RNA–Protein interactions for RNA: ENST00000494016.1

CPSF7-213, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-213ENST00000494016 hCG_2014768A0A024R1R8 64 aa6.6□□□□□ -1.35
CPSF7-213ENST00000494016 HMGB1P1B2RPK0 211 aaPredicted RBP6.6□□□□□ -1.35
CPSF7-213ENST00000494016 TRAF5O00463 557 aa6.6□□□□□ -1.35
CPSF7-213ENST00000494016 EPHB6O15197 1021 aa6.6□□□□□ -1.35
CPSF7-213ENST00000494016 WDR46O15213 610 aaKnown RBP6.6□□□□□ -1.35
CPSF7-213ENST00000494016 TNRC18O15417 2968 aaPredicted RBP6.6□□□□□ -1.35
CPSF7-213ENST00000494016 URI1O94763 535 aaPredicted RBP6.6□□□□□ -1.35
CPSF7-213ENST00000494016 NDUFA10O95299 355 aa6.6□□□□□ -1.35
CPSF7-213ENST00000494016 HSPA8P11142 646 aaKnown RBP6.6□□□□□ -1.35
CPSF7-213ENST00000494016 HNRNPH3P31942 346 aaKnown RBP6.6□□□□□ -1.35
CPSF7-213ENST00000494016 EPHX2P34913 555 aa6.6□□□□□ -1.35
CPSF7-213ENST00000494016 LIG3P49916 1009 aa6.6□□□□□ -1.35
CPSF7-213ENST00000494016 CASP5P51878 434 aa6.6□□□□□ -1.35
CPSF7-213ENST00000494016 HERVK_113P62684 666 aa6.6□□□□□ -1.35
CPSF7-213ENST00000494016 ZBED6P86452 979 aa6.6□□□□□ -1.35
CPSF7-213ENST00000494016 FKBP3Q00688 224 aaKnown RBP6.6□□□□□ -1.35
CPSF7-213ENST00000494016 ID3Q02535 119 aa6.6□□□□□ -1.35
CPSF7-213ENST00000494016 RAD51AP2Q09MP3 1159 aa6.6□□□□□ -1.35
CPSF7-213ENST00000494016 CTTNQ14247 550 aaKnown RBP6.6□□□□□ -1.35
CPSF7-213ENST00000494016 HSP90AA2PQ14568 343 aaPredicted RBP6.6□□□□□ -1.35
CPSF7-213ENST00000494016 EPHA7Q15375 998 aa6.6□□□□□ -1.35
CPSF7-213ENST00000494016 MAN2A1Q16706 1144 aa6.6□□□□□ -1.35
CPSF7-213ENST00000494016 CEP55Q53EZ4 464 aa6.6□□□□□ -1.35
CPSF7-213ENST00000494016 SGO2Q562F6 1265 aa6.6□□□□□ -1.35
CPSF7-213ENST00000494016 MUM1L1Q5H9M0 696 aa6.6□□□□□ -1.35
CPSF7-213ENST00000494016 HAUS3Q68CZ6 603 aa6.6□□□□□ -1.35
CPSF7-213ENST00000494016 RINT1Q6NUQ1 792 aa6.6□□□□□ -1.35
CPSF7-213ENST00000494016 DPY19L2P1Q6NXN4 242 aa6.6□□□□□ -1.35
CPSF7-213ENST00000494016 AGMOQ6ZNB7 445 aa6.6□□□□□ -1.35
CPSF7-213ENST00000494016 C1orf186Q6ZWK4 172 aa6.6□□□□□ -1.35
CPSF7-213ENST00000494016 NELFCDQ8IXH7 590 aa6.6□□□□□ -1.35
CPSF7-213ENST00000494016 LPAR1Q92633 364 aa6.6□□□□□ -1.35
CPSF7-213ENST00000494016 TAAR1Q96RJ0 339 aa6.6□□□□□ -1.35
CPSF7-213ENST00000494016 TSG101Q99816 390 aa6.6□□□□□ -1.35
CPSF7-213ENST00000494016 SLF1Q9BQI6 1058 aa6.6□□□□□ -1.35
CPSF7-213ENST00000494016 REEP2Q9BRK0 252 aa6.6□□□□□ -1.35
CPSF7-213ENST00000494016 UNC45AQ9H3U1 944 aa6.6□□□□□ -1.35
CPSF7-213ENST00000494016 SLC38A10Q9HBR0 1119 aa6.6□□□□□ -1.35
CPSF7-213ENST00000494016 TUFT1Q9NNX1 390 aa6.6□□□□□ -1.35
CPSF7-213ENST00000494016 KLHL42Q9P2K6 505 aa6.6□□□□□ -1.35
CPSF7-213ENST00000494016 WRAP73Q9P2S5 460 aaPredicted RBP6.6□□□□□ -1.35
CPSF7-213ENST00000494016 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.6□□□□□ -1.35
CPSF7-213ENST00000494016 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.6□□□□□ -1.35
CPSF7-213ENST00000494016 UBIAD1Q9Y5Z9 338 aa6.6□□□□□ -1.35
CPSF7-213ENST00000494016 V9GYY5 206 aaPredicted RBP6.6□□□□□ -1.35
CPSF7-213ENST00000494016 RLFQ13129 1914 aa6.6□□□□□ -1.35
CPSF7-213ENST00000494016 PARP14Q460N5 1801 aa6.6□□□□□ -1.35
CPSF7-213ENST00000494016 IQCA1LA6NCM1 817 aa6.59□□□□□ -1.35
CPSF7-213ENST00000494016 RSPH10B2B2RC85 870 aa6.59□□□□□ -1.35
CPSF7-213ENST00000494016 PES1O00541 588 aaKnown RBP6.59□□□□□ -1.35
CPSF7-213ENST00000494016 NFIBO00712 420 aa6.59□□□□□ -1.35
CPSF7-213ENST00000494016 NOL4O94818 638 aa6.59□□□□□ -1.35
CPSF7-213ENST00000494016 PRPF6O94906 941 aaKnown RBP6.59□□□□□ -1.35
CPSF7-213ENST00000494016 KRT18P05783 430 aaKnown RBP6.59□□□□□ -1.35
CPSF7-213ENST00000494016 RSPH10BP0C881 870 aa6.59□□□□□ -1.35
CPSF7-213ENST00000494016 MYBP10242 640 aa6.59□□□□□ -1.35
CPSF7-213ENST00000494016 ITGB5P18084 799 aa6.59□□□□□ -1.35
CPSF7-213ENST00000494016 MUTP22033 750 aa6.59□□□□□ -1.35
CPSF7-213ENST00000494016 MAP4P27816 1152 aaKnown RBP6.59□□□□□ -1.35
CPSF7-213ENST00000494016 EPS15P42566 896 aa6.59□□□□□ -1.35
CPSF7-213ENST00000494016 MRPS9P82933 396 aaKnown RBP6.59□□□□□ -1.35
CPSF7-213ENST00000494016 CDK17Q00537 523 aa6.59□□□□□ -1.35
CPSF7-213ENST00000494016 MAP2K1Q02750 393 aaPredicted RBP6.59□□□□□ -1.35
CPSF7-213ENST00000494016 CYP4A11Q02928 519 aa6.59□□□□□ -1.35
CPSF7-213ENST00000494016 ADAM9Q13443 819 aa6.59□□□□□ -1.35
CPSF7-213ENST00000494016 KNOP1Q1ED39 458 aaKnown RBP6.59□□□□□ -1.35
CPSF7-213ENST00000494016 BMT2Q1RMZ1 405 aa6.59□□□□□ -1.35
CPSF7-213ENST00000494016 ERCC6LQ2NKX8 1250 aa6.59□□□□□ -1.35
CPSF7-213ENST00000494016 EDRF1Q3B7T1 1238 aa6.59□□□□□ -1.35
CPSF7-213ENST00000494016 ZC3H12AQ5D1E8 599 aaKnown RBP6.59□□□□□ -1.35
CPSF7-213ENST00000494016 LDLRAD1Q5T700 205 aa6.59□□□□□ -1.35
CPSF7-213ENST00000494016 LRCH2Q5VUJ6 765 aa6.59□□□□□ -1.35
CPSF7-213ENST00000494016 PRAMEF18Q5VWM3 479 aa6.59□□□□□ -1.35
CPSF7-213ENST00000494016 CDPF1Q6NVV7 123 aa6.59□□□□□ -1.35
CPSF7-213ENST00000494016 BEND4Q6ZU67 534 aa6.59□□□□□ -1.35
CPSF7-213ENST00000494016 NIPA1Q7RTP0 329 aa6.59□□□□□ -1.35
CPSF7-213ENST00000494016 MTERF4Q7Z6M4 381 aaKnown RBP6.59□□□□□ -1.35
CPSF7-213ENST00000494016 SFR1Q86XK3 245 aa6.59□□□□□ -1.35
CPSF7-213ENST00000494016 MCF2L2Q86YR7 1114 aa6.59□□□□□ -1.35
CPSF7-213ENST00000494016 TRIM59Q8IWR1 403 aa6.59□□□□□ -1.35
CPSF7-213ENST00000494016 TPH2Q8IWU9 490 aa6.59□□□□□ -1.35
CPSF7-213ENST00000494016 GPC2Q8N158 579 aa6.59□□□□□ -1.35
CPSF7-213ENST00000494016 SAMD3Q8N6K7 520 aa6.59□□□□□ -1.35
CPSF7-213ENST00000494016 REPS2Q8NFH8 660 aa6.59□□□□□ -1.35
CPSF7-213ENST00000494016 IL31RAQ8NI17 732 aa6.59□□□□□ -1.35
CPSF7-213ENST00000494016 SYTL5Q8TDW5 730 aaPredicted RBP6.59□□□□□ -1.35
CPSF7-213ENST00000494016 PIGOQ8TEQ8 1089 aa6.59□□□□□ -1.35
CPSF7-213ENST00000494016 EZH1Q92800 747 aaPredicted RBP6.59□□□□□ -1.35
CPSF7-213ENST00000494016 GAL3ST3Q96A11 431 aa6.59□□□□□ -1.35
CPSF7-213ENST00000494016 HOOK2Q96ED9 719 aa6.59□□□□□ -1.35
CPSF7-213ENST00000494016 FAM83CQ9BQN1 747 aa6.59□□□□□ -1.35
CPSF7-213ENST00000494016 CARD6Q9BX69 1037 aa6.59□□□□□ -1.35
CPSF7-213ENST00000494016 EDEM3Q9BZQ6 932 aa6.59□□□□□ -1.35
CPSF7-213ENST00000494016 BHMT2Q9H2M3 363 aa6.59□□□□□ -1.35
CPSF7-213ENST00000494016 C7orf69Q9H7B7 122 aa6.59□□□□□ -1.35
CPSF7-213ENST00000494016 EHMT1Q9H9B1 1298 aa6.59□□□□□ -1.35
CPSF7-213ENST00000494016 NHEJ1Q9H9Q4 299 aaPredicted RBP6.59□□□□□ -1.35
CPSF7-213ENST00000494016 RAVER2Q9HCJ3 691 aaKnown RBP6.59□□□□□ -1.35
CPSF7-213ENST00000494016 LZTFL1Q9NQ48 299 aa6.59□□□□□ -1.35
CPSF7-213ENST00000494016 FAM105AQ9NUU6 356 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms