RNA–Protein interactions for RNA: ENST00000493356.5

PFDN4-205, Transcript of prefoldin subunit 4, humanhuman

TSL 3

Gene PFDN4, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-205ENST00000493356 B3GAT3O94766 335 aa23.65■■□□□ 1.38
PFDN4-205ENST00000493356 LIG1P18858 919 aa23.65■■□□□ 1.38
PFDN4-205ENST00000493356 NAMPTP43490 491 aa23.65■■□□□ 1.38
PFDN4-205ENST00000493356 GLRA4Q5JXX5 417 aa23.65■■□□□ 1.38
PFDN4-205ENST00000493356 VARS2Q5ST30 1063 aaKnown RBP23.65■■□□□ 1.38
PFDN4-205ENST00000493356 ZBTB41Q5SVQ8 909 aa23.65■■□□□ 1.38
PFDN4-205ENST00000493356 TPRG1Q6ZUI0 275 aa23.65■■□□□ 1.38
PFDN4-205ENST00000493356 NECAB1Q8N987 351 aa23.65■■□□□ 1.38
PFDN4-205ENST00000493356 CLDN23Q96B33 292 aa23.65■■□□□ 1.38
PFDN4-205ENST00000493356 PPP1R10Q96QC0 940 aaKnown RBP23.65■■□□□ 1.38
PFDN4-205ENST00000493356 NACC1Q96RE7 527 aa23.65■■□□□ 1.38
PFDN4-205ENST00000493356 NCDNQ9UBB6 729 aa23.65■■□□□ 1.38
PFDN4-205ENST00000493356 BACE2Q9Y5Z0 518 aa23.65■■□□□ 1.38
PFDN4-205ENST00000493356 EPG5Q9HCE0 2579 aa23.64■■□□□ 1.38
PFDN4-205ENST00000493356 SPTBN2O15020 2390 aa23.64■■□□□ 1.38
PFDN4-205ENST00000493356 ECI2O75521 394 aa23.64■■□□□ 1.37
PFDN4-205ENST00000493356 CYP11B2P19099 503 aa23.64■■□□□ 1.37
PFDN4-205ENST00000493356 TARSP26639 723 aaKnown RBP23.64■■□□□ 1.37
PFDN4-205ENST00000493356 TKTP29401 623 aaKnown RBP23.64■■□□□ 1.37
PFDN4-205ENST00000493356 CLCNKBP51801 687 aa23.64■■□□□ 1.37
PFDN4-205ENST00000493356 RSPO4Q2I0M5 234 aaPredicted RBP23.64■■□□□ 1.37
PFDN4-205ENST00000493356 SLC5A9Q2M3M2 681 aa23.64■■□□□ 1.37
PFDN4-205ENST00000493356 DCAF4L1Q3SXM0 396 aa23.64■■□□□ 1.37
PFDN4-205ENST00000493356 PADI6Q6TGC4 694 aa23.64■■□□□ 1.37
PFDN4-205ENST00000493356 CD300LGQ6UXG3 332 aa23.64■■□□□ 1.37
PFDN4-205ENST00000493356 ZBTB44Q8NCP5 570 aa23.64■■□□□ 1.37
PFDN4-205ENST00000493356 DEPTORQ8TB45 409 aa23.64■■□□□ 1.37
PFDN4-205ENST00000493356 ATRIPQ8WXE1 791 aa23.64■■□□□ 1.37
PFDN4-205ENST00000493356 MCRS1Q96EZ8 462 aa23.64■■□□□ 1.37
PFDN4-205ENST00000493356 DDX27Q96GQ7 796 aaKnown RBP23.64■■□□□ 1.37
PFDN4-205ENST00000493356 NELL2Q99435 816 aa23.64■■□□□ 1.37
PFDN4-205ENST00000493356 POLR3CQ9BUI4 534 aaPredicted RBP23.64■■□□□ 1.37
PFDN4-205ENST00000493356 PLA2G2FQ9BZM2 168 aa23.64■■□□□ 1.37
PFDN4-205ENST00000493356 GDE1Q9NZC3 331 aa23.64■■□□□ 1.37
PFDN4-205ENST00000493356 RHOP08100 348 aa23.63■■□□□ 1.37
PFDN4-205ENST00000493356 ANKRD1Q15327 319 aa23.63■■□□□ 1.37
PFDN4-205ENST00000493356 UPP1Q16831 310 aa23.63■■□□□ 1.37
PFDN4-205ENST00000493356 POTEHQ6S545 545 aa23.63■■□□□ 1.37
PFDN4-205ENST00000493356 ANKS3Q6ZW76 656 aa23.63■■□□□ 1.37
PFDN4-205ENST00000493356 C3orf58Q8NDZ4 430 aa23.63■■□□□ 1.37
PFDN4-205ENST00000493356 NELL1Q92832 810 aa23.63■■□□□ 1.37
PFDN4-205ENST00000493356 AVENQ9NQS1 362 aaPredicted RBP23.63■■□□□ 1.37
PFDN4-205ENST00000493356 ZSCAN32Q9NX65 697 aa23.63■■□□□ 1.37
PFDN4-205ENST00000493356 TPRP12270 2363 aaKnown RBP23.62■■□□□ 1.37
PFDN4-205ENST00000493356 ARHGEF35A5YM69 484 aa23.62■■□□□ 1.37
PFDN4-205ENST00000493356 I3L4J1 428 aa23.62■■□□□ 1.37
PFDN4-205ENST00000493356 LARGE1O95461 756 aa23.62■■□□□ 1.37
PFDN4-205ENST00000493356 RPS9P46781 194 aaKnown RBP23.62■■□□□ 1.37
PFDN4-205ENST00000493356 FOSBP53539 338 aa23.62■■□□□ 1.37
PFDN4-205ENST00000493356 ME3Q16798 604 aa23.62■■□□□ 1.37
PFDN4-205ENST00000493356 NSUN7Q8NE18 718 aaKnown RBP23.62■■□□□ 1.37
PFDN4-205ENST00000493356 GTF3C6Q969F1 213 aa23.62■■□□□ 1.37
PFDN4-205ENST00000493356 UROC1Q96N76 676 aa23.62■■□□□ 1.37
PFDN4-205ENST00000493356 KIFC3Q9BVG8 833 aa23.62■■□□□ 1.37
PFDN4-205ENST00000493356 GOLGA2P5Q9HBQ8 144 aa23.62■■□□□ 1.37
PFDN4-205ENST00000493356 HEBP1Q9NRV9 189 aa23.62■■□□□ 1.37
PFDN4-205ENST00000493356 CACNA1BQ00975 2339 aa23.61■■□□□ 1.37
PFDN4-205ENST00000493356 SHISA7A6NL88 538 aa23.61■■□□□ 1.37
PFDN4-205ENST00000493356 NCAM2O15394 837 aa23.61■■□□□ 1.37
PFDN4-205ENST00000493356 TRAPPC3O43617 180 aa23.61■■□□□ 1.37
PFDN4-205ENST00000493356 LILRB5O75023 590 aa23.61■■□□□ 1.37
PFDN4-205ENST00000493356 RPA1P27694 616 aa23.61■■□□□ 1.37
PFDN4-205ENST00000493356 MCM7P33993 719 aa23.61■■□□□ 1.37
PFDN4-205ENST00000493356 BRCC3P46736 316 aa23.61■■□□□ 1.37
PFDN4-205ENST00000493356 PPP2R5AQ15172 486 aa23.61■■□□□ 1.37
PFDN4-205ENST00000493356 NT5DC1Q5TFE4 455 aa23.61■■□□□ 1.37
PFDN4-205ENST00000493356 ZNF852Q6ZMS4 543 aa23.61■■□□□ 1.37
PFDN4-205ENST00000493356 EPC1Q9H2F5 836 aa23.61■■□□□ 1.37
PFDN4-205ENST00000493356 DAXXQ9UER7 740 aaPredicted RBP23.61■■□□□ 1.37
PFDN4-205ENST00000493356 SMG5Q9UPR3 1016 aaKnown RBP23.61■■□□□ 1.37
PFDN4-205ENST00000493356 F5P12259 2224 aa23.61■■□□□ 1.37
PFDN4-205ENST00000493356 ARHGEF37A1IGU5 675 aa23.6■■□□□ 1.37
PFDN4-205ENST00000493356 CEBPBP17676 345 aa23.6■■□□□ 1.37
PFDN4-205ENST00000493356 EFNA5P52803 228 aa23.6■■□□□ 1.37
PFDN4-205ENST00000493356 ROR1Q01973 937 aa23.6■■□□□ 1.37
PFDN4-205ENST00000493356 FZD5Q13467 585 aa23.6■■□□□ 1.37
PFDN4-205ENST00000493356 TRIM29Q14134 588 aa23.6■■□□□ 1.37
PFDN4-205ENST00000493356 ATF7IP2Q5U623 682 aa23.6■■□□□ 1.37
PFDN4-205ENST00000493356 TANGO2Q6ICL3 276 aa23.6■■□□□ 1.37
PFDN4-205ENST00000493356 TSSK4Q6SA08 328 aa23.6■■□□□ 1.37
PFDN4-205ENST00000493356 GPR161Q8N6U8 529 aaKnown RBP23.6■■□□□ 1.37
PFDN4-205ENST00000493356 ZNF461Q8TAF7 563 aa23.6■■□□□ 1.37
PFDN4-205ENST00000493356 ELSPBP1Q96BH3 223 aa23.6■■□□□ 1.37
PFDN4-205ENST00000493356 PRMT8Q9NR22 394 aaPredicted RBP23.6■■□□□ 1.37
PFDN4-205ENST00000493356 MRPS17Q9Y2R5 130 aaKnown RBP23.6■■□□□ 1.37
PFDN4-205ENST00000493356 JAK2O60674 1132 aa23.59■■□□□ 1.37
PFDN4-205ENST00000493356 PTPN2P17706 415 aa23.59■■□□□ 1.37
PFDN4-205ENST00000493356 ADCY1Q08828 1119 aa23.59■■□□□ 1.37
PFDN4-205ENST00000493356 SLC8B1Q6J4K2 584 aa23.59■■□□□ 1.37
PFDN4-205ENST00000493356 ERMNQ8TAM6 284 aa23.59■■□□□ 1.37
PFDN4-205ENST00000493356 DNASE1L2Q92874 299 aa23.59■■□□□ 1.37
PFDN4-205ENST00000493356 POLD4Q9HCU8 107 aa23.59■■□□□ 1.37
PFDN4-205ENST00000493356 SMIM28A0A1B0GU29 152 aa23.58■■□□□ 1.37
PFDN4-205ENST00000493356 WDR27A2RRH5 827 aa23.58■■□□□ 1.37
PFDN4-205ENST00000493356 ABLIM3O94929 683 aa23.58■■□□□ 1.37
PFDN4-205ENST00000493356 LRG1P02750 347 aa23.58■■□□□ 1.37
PFDN4-205ENST00000493356 FCARP24071 287 aa23.58■■□□□ 1.37
PFDN4-205ENST00000493356 ANAPC15P60006 121 aa23.58■■□□□ 1.37
PFDN4-205ENST00000493356 SOX4Q06945 474 aaPredicted RBP23.58■■□□□ 1.37
PFDN4-205ENST00000493356 PRSS36Q5K4E3 855 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms