RNA–Protein interactions for RNA: ENST00000493271.1

SNRNP200-207, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 3

Gene SNRNP200, Length 585 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-207ENST00000493271 SNTG2Q9NY99 539 aa12.13□□□□□ -0.47
SNRNP200-207ENST00000493271 DNMT3BQ9UBC3 853 aaKnown RBP12.13□□□□□ -0.47
SNRNP200-207ENST00000493271 GMEB2Q9UKD1 530 aa12.13□□□□□ -0.47
SNRNP200-207ENST00000493271 CDV3Q9UKY7 258 aaKnown RBP12.13□□□□□ -0.47
SNRNP200-207ENST00000493271 CACNA1IQ9P0X4 2223 aa12.13□□□□□ -0.47
SNRNP200-207ENST00000493271 ARHGEF37A1IGU5 675 aa12.12□□□□□ -0.47
SNRNP200-207ENST00000493271 ZNF197O14709 1029 aa12.12□□□□□ -0.47
SNRNP200-207ENST00000493271 B3GAT3O94766 335 aa12.12□□□□□ -0.47
SNRNP200-207ENST00000493271 LRG1P02750 347 aa12.12□□□□□ -0.47
SNRNP200-207ENST00000493271 PRKCBP05771 671 aa12.12□□□□□ -0.47
SNRNP200-207ENST00000493271 PTPN2P17706 415 aa12.12□□□□□ -0.47
SNRNP200-207ENST00000493271 ELF1P32519 619 aa12.12□□□□□ -0.47
SNRNP200-207ENST00000493271 TXKP42681 527 aa12.12□□□□□ -0.47
SNRNP200-207ENST00000493271 ANKRD1Q15327 319 aa12.12□□□□□ -0.47
SNRNP200-207ENST00000493271 C1orf228Q6PIY5 440 aa12.12□□□□□ -0.47
SNRNP200-207ENST00000493271 ZNF461Q8TAF7 563 aa12.12□□□□□ -0.47
SNRNP200-207ENST00000493271 PIGOQ8TEQ8 1089 aa12.12□□□□□ -0.47
SNRNP200-207ENST00000493271 IRF7Q92985 503 aa12.12□□□□□ -0.47
SNRNP200-207ENST00000493271 TNFRSF25Q93038 417 aa12.12□□□□□ -0.47
SNRNP200-207ENST00000493271 MTMR9Q96QG7 549 aa12.12□□□□□ -0.47
SNRNP200-207ENST00000493271 TRPV5Q9NQA5 729 aa12.12□□□□□ -0.47
SNRNP200-207ENST00000493271 TOPORSQ9NS56 1045 aaPredicted RBP12.12□□□□□ -0.47
SNRNP200-207ENST00000493271 ORC3Q9UBD5 711 aaPredicted RBP12.12□□□□□ -0.47
SNRNP200-207ENST00000493271 RAB23Q9ULC3 237 aa12.12□□□□□ -0.47
SNRNP200-207ENST00000493271 MTF2Q9Y483 593 aaPredicted RBP12.12□□□□□ -0.47
SNRNP200-207ENST00000493271 CDY1Q9Y6F8 540 aa12.12□□□□□ -0.47
SNRNP200-207ENST00000493271 NCOR2Q9Y618 2525 aa12.12□□□□□ -0.47
SNRNP200-207ENST00000493271 PHLPP2Q6ZVD8 1323 aa12.11□□□□□ -0.47
SNRNP200-207ENST00000493271 ADAM12O43184 909 aa12.11□□□□□ -0.47
SNRNP200-207ENST00000493271 FOXD2O60548 495 aaPredicted RBP12.11□□□□□ -0.47
SNRNP200-207ENST00000493271 LRP3O75074 770 aa12.11□□□□□ -0.47
SNRNP200-207ENST00000493271 RHOP08100 348 aa12.11□□□□□ -0.47
SNRNP200-207ENST00000493271 MUTP22033 750 aa12.11□□□□□ -0.47
SNRNP200-207ENST00000493271 TARSP26639 723 aaKnown RBP12.11□□□□□ -0.47
SNRNP200-207ENST00000493271 ATXN1P54253 815 aaKnown RBP12.11□□□□□ -0.47
SNRNP200-207ENST00000493271 NR5A1Q13285 461 aa12.11□□□□□ -0.47
SNRNP200-207ENST00000493271 EARS2Q5JPH6 523 aaKnown RBP12.11□□□□□ -0.47
SNRNP200-207ENST00000493271 SLC8B1Q6J4K2 584 aa12.11□□□□□ -0.47
SNRNP200-207ENST00000493271 LEMD2Q8NC56 503 aa12.11□□□□□ -0.47
SNRNP200-207ENST00000493271 ERMNQ8TAM6 284 aa12.11□□□□□ -0.47
SNRNP200-207ENST00000493271 DEPTORQ8TB45 409 aa12.11□□□□□ -0.47
SNRNP200-207ENST00000493271 DDX27Q96GQ7 796 aaKnown RBP12.11□□□□□ -0.47
SNRNP200-207ENST00000493271 MSANTD3Q96H12 275 aa12.11□□□□□ -0.47
SNRNP200-207ENST00000493271 POLR3CQ9BUI4 534 aaPredicted RBP12.11□□□□□ -0.47
SNRNP200-207ENST00000493271 CCDC113Q9H0I3 377 aa12.11□□□□□ -0.47
SNRNP200-207ENST00000493271 GPRC5CQ9NQ84 441 aa12.11□□□□□ -0.47
SNRNP200-207ENST00000493271 SLC38A7Q9NVC3 462 aa12.11□□□□□ -0.47
SNRNP200-207ENST00000493271 CACNG4Q9UBN1 327 aa12.11□□□□□ -0.47
SNRNP200-207ENST00000493271 MAFFQ9ULX9 164 aa12.11□□□□□ -0.47
SNRNP200-207ENST00000493271 H7C4K7 107 aa12.1□□□□□ -0.47
SNRNP200-207ENST00000493271 SYN3O14994 580 aa12.1□□□□□ -0.47
SNRNP200-207ENST00000493271 ATF2P15336 505 aa12.1□□□□□ -0.47
SNRNP200-207ENST00000493271 CYP11B2P19099 503 aa12.1□□□□□ -0.47
SNRNP200-207ENST00000493271 CD72P21854 359 aa12.1□□□□□ -0.47
SNRNP200-207ENST00000493271 CCR3P51677 355 aa12.1□□□□□ -0.47
SNRNP200-207ENST00000493271 CLCNKBP51801 687 aa12.1□□□□□ -0.47
SNRNP200-207ENST00000493271 YARSP54577 528 aaKnown RBP12.1□□□□□ -0.47
SNRNP200-207ENST00000493271 MLLT6P55198 1093 aaPredicted RBP12.1□□□□□ -0.47
SNRNP200-207ENST00000493271 ORC2Q13416 577 aaPredicted RBP12.1□□□□□ -0.47
SNRNP200-207ENST00000493271 TRIM29Q14134 588 aa12.1□□□□□ -0.47
SNRNP200-207ENST00000493271 UPP1Q16831 310 aa12.1□□□□□ -0.47
SNRNP200-207ENST00000493271 TPGS2Q68CL5 300 aa12.1□□□□□ -0.47
SNRNP200-207ENST00000493271 MAEAQ7L5Y9 396 aa12.1□□□□□ -0.47
SNRNP200-207ENST00000493271 CATSPER3Q86XQ3 398 aa12.1□□□□□ -0.47
SNRNP200-207ENST00000493271 NOSTRINQ8IVI9 506 aa12.1□□□□□ -0.47
SNRNP200-207ENST00000493271 TCEAL8Q8IYN2 117 aa12.1□□□□□ -0.47
SNRNP200-207ENST00000493271 CELF5Q8N6W0 485 aaKnown RBP12.1□□□□□ -0.47
SNRNP200-207ENST00000493271 ST13P5Q8NFI4 369 aaPredicted RBP12.1□□□□□ -0.47
SNRNP200-207ENST00000493271 DEPDC1BQ8WUY9 529 aa12.1□□□□□ -0.47
SNRNP200-207ENST00000493271 MCRS1Q96EZ8 462 aa12.1□□□□□ -0.47
SNRNP200-207ENST00000493271 IFT74Q96LB3 600 aa12.1□□□□□ -0.47
SNRNP200-207ENST00000493271 PPP1R10Q96QC0 940 aaKnown RBP12.1□□□□□ -0.47
SNRNP200-207ENST00000493271 LARP6Q9BRS8 491 aaKnown RBP12.1□□□□□ -0.47
SNRNP200-207ENST00000493271 CHRDQ9H2X0 955 aa12.1□□□□□ -0.47
SNRNP200-207ENST00000493271 BRD9Q9H8M2 597 aa12.1□□□□□ -0.47
SNRNP200-207ENST00000493271 ZFP14Q9HCL3 533 aa12.1□□□□□ -0.47
SNRNP200-207ENST00000493271 HEBP1Q9NRV9 189 aa12.1□□□□□ -0.47
SNRNP200-207ENST00000493271 GJB4Q9NTQ9 266 aa12.1□□□□□ -0.47
SNRNP200-207ENST00000493271 HCFC1R1Q9NWW0 138 aa12.1□□□□□ -0.47
SNRNP200-207ENST00000493271 USP18Q9UMW8 372 aa12.1□□□□□ -0.47
SNRNP200-207ENST00000493271 PRRG1O14668 218 aa12.09□□□□□ -0.47
SNRNP200-207ENST00000493271 ABLIM3O94929 683 aa12.09□□□□□ -0.47
SNRNP200-207ENST00000493271 SPATA31C1P0DKV0 1188 aa12.09□□□□□ -0.47
SNRNP200-207ENST00000493271 RPA1P27694 616 aa12.09□□□□□ -0.47
SNRNP200-207ENST00000493271 TKTP29401 623 aaKnown RBP12.09□□□□□ -0.47
SNRNP200-207ENST00000493271 CNR2P34972 360 aa12.09□□□□□ -0.47
SNRNP200-207ENST00000493271 ROR1Q01973 937 aa12.09□□□□□ -0.47
SNRNP200-207ENST00000493271 MTAPQ13126 283 aa12.09□□□□□ -0.47
SNRNP200-207ENST00000493271 FZD5Q13467 585 aa12.09□□□□□ -0.47
SNRNP200-207ENST00000493271 PRSS36Q5K4E3 855 aa12.09□□□□□ -0.47
SNRNP200-207ENST00000493271 CYP4A22Q5TCH4 519 aa12.09□□□□□ -0.47
SNRNP200-207ENST00000493271 ATF7IP2Q5U623 682 aa12.09□□□□□ -0.47
SNRNP200-207ENST00000493271 HAUS3Q68CZ6 603 aa12.09□□□□□ -0.47
SNRNP200-207ENST00000493271 LAIR1Q6GTX8 287 aa12.09□□□□□ -0.47
SNRNP200-207ENST00000493271 IQCEQ6IPM2 695 aa12.09□□□□□ -0.47
SNRNP200-207ENST00000493271 PADI6Q6TGC4 694 aa12.09□□□□□ -0.47
SNRNP200-207ENST00000493271 PDZD4Q76G19 769 aaPredicted RBP12.09□□□□□ -0.47
SNRNP200-207ENST00000493271 ELMOD1Q8N336 334 aa12.09□□□□□ -0.47
SNRNP200-207ENST00000493271 ING5Q8WYH8 240 aa12.09□□□□□ -0.47
SNRNP200-207ENST00000493271 KIFAP3Q92845 792 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms