RNA–Protein interactions for RNA: ENST00000493378.1

ARF4-207, Transcript of ADP ribosylation factor 4, humanhuman

TSL 3

Gene ARF4, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF4-207ENST00000493378 IGSF21Q96ID5 467 aa11.72□□□□□ -0.53
ARF4-207ENST00000493378 ZMAT2Q96NC0 199 aaKnown RBP11.72□□□□□ -0.53
ARF4-207ENST00000493378 GUCD1Q96NT3 240 aa11.72□□□□□ -0.53
ARF4-207ENST00000493378 FAM213AQ9BRX8 229 aa11.72□□□□□ -0.53
ARF4-207ENST00000493378 RBAKQ9NYW8 714 aaPredicted RBP11.72□□□□□ -0.53
ARF4-207ENST00000493378 DNAJB4Q9UDY4 337 aa11.72□□□□□ -0.53
ARF4-207ENST00000493378 FAN1Q9Y2M0 1017 aa11.72□□□□□ -0.53
ARF4-207ENST00000493378 COL4A4P53420 1690 aaPredicted RBP11.71□□□□□ -0.53
ARF4-207ENST00000493378 LACTBL1A8MY62 500 aa11.71□□□□□ -0.53
ARF4-207ENST00000493378 NRP1O14786 923 aa11.71□□□□□ -0.53
ARF4-207ENST00000493378 NR3C1P04150 777 aa11.71□□□□□ -0.53
ARF4-207ENST00000493378 ITGB1P05556 798 aa11.71□□□□□ -0.53
ARF4-207ENST00000493378 BMP6P22004 513 aa11.71□□□□□ -0.53
ARF4-207ENST00000493378 MCCD1P59942 119 aaPredicted RBP11.71□□□□□ -0.53
ARF4-207ENST00000493378 SNRNP35Q16560 246 aaKnown RBP11.71□□□□□ -0.53
ARF4-207ENST00000493378 CAMK4Q16566 473 aa11.71□□□□□ -0.53
ARF4-207ENST00000493378 UPP1Q16831 310 aa11.71□□□□□ -0.53
ARF4-207ENST00000493378 CT47A1Q5JQC4 288 aaPredicted RBP11.71□□□□□ -0.53
ARF4-207ENST00000493378 GLRA4Q5JXX5 417 aa11.71□□□□□ -0.53
ARF4-207ENST00000493378 Q7L0L9 218 aa11.71□□□□□ -0.53
ARF4-207ENST00000493378 DDX53Q86TM3 631 aaKnown RBP11.71□□□□□ -0.53
ARF4-207ENST00000493378 GPR65Q8IYL9 337 aa11.71□□□□□ -0.53
ARF4-207ENST00000493378 SMYD4Q8IYR2 804 aaPredicted RBP11.71□□□□□ -0.53
ARF4-207ENST00000493378 RNF168Q8IYW5 571 aaPredicted RBP11.71□□□□□ -0.53
ARF4-207ENST00000493378 SPPL3Q8TCT6 385 aa11.71□□□□□ -0.53
ARF4-207ENST00000493378 GDPD5Q8WTR4 605 aa11.71□□□□□ -0.53
ARF4-207ENST00000493378 MRPL38Q96DV4 380 aaKnown RBP11.71□□□□□ -0.53
ARF4-207ENST00000493378 TMEM169Q96HH4 297 aa11.71□□□□□ -0.53
ARF4-207ENST00000493378 GAS2L1Q99501 681 aaPredicted RBP11.71□□□□□ -0.53
ARF4-207ENST00000493378 CDX2Q99626 313 aaPredicted RBP11.71□□□□□ -0.53
ARF4-207ENST00000493378 MKNK1Q9BUB5 465 aa11.71□□□□□ -0.53
ARF4-207ENST00000493378 COLEC11Q9BWP8 271 aa11.71□□□□□ -0.53
ARF4-207ENST00000493378 CXCL16Q9H2A7 254 aa11.71□□□□□ -0.53
ARF4-207ENST00000493378 PRDM12Q9H4Q4 367 aa11.71□□□□□ -0.53
ARF4-207ENST00000493378 PCIF1Q9H4Z3 704 aa11.71□□□□□ -0.53
ARF4-207ENST00000493378 CERS4Q9HA82 394 aa11.71□□□□□ -0.53
ARF4-207ENST00000493378 MARCH5Q9NX47 278 aa11.71□□□□□ -0.53
ARF4-207ENST00000493378 PUF60Q9UHX1 559 aaKnown RBP11.71□□□□□ -0.53
ARF4-207ENST00000493378 MTUS1Q9ULD2 1270 aa11.71□□□□□ -0.53
ARF4-207ENST00000493378 CITO14578 2027 aa11.7□□□□□ -0.54
ARF4-207ENST00000493378 PPP1R3GB7ZBB8 358 aa11.7□□□□□ -0.54
ARF4-207ENST00000493378 CLIC2O15247 247 aa11.7□□□□□ -0.54
ARF4-207ENST00000493378 EXOC3O60645 756 aa11.7□□□□□ -0.54
ARF4-207ENST00000493378 NR2F2P24468 414 aa11.7□□□□□ -0.54
ARF4-207ENST00000493378 CCNE1P24864 410 aa11.7□□□□□ -0.54
ARF4-207ENST00000493378 OR1G1P47890 313 aa11.7□□□□□ -0.54
ARF4-207ENST00000493378 CLDN10P78369 228 aa11.7□□□□□ -0.54
ARF4-207ENST00000493378 TMEM132DQ14C87 1099 aa11.7□□□□□ -0.54
ARF4-207ENST00000493378 PSMD6Q15008 389 aa11.7□□□□□ -0.54
ARF4-207ENST00000493378 TIGD5Q53EQ6 642 aa11.7□□□□□ -0.54
ARF4-207ENST00000493378 CCDC183Q5T5S1 534 aa11.7□□□□□ -0.54
ARF4-207ENST00000493378 SPATA1Q5VX52 437 aa11.7□□□□□ -0.54
ARF4-207ENST00000493378 DCLRE1AQ6PJP8 1040 aa11.7□□□□□ -0.54
ARF4-207ENST00000493378 CBWD2Q8IUF1 395 aa11.7□□□□□ -0.54
ARF4-207ENST00000493378 WDR49Q8IV35 697 aa11.7□□□□□ -0.54
ARF4-207ENST00000493378 MLKLQ8NB16 471 aa11.7□□□□□ -0.54
ARF4-207ENST00000493378 BEST2Q8NFU1 509 aa11.7□□□□□ -0.54
ARF4-207ENST00000493378 POF1BQ8WVV4 589 aa11.7□□□□□ -0.54
ARF4-207ENST00000493378 KIF12Q96FN5 646 aa11.7□□□□□ -0.54
ARF4-207ENST00000493378 MFSD14AQ96MC6 490 aa11.7□□□□□ -0.54
ARF4-207ENST00000493378 TSG101Q99816 390 aa11.7□□□□□ -0.54
ARF4-207ENST00000493378 FRMD4BQ9Y2L6 1034 aa11.7□□□□□ -0.54
ARF4-207ENST00000493378 TDRD15B5MCY1 1934 aaKnown RBP11.7□□□□□ -0.54
ARF4-207ENST00000493378 PDCD11Q14690 1871 aaKnown RBP11.7□□□□□ -0.54
ARF4-207ENST00000493378 SF3B1O75533 1304 aaKnown RBP eCLIP11.69□□□□□ -0.54
ARF4-207ENST00000493378 BICDL2A1A5D9 508 aa11.69□□□□□ -0.54
ARF4-207ENST00000493378 FSD2A1L4K1 749 aa11.69□□□□□ -0.54
ARF4-207ENST00000493378 GOLGA8IPA6NC78 632 aa11.69□□□□□ -0.54
ARF4-207ENST00000493378 CASTOR2A6NHX0 329 aa11.69□□□□□ -0.54
ARF4-207ENST00000493378 GOLGA8JA6NMD2 632 aa11.69□□□□□ -0.54
ARF4-207ENST00000493378 PODXLO00592 558 aa11.69□□□□□ -0.54
ARF4-207ENST00000493378 FSCN2O14926 492 aa11.69□□□□□ -0.54
ARF4-207ENST00000493378 GRM6O15303 877 aa11.69□□□□□ -0.54
ARF4-207ENST00000493378 SLC16A3O15427 465 aaKnown RBP11.69□□□□□ -0.54
ARF4-207ENST00000493378 NFICP08651 508 aa11.69□□□□□ -0.54
ARF4-207ENST00000493378 PBX3P40426 434 aa11.69□□□□□ -0.54
ARF4-207ENST00000493378 CYP2J2P51589 502 aa11.69□□□□□ -0.54
ARF4-207ENST00000493378 CLCNKBP51801 687 aa11.69□□□□□ -0.54
ARF4-207ENST00000493378 AP3M2P53677 418 aa11.69□□□□□ -0.54
ARF4-207ENST00000493378 FKBP3Q00688 224 aaKnown RBP11.69□□□□□ -0.54
ARF4-207ENST00000493378 SOX4Q06945 474 aaPredicted RBP11.69□□□□□ -0.54
ARF4-207ENST00000493378 CYP24A1Q07973 514 aa11.69□□□□□ -0.54
ARF4-207ENST00000493378 ELAVL2Q12926 359 aaKnown RBP11.69□□□□□ -0.54
ARF4-207ENST00000493378 ADGRE1Q14246 886 aa11.69□□□□□ -0.54
ARF4-207ENST00000493378 KLHL40Q2TBA0 621 aa11.69□□□□□ -0.54
ARF4-207ENST00000493378 JADE1Q6IE81 842 aa11.69□□□□□ -0.54
ARF4-207ENST00000493378 INTS8Q75QN2 995 aaKnown RBP11.69□□□□□ -0.54
ARF4-207ENST00000493378 USP37Q86T82 979 aa11.69□□□□□ -0.54
ARF4-207ENST00000493378 TMEM173Q86WV6 379 aaPredicted RBP11.69□□□□□ -0.54
ARF4-207ENST00000493378 EFCAB13Q8IY85 973 aa11.69□□□□□ -0.54
ARF4-207ENST00000493378 ZSWIM2Q8NEG5 633 aa11.69□□□□□ -0.54
ARF4-207ENST00000493378 CACTINQ8WUQ7 758 aaKnown RBP11.69□□□□□ -0.54
ARF4-207ENST00000493378 BCL7CQ8WUZ0 217 aaPredicted RBP11.69□□□□□ -0.54
ARF4-207ENST00000493378 SYAP1Q96A49 352 aaPredicted RBP11.69□□□□□ -0.54
ARF4-207ENST00000493378 FAM161BQ96MY7 647 aa11.69□□□□□ -0.54
ARF4-207ENST00000493378 HERC2P3Q9BVR0 1158 aa11.69□□□□□ -0.54
ARF4-207ENST00000493378 NGRNQ9NPE2 291 aaKnown RBP11.69□□□□□ -0.54
ARF4-207ENST00000493378 TLR9Q9NR96 1032 aa11.69□□□□□ -0.54
ARF4-207ENST00000493378 TUBGCP4Q9UGJ1 667 aa11.69□□□□□ -0.54
ARF4-207ENST00000493378 DACH1Q9UI36 760 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms