RNA–Protein interactions for RNA: ENST00000493691.1

RIOK1-205, Transcript of RIO kinase 1, human

TSL 3

Gene RIOK1, Length 310 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RIOK1-205	ENST00000493691	APOBEC3A	P31941	199 aa	Predicted RBP	4.09	□□□□□ -1.75
RIOK1-205	ENST00000493691	PTTG1IP	P53801	180 aa		4.09	□□□□□ -1.75
RIOK1-205	ENST00000493691	ZNF280A	P59817	542 aa	Predicted RBP	4.09	□□□□□ -1.75
RIOK1-205	ENST00000493691	NHLH2	Q02577	135 aa		4.09	□□□□□ -1.75
RIOK1-205	ENST00000493691	CREM	Q03060	361 aa		4.09	□□□□□ -1.75
RIOK1-205	ENST00000493691	TLE1	Q04724	770 aa		4.09	□□□□□ -1.75
RIOK1-205	ENST00000493691	TOB2	Q14106	344 aa	Predicted RBP	4.09	□□□□□ -1.75
RIOK1-205	ENST00000493691	ZNF267	Q14586	743 aa	Predicted RBP	4.09	□□□□□ -1.75
RIOK1-205	ENST00000493691	UBXN2B	Q14CS0	331 aa		4.09	□□□□□ -1.75
RIOK1-205	ENST00000493691	PPP2R5A	Q15172	486 aa		4.09	□□□□□ -1.75
RIOK1-205	ENST00000493691	ATP2B3	Q16720	1220 aa		4.09	□□□□□ -1.75
RIOK1-205	ENST00000493691	PGS1	Q32NB8	556 aa		4.09	□□□□□ -1.75
RIOK1-205	ENST00000493691	RABL3	Q5HYI8	236 aa		4.09	□□□□□ -1.75
RIOK1-205	ENST00000493691	ATAT1	Q5SQI0	421 aa		4.09	□□□□□ -1.75
RIOK1-205	ENST00000493691	DACT2	Q5SW24	774 aa		4.09	□□□□□ -1.75
RIOK1-205	ENST00000493691	IFIT1B	Q5T764	474 aa	Known RBP	4.09	□□□□□ -1.75
RIOK1-205	ENST00000493691	GADL1	Q6ZQY3	521 aa		4.09	□□□□□ -1.75
RIOK1-205	ENST00000493691	UBE3B	Q7Z3V4	1068 aa		4.09	□□□□□ -1.75
RIOK1-205	ENST00000493691	CHPF	Q8IZ52	775 aa		4.09	□□□□□ -1.75
RIOK1-205	ENST00000493691	HPS3	Q969F9	1004 aa		4.09	□□□□□ -1.75
RIOK1-205	ENST00000493691	MVB12A	Q96EY5	273 aa		4.09	□□□□□ -1.75
RIOK1-205	ENST00000493691	LRGUK	Q96M69	825 aa		4.09	□□□□□ -1.75
RIOK1-205	ENST00000493691	AIFM3	Q96NN9	605 aa		4.09	□□□□□ -1.75
RIOK1-205	ENST00000493691	MAP3K14	Q99558	947 aa		4.09	□□□□□ -1.75
RIOK1-205	ENST00000493691	C11orf54	Q9H0W9	315 aa	Predicted RBP	4.09	□□□□□ -1.75
RIOK1-205	ENST00000493691	ZNF703	Q9H7S9	590 aa	Predicted RBP	4.09	□□□□□ -1.75
RIOK1-205	ENST00000493691	METTL14	Q9HCE5	456 aa	Known RBP	4.09	□□□□□ -1.75
RIOK1-205	ENST00000493691	FBXO34	Q9NWN3	711 aa		4.09	□□□□□ -1.75
RIOK1-205	ENST00000493691	FAM30A	Q9NZY2	134 aa		4.09	□□□□□ -1.75
RIOK1-205	ENST00000493691	CALCOCO1	Q9P1Z2	691 aa		4.09	□□□□□ -1.75
RIOK1-205	ENST00000493691	NOB1	Q9ULX3	412 aa	Known RBP	4.09	□□□□□ -1.75
RIOK1-205	ENST00000493691	SORCS3	Q9UPU3	1222 aa		4.09	□□□□□ -1.75
RIOK1-205	ENST00000493691	TCRBV7S2A1N4T	A0A589	114 aa		4.08	□□□□□ -1.76
RIOK1-205	ENST00000493691	LRRC14B	A6NHZ5	514 aa		4.08	□□□□□ -1.76
RIOK1-205	ENST00000493691	KIAA0391	O15091	583 aa	Known RBP	4.08	□□□□□ -1.76
RIOK1-205	ENST00000493691	TRIM24	O15164	1050 aa		4.08	□□□□□ -1.76
RIOK1-205	ENST00000493691	SLC16A6	O15403	523 aa		4.08	□□□□□ -1.76
RIOK1-205	ENST00000493691	PRPF3	O43395	683 aa	Known RBP	4.08	□□□□□ -1.76
RIOK1-205	ENST00000493691	TSPAN6	O43657	245 aa		4.08	□□□□□ -1.76
RIOK1-205	ENST00000493691	AP1G1	O43747	822 aa		4.08	□□□□□ -1.76
RIOK1-205	ENST00000493691	FAM20B	O75063	409 aa		4.08	□□□□□ -1.76
RIOK1-205	ENST00000493691	SCAF4	O95104	1147 aa	Known RBP	4.08	□□□□□ -1.76
RIOK1-205	ENST00000493691	FTL	P02792	175 aa	Predicted RBP	4.08	□□□□□ -1.76
RIOK1-205	ENST00000493691	AMH	P03971	560 aa		4.08	□□□□□ -1.76
RIOK1-205	ENST00000493691	C1S	P09871	688 aa		4.08	□□□□□ -1.76
RIOK1-205	ENST00000493691	CHN2	P52757	468 aa		4.08	□□□□□ -1.76
RIOK1-205	ENST00000493691	GTF2H3	Q13889	308 aa		4.08	□□□□□ -1.76
RIOK1-205	ENST00000493691	KHDC1	Q4VXA5	237 aa	Known RBP	4.08	□□□□□ -1.76
RIOK1-205	ENST00000493691	FAM102B	Q5T8I3	360 aa		4.08	□□□□□ -1.76
RIOK1-205	ENST00000493691	THEMIS2	Q5TEJ8	643 aa		4.08	□□□□□ -1.76
RIOK1-205	ENST00000493691	METRNL	Q641Q3	311 aa		4.08	□□□□□ -1.76
RIOK1-205	ENST00000493691	CXorf57	Q6NSI4	855 aa	Known RBP	4.08	□□□□□ -1.76
RIOK1-205	ENST00000493691	MED25	Q71SY5	747 aa		4.08	□□□□□ -1.76
RIOK1-205	ENST00000493691	EPM2AIP1	Q7L775	607 aa	Predicted RBP	4.08	□□□□□ -1.76
RIOK1-205	ENST00000493691	GRAMD1C	Q8IYS0	662 aa		4.08	□□□□□ -1.76
RIOK1-205	ENST00000493691	RGMA	Q96B86	450 aa		4.08	□□□□□ -1.76
RIOK1-205	ENST00000493691	ZNF503	Q96F45	646 aa		4.08	□□□□□ -1.76
RIOK1-205	ENST00000493691	PHACTR3	Q96KR7	559 aa		4.08	□□□□□ -1.76
RIOK1-205	ENST00000493691	PLEKHG4B	Q96PX9	1271 aa		4.08	□□□□□ -1.76
RIOK1-205	ENST00000493691	NEU1	Q99519	415 aa		4.08	□□□□□ -1.76
RIOK1-205	ENST00000493691	VRK1	Q99986	396 aa	Predicted RBP	4.08	□□□□□ -1.76
RIOK1-205	ENST00000493691	NMRK2	Q9NPI5	230 aa		4.08	□□□□□ -1.76
RIOK1-205	ENST00000493691	ANLN	Q9NQW6	1124 aa		4.08	□□□□□ -1.76
RIOK1-205	ENST00000493691	PARPBP	Q9NWS1	579 aa		4.08	□□□□□ -1.76
RIOK1-205	ENST00000493691	EIF2B4	Q9UI10	523 aa	Known RBP	4.08	□□□□□ -1.76
RIOK1-205	ENST00000493691	MYRF	Q9Y2G1	1151 aa		4.08	□□□□□ -1.76
RIOK1-205	ENST00000493691	MATN3	O15232	486 aa		4.07	□□□□□ -1.76
RIOK1-205	ENST00000493691	GRM6	O15303	877 aa		4.07	□□□□□ -1.76
RIOK1-205	ENST00000493691	RECQL4	O94761	1208 aa		4.07	□□□□□ -1.76
RIOK1-205	ENST00000493691	ITGB1	P05556	798 aa		4.07	□□□□□ -1.76
RIOK1-205	ENST00000493691	CD1A	P06126	327 aa		4.07	□□□□□ -1.76
RIOK1-205	ENST00000493691	SBK3	P0C264	359 aa		4.07	□□□□□ -1.76
RIOK1-205	ENST00000493691	ALAS1	P13196	640 aa		4.07	□□□□□ -1.76
RIOK1-205	ENST00000493691	HSPA6	P17066	643 aa		4.07	□□□□□ -1.76
RIOK1-205	ENST00000493691	MAL	P21145	153 aa		4.07	□□□□□ -1.76
RIOK1-205	ENST00000493691	LPO	P22079	712 aa	Predicted RBP	4.07	□□□□□ -1.76
RIOK1-205	ENST00000493691	SLC6A2	P23975	617 aa		4.07	□□□□□ -1.76
RIOK1-205	ENST00000493691	MAP2K6	P52564	334 aa		4.07	□□□□□ -1.76
RIOK1-205	ENST00000493691	RNASE9	P60153	205 aa	Known RBP	4.07	□□□□□ -1.76
RIOK1-205	ENST00000493691	DGCR2	P98153	550 aa		4.07	□□□□□ -1.76
RIOK1-205	ENST00000493691	SLC25A3	Q00325	362 aa		4.07	□□□□□ -1.76
RIOK1-205	ENST00000493691	NOG	Q13253	232 aa		4.07	□□□□□ -1.76
RIOK1-205	ENST00000493691	FOXE3	Q13461	319 aa		4.07	□□□□□ -1.76
RIOK1-205	ENST00000493691	SNAPC2	Q13487	334 aa		4.07	□□□□□ -1.76
RIOK1-205	ENST00000493691	ZXDC	Q2QGD7	858 aa	Predicted RBP	4.07	□□□□□ -1.76
RIOK1-205	ENST00000493691	PABPC1L	Q4VXU2	614 aa	Known RBP	4.07	□□□□□ -1.76
RIOK1-205	ENST00000493691	MIIP	Q5JXC2	388 aa		4.07	□□□□□ -1.76
RIOK1-205	ENST00000493691	FAM102A	Q5T9C2	384 aa	Predicted RBP	4.07	□□□□□ -1.76
RIOK1-205	ENST00000493691	NXN	Q6DKJ4	435 aa		4.07	□□□□□ -1.76
RIOK1-205	ENST00000493691	B3GNT9	Q6UX72	402 aa		4.07	□□□□□ -1.76
RIOK1-205	ENST00000493691	C3orf20	Q8ND61	904 aa		4.07	□□□□□ -1.76
RIOK1-205	ENST00000493691	CPT1C	Q8TCG5	803 aa		4.07	□□□□□ -1.76
RIOK1-205	ENST00000493691	DIS3L	Q8TF46	1054 aa	Known RBP	4.07	□□□□□ -1.76
RIOK1-205	ENST00000493691	CACTIN	Q8WUQ7	758 aa	Known RBP	4.07	□□□□□ -1.76
RIOK1-205	ENST00000493691	TSR2	Q969E8	191 aa	Known RBP	4.07	□□□□□ -1.76
RIOK1-205	ENST00000493691	CLIP3	Q96DZ5	547 aa		4.07	□□□□□ -1.76
RIOK1-205	ENST00000493691	DCLRE1C	Q96SD1	692 aa	Known RBP	4.07	□□□□□ -1.76
RIOK1-205	ENST00000493691	GSTO2	Q9H4Y5	243 aa		4.07	□□□□□ -1.76
RIOK1-205	ENST00000493691	MAN1C1	Q9NR34	630 aa		4.07	□□□□□ -1.76
RIOK1-205	ENST00000493691	POLH	Q9Y253	713 aa		4.07	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms