q9Y4E8 981 aaPredicted RBP7.41□□□□□ -1.22
MSL3-217ENST00000494268 PCDHA3Q9Y5H8 950 aa7.41□□□□□ -1.22
MSL3-217ENST00000494268 GRM6O15303 877 aa7.4□□□□□ -1.22
MSL3-217ENST00000494268 RECQL4O94761 1208 aa7.4□□□□□ -1.22
MSL3-217ENST00000494268 SCGB1D2O95969 90 aa7.4□□□□□ -1.22
MSL3-217ENST00000494268 RPLP2P05387 115 aaKnown RBP7.4□□□□□ -1.22
MSL3-217ENST00000494268 MALP21145 153 aa7.4□□□□□ -1.22
MSL3-217ENST00000494268 CYP2C19P33261 490 aa7.4□□□□□ -1.22
MSL3-217ENST00000494268 PGS1Q32NB8 556 aa7.4□□□□□ -1.22
MSL3-217ENST00000494268 PDCD4Q53EL6 469 aaKnown RBP7.4□□□□□ -1.22
MSL3-217ENST00000494268 TSHZ3Q63HK5 1081 aa7.4□□□□□ -1.22
MSL3-217ENST00000494268 GRAMD1CQ8IYS0 662 aa7.4□□□□□ -1.22
MSL3-217ENST00000494268 CHPFQ8IZ52 775 aa7.4□□□□□ -1.22
MSL3-217ENST00000494268 MVB12AQ96EY5 273 aa7.4□□□□□ -1.22
MSL3-217ENST00000494268 ZNF341Q9BYN7 854 aa7.4□□□□□ -1.22
MSL3-217ENST00000494268 ANLNQ9NQW6 1124 aa7.4□□□□□ -1.22
MSL3-217ENST00000494268 KLHL42Q9P2K6 505 aa7.4□□□□□ -1.22
MSL3-217ENST00000494268 TRIM24O15164 1050 aa7.39□□□□□ -1.23
MSL3-217ENST00000494268 RPS6KA4O75676 772 aa7.39□□□□□ -1.23
MSL3-217ENST00000494268 ZFP36P26651 326 aaKnown RBP7.39□□□□□ -1.23
MSL3-217ENST00000494268 PPP2R5AQ15172 486 aa7.39□□□□□ -1.23
MSL3-217ENST00000494268 LSM12Q3MHD2 195 aaKnown RBP7.39□□□□□ -1.23
MSL3-217ENST00000494268 FLYWCH1Q4VC44 716 aa7.39□□□□□ -1.23
MSL3-217ENST00000494268 ATAT1Q5SQI0 421 aa7.39□□□□□ -1.23
MSL3-217ENST00000494268 FNDC7Q5VTL7 733 aa7.39□□□□□ -1.23
MSL3-217ENST00000494268 DBX2Q6ZNG2 339 aa7.39□□□□□ -1.23
MSL3-217ENST00000494268 GDF7Q7Z4P5 450 aa7.39□□□□□ -1.23
MSL3-217ENST00000494268 ZNF276Q8N554 614 aa7.39□□□□□ -1.23
MSL3-217ENST00000494268 FAM193BQ96PV7 902 aaPredicted RBP7.39□□□□□ -1.23
MSL3-217ENST00000494268 PUS7Q96PZ0 661 aaKnown RBP7.39□□□□□ -1.23
MSL3-217ENST00000494268 DCLRE1CQ96SD1 692 aaKnown RBP7.39□□□□□ -1.23
MSL3-217ENST00000494268 CCDC78A2IDD5 438 aa7.38□□□□□ -1.23
MSL3-217ENST00000494268 DTNBO60941 627 aa7.38□□□□□ -1.23
MSL3-217ENST00000494268 OFD1O75665 1012 aa7.38□□□□□ -1.23
MSL3-217ENST00000494268 ALDH2P05091 517 aa7.38□□□□□ -1.23
MSL3-217ENST00000494268 CD1AP06126 327 aa7.38□□□□□ -1.23
MSL3-217ENST00000494268 LPOP22079 712 aaPredicted RBP7.38□□□□□ -1.23
MSL3-217ENST00000494268 MAP2K6P52564 334 aa7.38□□□□□ -1.23
MSL3-217ENST00000494268 PABPC1LQ4VXU2 614 aaKnown RBP7.38□□□□□ -1.23
MSL3-217ENST00000494268 AGAP9Q5VTM2 703 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms