RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 MTO1Q9Y2Z2 717 aaKnown RBP8.26□□□□□ -1.09
BRCA1-221ENST00000493795 C3orf70A6NLC5 250 aaPredicted RBP8.25□□□□□ -1.09
BRCA1-221ENST00000493795 ZNF839A8K0R7 811 aa8.25□□□□□ -1.09
BRCA1-221ENST00000493795 CENPXA8MT69 81 aa8.25□□□□□ -1.09
BRCA1-221ENST00000493795 FAM25AB3EWG3 89 aa8.25□□□□□ -1.09
BRCA1-221ENST00000493795 FAM25CB3EWG5 89 aa8.25□□□□□ -1.09
BRCA1-221ENST00000493795 FAM25GB3EWG6 89 aa8.25□□□□□ -1.09
BRCA1-221ENST00000493795 FAM47E-STBD1D6RA91 191 aa8.25□□□□□ -1.09
BRCA1-221ENST00000493795 AIM2O14862 343 aa8.25□□□□□ -1.09
BRCA1-221ENST00000493795 NDUFS3O75489 264 aa8.25□□□□□ -1.09
BRCA1-221ENST00000493795 ADORA2BP29275 332 aa8.25□□□□□ -1.09
BRCA1-221ENST00000493795 RGS2P41220 211 aa8.25□□□□□ -1.09
BRCA1-221ENST00000493795 CDK17Q00537 523 aa8.25□□□□□ -1.09
BRCA1-221ENST00000493795 ZNF211Q13398 564 aaPredicted RBP8.25□□□□□ -1.09
BRCA1-221ENST00000493795 ARL6IP4Q66PJ3 421 aaKnown RBP8.25□□□□□ -1.09
BRCA1-221ENST00000493795 TWF2Q6IBS0 349 aaKnown RBP8.25□□□□□ -1.09
BRCA1-221ENST00000493795 UNC13DQ70J99 1090 aa8.25□□□□□ -1.09
BRCA1-221ENST00000493795 DNAJC10Q8IXB1 793 aa8.25□□□□□ -1.09
BRCA1-221ENST00000493795 OR8H2Q8N162 312 aa8.25□□□□□ -1.09
BRCA1-221ENST00000493795 XXYLT1Q8NBI6 393 aa8.25□□□□□ -1.09
BRCA1-221ENST00000493795 LINC00301Q8NCQ3 95 aa8.25□□□□□ -1.09
BRCA1-221ENST00000493795 PPP1R2P1Q96PQ5 205 aa8.25□□□□□ -1.09
BRCA1-221ENST00000493795 ABHD10Q9NUJ1 306 aa8.25□□□□□ -1.09
BRCA1-221ENST00000493795 IL1RAPL1Q9NZN1 696 aa8.25□□□□□ -1.09
BRCA1-221ENST00000493795 TUBGCP4Q9UGJ1 667 aa8.25□□□□□ -1.09
BRCA1-221ENST00000493795 RPRD2Q5VT52 1461 aaKnown RBP8.25□□□□□ -1.09
BRCA1-221ENST00000493795 DARSP14868 501 aaKnown RBP8.25□□□□□ -1.09
BRCA1-221ENST00000493795 FLT3P36888 993 aa8.25□□□□□ -1.09
BRCA1-221ENST00000493795 HIST2H2ACQ16777 129 aaPredicted RBP8.25□□□□□ -1.09
BRCA1-221ENST00000493795 ANKS6Q68DC2 871 aa8.25□□□□□ -1.09
BRCA1-221ENST00000493795 HIST2H2AA3Q6FI13 130 aa8.25□□□□□ -1.09
BRCA1-221ENST00000493795 KRT74Q7RTS7 529 aa8.25□□□□□ -1.09
BRCA1-221ENST00000493795 LRRC49Q8IUZ0 686 aa8.25□□□□□ -1.09
BRCA1-221ENST00000493795 DPP10Q8N608 796 aa8.25□□□□□ -1.09
BRCA1-221ENST00000493795 SHCBP1Q8NEM2 672 aa8.25□□□□□ -1.09
BRCA1-221ENST00000493795 RNASE11Q8TAA1 199 aaKnown RBP8.25□□□□□ -1.09
BRCA1-221ENST00000493795 COA7Q96BR5 231 aa8.25□□□□□ -1.09
BRCA1-221ENST00000493795 CLMNQ96JQ2 1002 aa8.25□□□□□ -1.09
BRCA1-221ENST00000493795 EPN3Q9H201 632 aa8.25□□□□□ -1.09
BRCA1-221ENST00000493795 RAD18Q9NS91 495 aa8.25□□□□□ -1.09
BRCA1-221ENST00000493795 PARVAQ9NVD7 372 aa8.25□□□□□ -1.09
BRCA1-221ENST00000493795 CYP39A1Q9NYL5 469 aa8.25□□□□□ -1.09
BRCA1-221ENST00000493795 ERAP1Q9NZ08 941 aa8.25□□□□□ -1.09
BRCA1-221ENST00000493795 RPS6KB2Q9UBS0 482 aa8.25□□□□□ -1.09
BRCA1-221ENST00000493795 CTNNAL1Q9UBT7 734 aa8.25□□□□□ -1.09
BRCA1-221ENST00000493795 IFT140Q96RY7 1462 aa8.25□□□□□ -1.09
BRCA1-221ENST00000493795 CLRN2A0PK11 232 aa8.25□□□□□ -1.09
BRCA1-221ENST00000493795 GDF11O95390 407 aa8.25□□□□□ -1.09
BRCA1-221ENST00000493795 NR3C1P04150 777 aa8.25□□□□□ -1.09
BRCA1-221ENST00000493795 UBE2SQ16763 222 aa8.25□□□□□ -1.09
BRCA1-221ENST00000493795 MICALL2Q8IY33 904 aa8.25□□□□□ -1.09
BRCA1-221ENST00000493795 MOSPD2Q8NHP6 518 aa8.25□□□□□ -1.09
BRCA1-221ENST00000493795 THTPAQ9BU02 230 aa8.25□□□□□ -1.09
BRCA1-221ENST00000493795 KIFC1Q9BW19 673 aa8.25□□□□□ -1.09
BRCA1-221ENST00000493795 C2orf40Q9H1Z8 148 aa8.25□□□□□ -1.09
BRCA1-221ENST00000493795 PPCSQ9HAB8 311 aa8.25□□□□□ -1.09
BRCA1-221ENST00000493795 AVENQ9NQS1 362 aaPredicted RBP8.25□□□□□ -1.09
BRCA1-221ENST00000493795 ZNF804BA4D1E1 1349 aa8.25□□□□□ -1.09
BRCA1-221ENST00000493795 PFASO15067 1338 aa8.25□□□□□ -1.09
BRCA1-221ENST00000493795 ZC3H4Q9UPT8 1303 aaKnown RBP8.25□□□□□ -1.09
BRCA1-221ENST00000493795 PIPSLA2A3N6 862 aa8.25□□□□□ -1.09
BRCA1-221ENST00000493795 TNPO2O14787 897 aaKnown RBP8.25□□□□□ -1.09
BRCA1-221ENST00000493795 RGS4P49798 205 aa8.25□□□□□ -1.09
BRCA1-221ENST00000493795 TPI1P60174 286 aa8.25□□□□□ -1.09
BRCA1-221ENST00000493795 MMRN1Q13201 1228 aa8.25□□□□□ -1.09
BRCA1-221ENST00000493795 USP10Q14694 798 aaKnown RBP8.25□□□□□ -1.09
BRCA1-221ENST00000493795 FAM102AQ5T9C2 384 aaPredicted RBP8.25□□□□□ -1.09
BRCA1-221ENST00000493795 SLC25A24Q6NUK1 477 aa8.25□□□□□ -1.09
BRCA1-221ENST00000493795 OOSP2Q86WS3 158 aa8.25□□□□□ -1.09
BRCA1-221ENST00000493795 PTPRN2Q92932 1015 aa8.25□□□□□ -1.09
BRCA1-221ENST00000493795 INTS2Q9H0H0 1204 aaKnown RBP8.25□□□□□ -1.09
BRCA1-221ENST00000493795 SIK2Q9H0K1 926 aa8.25□□□□□ -1.09
BRCA1-221ENST00000493795 ZCWPW1Q9H0M4 648 aa8.25□□□□□ -1.09
BRCA1-221ENST00000493795 TASP1Q9H6P5 420 aa8.25□□□□□ -1.09
BRCA1-221ENST00000493795 CAAP1Q9H8G2 361 aa8.25□□□□□ -1.09
BRCA1-221ENST00000493795 PRDM5Q9NQX1 630 aaPredicted RBP8.25□□□□□ -1.09
BRCA1-221ENST00000493795 USP15Q9Y4E8 981 aaPredicted RBP8.25□□□□□ -1.09
BRCA1-221ENST00000493795 XDHP47989 1333 aa8.25□□□□□ -1.09
BRCA1-221ENST00000493795 PNMA6FA0A0J9YX94 578 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 LINC00854A0A1B0GVQ3 168 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 PPEF1O14829 653 aaPredicted RBP8.24□□□□□ -1.09
BRCA1-221ENST00000493795 ALDH1A1P00352 501 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 KRT6AP02538 564 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 KRT6BP04259 564 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 ALOX15P16050 662 aaPredicted RBP8.24□□□□□ -1.09
BRCA1-221ENST00000493795 BAG6P46379 1132 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 KRT6CP48668 564 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 CDH6P55285 790 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 EIF3EP60228 445 aaKnown RBP8.24□□□□□ -1.09
BRCA1-221ENST00000493795 ANKMY2Q8IV38 441 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 ZNF786Q8N393 782 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 NSUN7Q8NE18 718 aaKnown RBP8.24□□□□□ -1.09
BRCA1-221ENST00000493795 KRT35Q92764 455 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 PRRG3Q9BZD7 231 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 UBXN6Q9BZV1 441 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 HDHD2Q9H0R4 259 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 LATS2Q9NRM7 1088 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 PNMA3Q9UL41 463 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 NUP160Q12769 1436 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 PRXQ9BXM0 1461 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms