RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 RHOXF2Q9BQY4 288 aa11.53□□□□□ -0.56
PDLIM1-205ENST00000493949 NUCKS1Q9H1E3 243 aaKnown RBP11.53□□□□□ -0.56
PDLIM1-205ENST00000493949 EPC1Q9H2F5 836 aa11.53□□□□□ -0.56
PDLIM1-205ENST00000493949 DEF6Q9H4E7 631 aa11.53□□□□□ -0.56
PDLIM1-205ENST00000493949 NGRNQ9NPE2 291 aaKnown RBP11.53□□□□□ -0.56
PDLIM1-205ENST00000493949 LUC7LQ9NQ29 371 aaKnown RBP11.53□□□□□ -0.56
PDLIM1-205ENST00000493949 GEMIN8Q9NWZ8 242 aaKnown RBP11.53□□□□□ -0.56
PDLIM1-205ENST00000493949 TMEM260Q9NX78 707 aa11.53□□□□□ -0.56
PDLIM1-205ENST00000493949 MAP3K20Q9NYL2 800 aaKnown RBP11.53□□□□□ -0.56
PDLIM1-205ENST00000493949 MRPL11Q9Y3B7 192 aaKnown RBP11.53□□□□□ -0.56
PDLIM1-205ENST00000493949 MIA3Q5JRA6 1907 aa11.52□□□□□ -0.56
PDLIM1-205ENST00000493949 CNOT1A5YKK6 2376 aaKnown RBP11.52□□□□□ -0.57
PDLIM1-205ENST00000493949 MBLAC1A4D2B0 266 aaPredicted RBP11.52□□□□□ -0.57
PDLIM1-205ENST00000493949 GOLGA6CA6NDK9 693 aa11.52□□□□□ -0.57
PDLIM1-205ENST00000493949 GOLGA6BA6NDN3 693 aa11.52□□□□□ -0.57
PDLIM1-205ENST00000493949 LRRIQ3A6PVS8 624 aaPredicted RBP11.52□□□□□ -0.57
PDLIM1-205ENST00000493949 PRR5-ARHGAP8B1AHC4 643 aa11.52□□□□□ -0.57
PDLIM1-205ENST00000493949 EBAG9O00559 213 aa11.52□□□□□ -0.57
PDLIM1-205ENST00000493949 SYF2O95926 243 aaKnown RBP11.52□□□□□ -0.57
PDLIM1-205ENST00000493949 EOMESO95936 686 aa11.52□□□□□ -0.57
PDLIM1-205ENST00000493949 RPLP2P05387 115 aaKnown RBP11.52□□□□□ -0.57
PDLIM1-205ENST00000493949 GOLGA6DP0CG33 693 aa11.52□□□□□ -0.57
PDLIM1-205ENST00000493949 SCG2P13521 617 aa11.52□□□□□ -0.57
PDLIM1-205ENST00000493949 CD52P31358 61 aa11.52□□□□□ -0.57
PDLIM1-205ENST00000493949 GATMP50440 423 aa11.52□□□□□ -0.57
PDLIM1-205ENST00000493949 ARHGAP8P85298 464 aa11.52□□□□□ -0.57
PDLIM1-205ENST00000493949 KIF5AQ12840 1032 aa11.52□□□□□ -0.57
PDLIM1-205ENST00000493949 TDGQ13569 410 aa11.52□□□□□ -0.57
PDLIM1-205ENST00000493949 QRICH1Q2TAL8 776 aa11.52□□□□□ -0.57
PDLIM1-205ENST00000493949 IFIT1BQ5T764 474 aaKnown RBP11.52□□□□□ -0.57
PDLIM1-205ENST00000493949 KLHL10Q6JEL2 608 aa11.52□□□□□ -0.57
PDLIM1-205ENST00000493949 LLGL2Q6P1M3 1020 aa11.52□□□□□ -0.57
PDLIM1-205ENST00000493949 CCNI2Q6ZMN8 369 aaPredicted RBP11.52□□□□□ -0.57
PDLIM1-205ENST00000493949 MMS22LQ6ZRQ5 1243 aa11.52□□□□□ -0.57
PDLIM1-205ENST00000493949 ADGRF4Q8IZF3 695 aa11.52□□□□□ -0.57
PDLIM1-205ENST00000493949 COLGALT1Q8NBJ5 622 aa11.52□□□□□ -0.57
PDLIM1-205ENST00000493949 GIMAP8Q8ND71 665 aaPredicted RBP11.52□□□□□ -0.57
PDLIM1-205ENST00000493949 AENQ8WTP8 325 aaKnown RBP11.52□□□□□ -0.57
PDLIM1-205ENST00000493949 GPR20Q99678 358 aa11.52□□□□□ -0.57
PDLIM1-205ENST00000493949 IRX2Q9BZI1 471 aaPredicted RBP11.52□□□□□ -0.57
PDLIM1-205ENST00000493949 TTYH3Q9C0H2 523 aa11.52□□□□□ -0.57
PDLIM1-205ENST00000493949 SENP2Q9HC62 589 aa11.52□□□□□ -0.57
PDLIM1-205ENST00000493949 VAT1LQ9HCJ6 419 aa11.52□□□□□ -0.57
PDLIM1-205ENST00000493949 CYP26B1Q9NR63 512 aa11.52□□□□□ -0.57
PDLIM1-205ENST00000493949 EXOC1Q9NV70 894 aa11.52□□□□□ -0.57
PDLIM1-205ENST00000493949 GOLGA6AQ9NYA3 693 aa11.52□□□□□ -0.57
PDLIM1-205ENST00000493949 CDY2AQ9Y6F7 541 aa11.52□□□□□ -0.57
PDLIM1-205ENST00000493949 CNTNAP5Q8WYK1 1306 aa11.52□□□□□ -0.57
PDLIM1-205ENST00000493949 ASPMQ8IZT6 3477 aa11.51□□□□□ -0.57
PDLIM1-205ENST00000493949 PATJQ8NI35 1801 aa11.51□□□□□ -0.57
PDLIM1-205ENST00000493949 A0A087X0B3 334 aa11.51□□□□□ -0.57
PDLIM1-205ENST00000493949 HIDE1A8MVS5 230 aa11.51□□□□□ -0.57
PDLIM1-205ENST00000493949 NOP56O00567 594 aaKnown RBP11.51□□□□□ -0.57
PDLIM1-205ENST00000493949 CFBP00751 764 aa11.51□□□□□ -0.57
PDLIM1-205ENST00000493949 SP9P0CG40 484 aa11.51□□□□□ -0.57
PDLIM1-205ENST00000493949 GUCY2CP25092 1073 aa11.51□□□□□ -0.57
PDLIM1-205ENST00000493949 AFMP43652 599 aa11.51□□□□□ -0.57
PDLIM1-205ENST00000493949 PTGDRQ13258 359 aa11.51□□□□□ -0.57
PDLIM1-205ENST00000493949 DRP2Q13474 957 aa11.51□□□□□ -0.57
PDLIM1-205ENST00000493949 PGM5Q15124 567 aa11.51□□□□□ -0.57
PDLIM1-205ENST00000493949 SPA17Q15506 151 aa11.51□□□□□ -0.57
PDLIM1-205ENST00000493949 PFKFB3Q16875 520 aaPredicted RBP11.51□□□□□ -0.57
PDLIM1-205ENST00000493949 SPECC1Q5M775 1068 aa11.51□□□□□ -0.57
PDLIM1-205ENST00000493949 PLPP4Q5VZY2 271 aa11.51□□□□□ -0.57
PDLIM1-205ENST00000493949 METTL7BQ6UX53 244 aa11.51□□□□□ -0.57
PDLIM1-205ENST00000493949 YTHDF3Q7Z739 585 aaKnown RBP11.51□□□□□ -0.57
PDLIM1-205ENST00000493949 TRIM50Q86XT4 487 aa11.51□□□□□ -0.57
PDLIM1-205ENST00000493949 THNSL1Q8IYQ7 743 aa11.51□□□□□ -0.57
PDLIM1-205ENST00000493949 GRAMD1CQ8IYS0 662 aa11.51□□□□□ -0.57
PDLIM1-205ENST00000493949 SIX5Q8N196 739 aa11.51□□□□□ -0.57
PDLIM1-205ENST00000493949 MREGQ8N565 214 aa11.51□□□□□ -0.57
PDLIM1-205ENST00000493949 RNF10Q8N5U6 811 aaKnown RBP11.51□□□□□ -0.57
PDLIM1-205ENST00000493949 SAMD3Q8N6K7 520 aa11.51□□□□□ -0.57
PDLIM1-205ENST00000493949 NOA1Q8NC60 698 aaKnown RBP11.51□□□□□ -0.57
PDLIM1-205ENST00000493949 CPLX3Q8WVH0 158 aa11.51□□□□□ -0.57
PDLIM1-205ENST00000493949 SECISBP2LQ93073 1101 aaKnown RBP11.51□□□□□ -0.57
PDLIM1-205ENST00000493949 EPSTI1Q96J88 318 aa11.51□□□□□ -0.57
PDLIM1-205ENST00000493949 TCF25Q9BQ70 676 aa11.51□□□□□ -0.57
PDLIM1-205ENST00000493949 RTKNQ9BST9 563 aa11.51□□□□□ -0.57
PDLIM1-205ENST00000493949 MYL10Q9BUA6 226 aa11.51□□□□□ -0.57
PDLIM1-205ENST00000493949 DISC1Q9NRI5 854 aa11.51□□□□□ -0.57
PDLIM1-205ENST00000493949 WNT16Q9UBV4 365 aa11.51□□□□□ -0.57
PDLIM1-205ENST00000493949 REXO2Q9Y3B8 237 aaKnown RBP11.51□□□□□ -0.57
PDLIM1-205ENST00000493949 HCFC2Q9Y5Z7 792 aa11.51□□□□□ -0.57
PDLIM1-205ENST00000493949 DOCK8Q8NF50 2099 aa11.51□□□□□ -0.57
PDLIM1-205ENST00000493949 EVPLQ92817 2033 aa11.5□□□□□ -0.57
PDLIM1-205ENST00000493949 TTC26A0AVF1 554 aa11.5□□□□□ -0.57
PDLIM1-205ENST00000493949 CES2O00748 559 aa11.5□□□□□ -0.57
PDLIM1-205ENST00000493949 PJA2O43164 708 aa11.5□□□□□ -0.57
PDLIM1-205ENST00000493949 PPP1R11O60927 126 aaPredicted RBP11.5□□□□□ -0.57
PDLIM1-205ENST00000493949 HOXB1P14653 301 aaPredicted RBP11.5□□□□□ -0.57
PDLIM1-205ENST00000493949 ATP2B1P20020 1258 aa11.5□□□□□ -0.57
PDLIM1-205ENST00000493949 HOXA13P31271 388 aaPredicted RBP11.5□□□□□ -0.57
PDLIM1-205ENST00000493949 CCT6AP40227 531 aaKnown RBP11.5□□□□□ -0.57
PDLIM1-205ENST00000493949 STAT6P42226 847 aa11.5□□□□□ -0.57
PDLIM1-205ENST00000493949 MRPS6P82932 125 aaKnown RBP11.5□□□□□ -0.57
PDLIM1-205ENST00000493949 AMPD3Q01432 767 aa11.5□□□□□ -0.57
PDLIM1-205ENST00000493949 TBC1D8BQ0IIM8 1120 aa11.5□□□□□ -0.57
PDLIM1-205ENST00000493949 TROAPQ12815 778 aa11.5□□□□□ -0.57
PDLIM1-205ENST00000493949 NEDD9Q14511 834 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms