RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 ACKR2O00590 384 aa11.58□□□□□ -0.56
PHACTR4-204ENST00000493669 CLTAP09496 248 aa11.58□□□□□ -0.56
PHACTR4-204ENST00000493669 PROZP22891 400 aa11.58□□□□□ -0.56
PHACTR4-204ENST00000493669 WNT7BP56706 349 aa11.58□□□□□ -0.56
PHACTR4-204ENST00000493669 SLC7A5Q01650 507 aa11.58□□□□□ -0.56
PHACTR4-204ENST00000493669 ZNF653Q96CK0 615 aa11.58□□□□□ -0.56
PHACTR4-204ENST00000493669 FZD8Q9H461 694 aa11.58□□□□□ -0.56
PHACTR4-204ENST00000493669 MCM3APO60318 1980 aa11.57□□□□□ -0.56
PHACTR4-204ENST00000493669 PLXNA1Q9UIW2 1896 aa11.57□□□□□ -0.56
PHACTR4-204ENST00000493669 KRIT1O00522 736 aa11.57□□□□□ -0.56
PHACTR4-204ENST00000493669 ABLIM1O14639 778 aa11.57□□□□□ -0.56
PHACTR4-204ENST00000493669 MAGEB2O15479 319 aa11.57□□□□□ -0.56
PHACTR4-204ENST00000493669 UNGP13051 313 aaPredicted RBP11.57□□□□□ -0.56
PHACTR4-204ENST00000493669 ACO1P21399 889 aaKnown RBP11.57□□□□□ -0.56
PHACTR4-204ENST00000493669 ADORA2AP29274 412 aa11.57□□□□□ -0.56
PHACTR4-204ENST00000493669 POU5F1Q01860 360 aaKnown RBP11.57□□□□□ -0.56
PHACTR4-204ENST00000493669 TAPT1Q6NXT6 567 aa11.57□□□□□ -0.56
PHACTR4-204ENST00000493669 MPZL3Q6UWV2 235 aa11.57□□□□□ -0.56
PHACTR4-204ENST00000493669 PPTC7Q8NI37 304 aa11.57□□□□□ -0.56
PHACTR4-204ENST00000493669 CCDC26Q8TAB7 109 aa11.57□□□□□ -0.56
PHACTR4-204ENST00000493669 ZNF564Q8TBZ8 553 aaPredicted RBP11.57□□□□□ -0.56
PHACTR4-204ENST00000493669 ST7Q9NRC1 585 aa11.57□□□□□ -0.56
PHACTR4-204ENST00000493669 IVNS1ABPQ9Y6Y0 642 aa11.57□□□□□ -0.56
PHACTR4-204ENST00000493669 CCL15-CCL14A0A0B4J2E2 113 aa11.57□□□□□ -0.56
PHACTR4-204ENST00000493669 BTBD19C9JJ37 291 aa11.57□□□□□ -0.56
PHACTR4-204ENST00000493669 BHMG1C9JSJ3 638 aaPredicted RBP11.57□□□□□ -0.56
PHACTR4-204ENST00000493669 H3BQF6 201 aa11.57□□□□□ -0.56
PHACTR4-204ENST00000493669 TULP1O00294 542 aaPredicted RBP11.57□□□□□ -0.56
PHACTR4-204ENST00000493669 GLI1P08151 1106 aa11.57□□□□□ -0.56
PHACTR4-204ENST00000493669 SRGAP2CP0DJJ0 459 aa11.57□□□□□ -0.56
PHACTR4-204ENST00000493669 PTENP60484 403 aa11.57□□□□□ -0.56
PHACTR4-204ENST00000493669 CUL1Q13616 776 aa11.57□□□□□ -0.56
PHACTR4-204ENST00000493669 CCL15Q16663 113 aa11.57□□□□□ -0.56
PHACTR4-204ENST00000493669 ZBTB41Q5SVQ8 909 aa11.57□□□□□ -0.56
PHACTR4-204ENST00000493669 LMBRD2Q68DH5 695 aaPredicted RBP11.57□□□□□ -0.56
PHACTR4-204ENST00000493669 MAMDC4Q6UXC1 1216 aa11.57□□□□□ -0.56
PHACTR4-204ENST00000493669 MAATS1Q7Z4T9 603 aa11.57□□□□□ -0.56
PHACTR4-204ENST00000493669 IFNLR1Q8IU57 520 aaPredicted RBP11.57□□□□□ -0.56
PHACTR4-204ENST00000493669 LRRC71Q8N4P6 559 aa11.57□□□□□ -0.56
PHACTR4-204ENST00000493669 COPS5Q92905 334 aa11.57□□□□□ -0.56
PHACTR4-204ENST00000493669 ZSWIM1Q9BR11 485 aa11.57□□□□□ -0.56
PHACTR4-204ENST00000493669 TCHPQ9BT92 498 aa11.57□□□□□ -0.56
PHACTR4-204ENST00000493669 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.57□□□□□ -0.561e-6■■■■■ 73.7
PHACTR4-204ENST00000493669 PDGFCQ9NRA1 345 aa11.57□□□□□ -0.56
PHACTR4-204ENST00000493669 CPSF3Q9UKF6 684 aaKnown RBP11.57□□□□□ -0.56
PHACTR4-204ENST00000493669 GOLGA6L10A0A0M3HER8 536 aa11.56□□□□□ -0.56
PHACTR4-204ENST00000493669 RAD51CO43502 376 aa11.56□□□□□ -0.56
PHACTR4-204ENST00000493669 PHACTR2O75167 634 aa11.56□□□□□ -0.56
PHACTR4-204ENST00000493669 C22orf31O95567 290 aa11.56□□□□□ -0.56
PHACTR4-204ENST00000493669 CTNNA2P26232 953 aa11.56□□□□□ -0.56
PHACTR4-204ENST00000493669 NOP14P78316 857 aaKnown RBP11.56□□□□□ -0.56
PHACTR4-204ENST00000493669 GUCY2DQ02846 1103 aa11.56□□□□□ -0.56
PHACTR4-204ENST00000493669 NCOA4Q13772 614 aa11.56□□□□□ -0.56
PHACTR4-204ENST00000493669 FAM187BQ17R55 369 aa11.56□□□□□ -0.56
PHACTR4-204ENST00000493669 WHAMMQ8TF30 809 aa11.56□□□□□ -0.56
PHACTR4-204ENST00000493669 RNPC3Q96LT9 517 aaKnown RBP11.56□□□□□ -0.56
PHACTR4-204ENST00000493669 NUP85Q9BW27 656 aa11.56□□□□□ -0.56
PHACTR4-204ENST00000493669 EPB41L5Q9HCM4 733 aa11.56□□□□□ -0.56
PHACTR4-204ENST00000493669 PTPRHQ9HD43 1115 aa11.56□□□□□ -0.56
PHACTR4-204ENST00000493669 CLEC11AQ9Y240 323 aa11.56□□□□□ -0.56
PHACTR4-204ENST00000493669 ZSWIM8A7E2V4 1837 aa11.56□□□□□ -0.56
PHACTR4-204ENST00000493669 CCDC66A2RUB6 948 aa11.56□□□□□ -0.56
PHACTR4-204ENST00000493669 CYP1A1P04798 512 aaPredicted RBP11.56□□□□□ -0.56
PHACTR4-204ENST00000493669 POTEJP0CG39 1038 aa11.56□□□□□ -0.56
PHACTR4-204ENST00000493669 CENPCQ03188 943 aa11.56□□□□□ -0.56
PHACTR4-204ENST00000493669 DMTNQ08495 405 aa11.56□□□□□ -0.56
PHACTR4-204ENST00000493669 GPR162Q16538 588 aa11.56□□□□□ -0.56
PHACTR4-204ENST00000493669 EFCAB12Q6NXP0 572 aa11.56□□□□□ -0.56
PHACTR4-204ENST00000493669 SND1Q7KZF4 910 aaKnown RBP eCLIP11.56□□□□□ -0.56
PHACTR4-204ENST00000493669 RHPN2Q8IUC4 686 aa11.56□□□□□ -0.56
PHACTR4-204ENST00000493669 KLHL7Q8IXQ5 586 aa11.56□□□□□ -0.56
PHACTR4-204ENST00000493669 GSPT2Q8IYD1 628 aaKnown RBP11.56□□□□□ -0.56
PHACTR4-204ENST00000493669 MREGQ8N565 214 aa11.56□□□□□ -0.56
PHACTR4-204ENST00000493669 VCPIP1Q96JH7 1222 aa11.56□□□□□ -0.56
PHACTR4-204ENST00000493669 APOBEC3GQ9HC16 384 aaKnown RBP11.56□□□□□ -0.56
PHACTR4-204ENST00000493669 ACP6Q9NPH0 428 aa11.56□□□□□ -0.56
PHACTR4-204ENST00000493669 PRMT7Q9NVM4 692 aaPredicted RBP11.56□□□□□ -0.56
PHACTR4-204ENST00000493669 TNFSF13BQ9Y275 285 aa11.56□□□□□ -0.56
PHACTR4-204ENST00000493669 SART1O43290 800 aaKnown RBP11.56□□□□□ -0.56
PHACTR4-204ENST00000493669 ASS1P00966 412 aaKnown RBP11.56□□□□□ -0.56
PHACTR4-204ENST00000493669 LGALS2P05162 132 aa11.56□□□□□ -0.56
PHACTR4-204ENST00000493669 PHKA2P46019 1235 aa11.56□□□□□ -0.56
PHACTR4-204ENST00000493669 RNASE9P60153 205 aaKnown RBP11.56□□□□□ -0.56
PHACTR4-204ENST00000493669 DUOXA2Q1HG44 320 aa11.56□□□□□ -0.56
PHACTR4-204ENST00000493669 ATF7IP2Q5U623 682 aa11.56□□□□□ -0.56
PHACTR4-204ENST00000493669 DCAF12L1Q5VU92 463 aa11.56□□□□□ -0.56
PHACTR4-204ENST00000493669 ALS2CLQ60I27 953 aa11.56□□□□□ -0.56
PHACTR4-204ENST00000493669 OR5B17Q8NGF7 314 aa11.56□□□□□ -0.56
PHACTR4-204ENST00000493669 BRI3BPQ8WY22 251 aa11.56□□□□□ -0.56
PHACTR4-204ENST00000493669 CD101Q93033 1021 aa11.56□□□□□ -0.56
PHACTR4-204ENST00000493669 CCDC102AQ96A19 550 aa11.56□□□□□ -0.56
PHACTR4-204ENST00000493669 FAXDC2Q96IV6 333 aa11.56□□□□□ -0.56
PHACTR4-204ENST00000493669 PARK7Q99497 189 aaKnown RBP11.56□□□□□ -0.56
PHACTR4-204ENST00000493669 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.56□□□□□ -0.56
PHACTR4-204ENST00000493669 CNOT8Q9UFF9 292 aaKnown RBP11.56□□□□□ -0.56
PHACTR4-204ENST00000493669 IL18RAPO95256 599 aa11.55□□□□□ -0.56
PHACTR4-204ENST00000493669 FGGP02679 453 aa11.55□□□□□ -0.56
PHACTR4-204ENST00000493669 CTNNA1P35221 906 aaKnown RBP11.55□□□□□ -0.56
PHACTR4-204ENST00000493669 MCOLN2Q8IZK6 566 aa11.55□□□□□ -0.56
PHACTR4-204ENST00000493669 LINC01465Q8N7H1 131 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms