RNA–Protein interactions for RNA: ENST00000493341.1

VPS13A-212, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,001 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-212ENST00000493341 PPP1R14CQ8TAE6 165 aa5.47□□□□□ -1.53
VPS13A-212ENST00000493341 STON2Q8WXE9 905 aa5.47□□□□□ -1.53
VPS13A-212ENST00000493341 NMD3Q96D46 503 aaKnown RBP5.47□□□□□ -1.53
VPS13A-212ENST00000493341 SHISA4Q96DD7 197 aa5.47□□□□□ -1.53
VPS13A-212ENST00000493341 CYFIP2Q96F07 1278 aa5.47□□□□□ -1.53
VPS13A-212ENST00000493341 TSPAN17Q96FV3 270 aa5.47□□□□□ -1.53
VPS13A-212ENST00000493341 WDR92Q96MX6 357 aa5.47□□□□□ -1.53
VPS13A-212ENST00000493341 SLAMF7Q9NQ25 335 aa5.47□□□□□ -1.53
VPS13A-212ENST00000493341 TLR9Q9NR96 1032 aa5.47□□□□□ -1.53
VPS13A-212ENST00000493341 GGA3Q9NZ52 723 aa5.47□□□□□ -1.53
VPS13A-212ENST00000493341 SRRDQ9UH36 339 aa5.47□□□□□ -1.53
VPS13A-212ENST00000493341 HDAC9Q9UKV0 1011 aa5.47□□□□□ -1.53
VPS13A-212ENST00000493341 SETD1BQ9UPS6 1966 aaKnown RBP5.47□□□□□ -1.53
VPS13A-212ENST00000493341 IPO5O00410 1097 aaKnown RBP5.47□□□□□ -1.53
VPS13A-212ENST00000493341 BTN3A1O00481 513 aa5.47□□□□□ -1.53
VPS13A-212ENST00000493341 THAP12O43422 761 aa5.47□□□□□ -1.53
VPS13A-212ENST00000493341 MPOP05164 745 aa5.47□□□□□ -1.53
VPS13A-212ENST00000493341 FTH1P19P0C7X4 201 aa5.47□□□□□ -1.53
VPS13A-212ENST00000493341 SERPINF1P36955 418 aa5.47□□□□□ -1.53
VPS13A-212ENST00000493341 RASSF7Q02833 373 aa5.47□□□□□ -1.53
VPS13A-212ENST00000493341 CFAP161Q6P656 301 aa5.47□□□□□ -1.53
VPS13A-212ENST00000493341 ZNF783Q6ZMS7 281 aa5.47□□□□□ -1.53
VPS13A-212ENST00000493341 ZC3H18Q86VM9 953 aaKnown RBP5.47□□□□□ -1.53
VPS13A-212ENST00000493341 ESX1Q8N693 406 aa5.47□□□□□ -1.53
VPS13A-212ENST00000493341 CCDC120Q96HB5 630 aa5.47□□□□□ -1.53
VPS13A-212ENST00000493341 TRIM54Q9BYV2 358 aa5.47□□□□□ -1.53
VPS13A-212ENST00000493341 SENP6Q9GZR1 1112 aaPredicted RBP5.47□□□□□ -1.53
VPS13A-212ENST00000493341 ADAM7Q9H2U9 754 aa5.47□□□□□ -1.53
VPS13A-212ENST00000493341 SAE1Q9UBE0 346 aaPredicted RBP5.47□□□□□ -1.53
VPS13A-212ENST00000493341 STK17AQ9UEE5 414 aa5.47□□□□□ -1.53
VPS13A-212ENST00000493341 CCDC39Q9UFE4 941 aa5.47□□□□□ -1.53
VPS13A-212ENST00000493341 AJAP1Q9UKB5 411 aaPredicted RBP5.47□□□□□ -1.53
VPS13A-212ENST00000493341 NT5C1B-RDH14C9J2C7 533 aa5.46□□□□□ -1.54
VPS13A-212ENST00000493341 HNRNPDLO14979 420 aaKnown RBP5.46□□□□□ -1.54
VPS13A-212ENST00000493341 GPR32O75388 356 aa5.46□□□□□ -1.54
VPS13A-212ENST00000493341 FSBPO95073 299 aa5.46□□□□□ -1.54
VPS13A-212ENST00000493341 NDST3O95803 873 aa5.46□□□□□ -1.54
VPS13A-212ENST00000493341 IL18BPO95998 194 aa5.46□□□□□ -1.54
VPS13A-212ENST00000493341 CD4P01730 458 aa5.46□□□□□ -1.54
VPS13A-212ENST00000493341 MT-ND5P03915 603 aa5.46□□□□□ -1.54
VPS13A-212ENST00000493341 ANXA2P07355 339 aaKnown RBP5.46□□□□□ -1.54
VPS13A-212ENST00000493341 CKMT1AP12532 417 aa5.46□□□□□ -1.54
VPS13A-212ENST00000493341 SREBF1P36956 1147 aa5.46□□□□□ -1.54
VPS13A-212ENST00000493341 AFMP43652 599 aa5.46□□□□□ -1.54
VPS13A-212ENST00000493341 PHKA1P46020 1223 aa5.46□□□□□ -1.54
VPS13A-212ENST00000493341 RXRGP48443 463 aa5.46□□□□□ -1.54
VPS13A-212ENST00000493341 EIF5P55010 431 aaKnown RBP5.46□□□□□ -1.54
VPS13A-212ENST00000493341 MPP1Q00013 466 aa5.46□□□□□ -1.54
VPS13A-212ENST00000493341 PDE1CQ14123 709 aaPredicted RBP5.46□□□□□ -1.54
VPS13A-212ENST00000493341 MAN2A1Q16706 1144 aa5.46□□□□□ -1.54
VPS13A-212ENST00000493341 CCDC93Q567U6 631 aa5.46□□□□□ -1.54
VPS13A-212ENST00000493341 ADGRF1Q5T601 910 aa5.46□□□□□ -1.54
VPS13A-212ENST00000493341 ADGRG2Q8IZP9 1017 aa5.46□□□□□ -1.54
VPS13A-212ENST00000493341 STPG3Q8N7X2 389 aa5.46□□□□□ -1.54
VPS13A-212ENST00000493341 KBTBD7Q8WVZ9 684 aa5.46□□□□□ -1.54
VPS13A-212ENST00000493341 ASB12Q8WXK4 309 aa5.46□□□□□ -1.54
VPS13A-212ENST00000493341 MYLIPQ8WY64 445 aa5.46□□□□□ -1.54
VPS13A-212ENST00000493341 RUBCNQ92622 972 aa5.46□□□□□ -1.54
VPS13A-212ENST00000493341 ALG3Q92685 438 aa5.46□□□□□ -1.54
VPS13A-212ENST00000493341 BCO1Q9HAY6 547 aa5.46□□□□□ -1.54
VPS13A-212ENST00000493341 DLL4Q9NR61 685 aa5.46□□□□□ -1.54
VPS13A-212ENST00000493341 ZFP69BQ9UJL9 534 aa5.46□□□□□ -1.54
VPS13A-212ENST00000493341 A0A0U1RQG5 324 aaPredicted RBP5.45□□□□□ -1.54
VPS13A-212ENST00000493341 F2RL2O00254 374 aa5.45□□□□□ -1.54
VPS13A-212ENST00000493341 ADCY6O43306 1168 aa5.45□□□□□ -1.54
VPS13A-212ENST00000493341 TNFRSF6BO95407 300 aa5.45□□□□□ -1.54
VPS13A-212ENST00000493341 TGFB1P01137 390 aa5.45□□□□□ -1.54
VPS13A-212ENST00000493341 HPXP02790 462 aa5.45□□□□□ -1.54
VPS13A-212ENST00000493341 LORP23490 312 aaPredicted RBP5.45□□□□□ -1.54
VPS13A-212ENST00000493341 ARFIP2P53365 341 aa5.45□□□□□ -1.54
VPS13A-212ENST00000493341 INSM1Q01101 510 aaPredicted RBP5.45□□□□□ -1.54
VPS13A-212ENST00000493341 CREMQ03060 361 aa5.45□□□□□ -1.54
VPS13A-212ENST00000493341 STILQ15468 1287 aa5.45□□□□□ -1.54
VPS13A-212ENST00000493341 MSMPQ1L6U9 139 aa5.45□□□□□ -1.54
VPS13A-212ENST00000493341 WDR72Q3MJ13 1102 aa5.45□□□□□ -1.54
VPS13A-212ENST00000493341 UNC13DQ70J99 1090 aa5.45□□□□□ -1.54
VPS13A-212ENST00000493341 OR7D4Q8NG98 312 aa5.45□□□□□ -1.54
VPS13A-212ENST00000493341 IPO4Q8TEX9 1081 aaKnown RBP5.45□□□□□ -1.54
VPS13A-212ENST00000493341 MAML1Q92585 1016 aa5.45□□□□□ -1.54
VPS13A-212ENST00000493341 TBC1D23Q9NUY8 699 aa5.45□□□□□ -1.54
VPS13A-212ENST00000493341 CDC42EP3Q9UKI2 254 aa5.45□□□□□ -1.54
VPS13A-212ENST00000493341 RUVBL1Q9Y265 456 aaKnown RBP5.45□□□□□ -1.54
VPS13A-212ENST00000493341 FAM234BA2RU67 622 aa5.45□□□□□ -1.54
VPS13A-212ENST00000493341 SYT5O00445 386 aa5.45□□□□□ -1.54
VPS13A-212ENST00000493341 GAAP10253 952 aa5.45□□□□□ -1.54
VPS13A-212ENST00000493341 RAC2P15153 192 aa5.45□□□□□ -1.54
VPS13A-212ENST00000493341 FOXO1Q12778 655 aa5.45□□□□□ -1.54
VPS13A-212ENST00000493341 VPS53Q5VIR6 699 aa5.45□□□□□ -1.54
VPS13A-212ENST00000493341 ZC3H14Q6PJT7 736 aaKnown RBP5.45□□□□□ -1.54
VPS13A-212ENST00000493341 DPP8Q6V1X1 898 aaPredicted RBP5.45□□□□□ -1.54
VPS13A-212ENST00000493341 FAM90A1Q86YD7 464 aa5.45□□□□□ -1.54
VPS13A-212ENST00000493341 LILRA2Q8N149 483 aa5.45□□□□□ -1.54
VPS13A-212ENST00000493341 MPP5Q8N3R9 675 aa5.45□□□□□ -1.54
VPS13A-212ENST00000493341 DTX3Q8N9I9 347 aa5.45□□□□□ -1.54
VPS13A-212ENST00000493341 ZNF480Q8WV37 535 aa5.45□□□□□ -1.54
VPS13A-212ENST00000493341 UIMC1Q96RL1 719 aa5.45□□□□□ -1.54
VPS13A-212ENST00000493341 CNPPD1Q9BV87 410 aa5.45□□□□□ -1.54
VPS13A-212ENST00000493341 OSBPL6Q9BZF3 934 aa5.45□□□□□ -1.54
VPS13A-212ENST00000493341 OSBPL5Q9H0X9 879 aaPredicted RBP5.45□□□□□ -1.54
VPS13A-212ENST00000493341 JADE2Q9NQC1 790 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms