RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 GIN1Q9NXP7 522 aa7.27□□□□□ -1.25
VPS13B-205ENST00000493587 DBR1Q9UK59 544 aaKnown RBP7.27□□□□□ -1.25
VPS13B-205ENST00000493587 ATP11BQ9Y2G3 1177 aa7.27□□□□□ -1.25
VPS13B-205ENST00000493587 CCNB1P14635 433 aa7.26□□□□□ -1.25
VPS13B-205ENST00000493587 RPL5P46777 297 aaKnown RBP7.26□□□□□ -1.25
VPS13B-205ENST00000493587 ENTPD1P49961 510 aa7.26□□□□□ -1.25
VPS13B-205ENST00000493587 MORC3Q14149 939 aa7.26□□□□□ -1.25
VPS13B-205ENST00000493587 TAF12Q16514 161 aa7.26□□□□□ -1.25
VPS13B-205ENST00000493587 NLRP10Q86W26 655 aa7.26□□□□□ -1.25
VPS13B-205ENST00000493587 C2CD5Q86YS7 1000 aa7.26□□□□□ -1.25
VPS13B-205ENST00000493587 ENAHQ8N8S7 591 aaPredicted RBP7.26□□□□□ -1.25
VPS13B-205ENST00000493587 PLEKHO2Q8TD55 490 aa7.26□□□□□ -1.25
VPS13B-205ENST00000493587 GLMNQ92990 594 aa7.26□□□□□ -1.25
VPS13B-205ENST00000493587 FAM161BQ96MY7 647 aa7.26□□□□□ -1.25
VPS13B-205ENST00000493587 AIFM3Q96NN9 605 aa7.26□□□□□ -1.25
VPS13B-205ENST00000493587 HGH1Q9BTY7 390 aa7.26□□□□□ -1.25
VPS13B-205ENST00000493587 ZMYND12Q9H0C1 365 aa7.26□□□□□ -1.25
VPS13B-205ENST00000493587 RNF14Q9UBS8 474 aa7.26□□□□□ -1.25
VPS13B-205ENST00000493587 ZNF212Q9UDV6 495 aa7.26□□□□□ -1.25
VPS13B-205ENST00000493587 PCDHA13Q9Y5I0 950 aa7.26□□□□□ -1.25
VPS13B-205ENST00000493587 SNED1Q8TER0 1413 aa7.26□□□□□ -1.25
VPS13B-205ENST00000493587 H0YGN5 161 aa7.26□□□□□ -1.25
VPS13B-205ENST00000493587 CTDNEP1O95476 244 aa7.26□□□□□ -1.25
VPS13B-205ENST00000493587 PCCAP05165 728 aaPredicted RBP7.26□□□□□ -1.25
VPS13B-205ENST00000493587 PPARGP37231 505 aaPredicted RBP7.26□□□□□ -1.25
VPS13B-205ENST00000493587 VPS72Q15906 364 aa7.26□□□□□ -1.25
VPS13B-205ENST00000493587 ACSBG2Q5FVE4 666 aa7.26□□□□□ -1.25
VPS13B-205ENST00000493587 FYB2Q5VWT5 728 aa7.26□□□□□ -1.25
VPS13B-205ENST00000493587 ZCCHC8Q6NZY4 707 aaKnown RBP7.26□□□□□ -1.25
VPS13B-205ENST00000493587 TUBA3EQ6PEY2 450 aa7.26□□□□□ -1.25
VPS13B-205ENST00000493587 C4orf50Q6ZRC1 276 aa7.26□□□□□ -1.25
VPS13B-205ENST00000493587 CYP4V2Q6ZWL3 525 aaPredicted RBP7.26□□□□□ -1.25
VPS13B-205ENST00000493587 ECHDC2Q86YB7 292 aa7.26□□□□□ -1.25
VPS13B-205ENST00000493587 KBTBD2Q8IY47 623 aa7.26□□□□□ -1.25
VPS13B-205ENST00000493587 SYNE4Q8N205 404 aa7.26□□□□□ -1.25
VPS13B-205ENST00000493587 INPP5DQ92835 1189 aa7.26□□□□□ -1.25
VPS13B-205ENST00000493587 HPS1Q92902 700 aa7.26□□□□□ -1.25
VPS13B-205ENST00000493587 MRPL9Q9BYD2 267 aaKnown RBP7.26□□□□□ -1.25
VPS13B-205ENST00000493587 RSPH9Q9H1X1 276 aaPredicted RBP7.26□□□□□ -1.25
VPS13B-205ENST00000493587 ZFP69BQ9UJL9 534 aa7.26□□□□□ -1.25
VPS13B-205ENST00000493587 NFS1Q9Y697 457 aa7.26□□□□□ -1.25
VPS13B-205ENST00000493587 UMODL1Q5DID0 1318 aa7.26□□□□□ -1.25
VPS13B-205ENST00000493587 MAP3K15Q6ZN16 1313 aa7.26□□□□□ -1.25
VPS13B-205ENST00000493587 SNTNA6NMZ2 147 aa7.26□□□□□ -1.25
VPS13B-205ENST00000493587 TMEM114B3SHH9 223 aa7.26□□□□□ -1.25
VPS13B-205ENST00000493587 RASGRF2O14827 1237 aa7.26□□□□□ -1.25
VPS13B-205ENST00000493587 KCNQ2O43526 872 aa7.26□□□□□ -1.25
VPS13B-205ENST00000493587 GUCY1B2O75343 617 aa7.26□□□□□ -1.25
VPS13B-205ENST00000493587 CES1P23141 567 aa7.26□□□□□ -1.25
VPS13B-205ENST00000493587 ANXA13P27216 316 aa7.26□□□□□ -1.25
VPS13B-205ENST00000493587 PBX1P40424 430 aa7.26□□□□□ -1.25
VPS13B-205ENST00000493587 CLK3P49761 638 aaKnown RBP7.26□□□□□ -1.25
VPS13B-205ENST00000493587 EMP3P54852 163 aa7.26□□□□□ -1.25
VPS13B-205ENST00000493587 MDM2Q00987 491 aaPredicted RBP7.26□□□□□ -1.25
VPS13B-205ENST00000493587 ASPHQ12797 758 aa7.26□□□□□ -1.25
VPS13B-205ENST00000493587 TCIRG1Q13488 830 aa7.26□□□□□ -1.25
VPS13B-205ENST00000493587 KRT81Q14533 505 aa7.26□□□□□ -1.25
VPS13B-205ENST00000493587 SMU1Q2TAY7 513 aa7.26□□□□□ -1.25
VPS13B-205ENST00000493587 GRAMD1BQ3KR37 738 aa7.26□□□□□ -1.25
VPS13B-205ENST00000493587 NEK5Q6P3R8 708 aa7.26□□□□□ -1.25
VPS13B-205ENST00000493587 UTS2BQ765I0 119 aa7.26□□□□□ -1.25
VPS13B-205ENST00000493587 NOSTRINQ8IVI9 506 aa7.26□□□□□ -1.25
VPS13B-205ENST00000493587 OR7G1Q8NGA0 311 aa7.26□□□□□ -1.25
VPS13B-205ENST00000493587 EEF2KMTQ96G04 330 aa7.26□□□□□ -1.25
VPS13B-205ENST00000493587 CDCA7Q9BWT1 371 aaPredicted RBP7.26□□□□□ -1.25
VPS13B-205ENST00000493587 EBF3Q9H4W6 596 aa7.26□□□□□ -1.25
VPS13B-205ENST00000493587 SIAEQ9HAT2 523 aa7.26□□□□□ -1.25
VPS13B-205ENST00000493587 USP29Q9HBJ7 922 aa7.26□□□□□ -1.25
VPS13B-205ENST00000493587 GIMAP4Q9NUV9 329 aa7.26□□□□□ -1.25
VPS13B-205ENST00000493587 TBK1Q9UHD2 729 aa7.26□□□□□ -1.25
VPS13B-205ENST00000493587 MYH7BA7E2Y1 1941 aa7.26□□□□□ -1.25
VPS13B-205ENST00000493587 A0A087WZG4 1122 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 A0A0G2JLW4 131 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 A0A1W2PRG0 241 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 TMEM120BA0PK00 339 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 TSPAN1O60635 241 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 TOM1O60784 492 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 CRYZL1O95825 349 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 PRLRP16471 622 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 PTPN4P29074 926 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 S100A5P33763 92 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 PRCPP42785 496 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 MMP13P45452 471 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 STT3AP46977 705 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 HSD17B4P51659 736 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 GRIN1Q05586 938 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 TFCP2Q12800 502 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 WASHC4Q2M389 1173 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 TRIM16LQ309B1 348 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 CEP78Q5JTW2 689 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 GJC2Q5T442 439 aaPredicted RBP7.25□□□□□ -1.25
VPS13B-205ENST00000493587 SYCP2LQ5T4T6 812 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 ADSSL1Q8N142 457 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 PYROXD1Q8WU10 500 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 ITPKCQ96DU7 683 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 OMA1Q96E52 524 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 CCDC8Q9H0W5 538 aaPredicted RBP7.25□□□□□ -1.25
VPS13B-205ENST00000493587 ZBTB3Q9H5J0 574 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 PCDH12Q9NPG4 1184 aa7.25□□□□□ -1.25
VPS13B-205ENST00000493587 ANLNQ9NQW6 1124 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms