RNA–Protein interactions for RNA: ENST00000493026.2

PSMD11-205, Transcript of proteasome 26S subunit, non-ATPase 11, human

TSL 2

Gene PSMD11, Length 2,387 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD11-205	ENST00000493026	TMOD1	P28289	359 aa		13.65	□□□□□ -0.22
PSMD11-205	ENST00000493026	MXI1	P50539	228 aa		13.65	□□□□□ -0.22
PSMD11-205	ENST00000493026	PLTP	P55058	493 aa		13.65	□□□□□ -0.22
PSMD11-205	ENST00000493026	MFAP3	P55082	362 aa		13.65	□□□□□ -0.22
PSMD11-205	ENST00000493026	FKBP1C	Q5VVH2	108 aa		13.65	□□□□□ -0.22
PSMD11-205	ENST00000493026	FBXW10	Q5XX13	1052 aa		13.65	□□□□□ -0.22
PSMD11-205	ENST00000493026	CCDC174	Q6PII3	467 aa		13.65	□□□□□ -0.22
PSMD11-205	ENST00000493026	KCNV1	Q6PIU1	500 aa		13.65	□□□□□ -0.22
PSMD11-205	ENST00000493026	FBXO25	Q8TCJ0	367 aa		13.65	□□□□□ -0.22
PSMD11-205	ENST00000493026	SHC3	Q92529	594 aa		13.65	□□□□□ -0.22
PSMD11-205	ENST00000493026	SENP7	Q9BQF6	1050 aa		13.65	□□□□□ -0.22
PSMD11-205	ENST00000493026	PLVAP	Q9BX97	442 aa		13.65	□□□□□ -0.22
PSMD11-205	ENST00000493026	TRIM31	Q9BZY9	425 aa		13.65	□□□□□ -0.22
PSMD11-205	ENST00000493026	HSPBP1	Q9NZL4	362 aa		13.65	□□□□□ -0.22
PSMD11-205	ENST00000493026	GTF3C4	Q9UKN8	822 aa		13.65	□□□□□ -0.22
PSMD11-205	ENST00000493026	COQ4	Q9Y3A0	265 aa		13.65	□□□□□ -0.22
PSMD11-205	ENST00000493026	ZNF646	O15015	1829 aa	Predicted RBP	13.64	□□□□□ -0.23
PSMD11-205	ENST00000493026	RBBP6	Q7Z6E9	1792 aa	Known RBP	13.64	□□□□□ -0.23
PSMD11-205	ENST00000493026	C3orf80	F5H4A9	247 aa		13.64	□□□□□ -0.23
PSMD11-205	ENST00000493026	DHX15	O43143	795 aa	Known RBP	13.64	□□□□□ -0.23
PSMD11-205	ENST00000493026	GHR	P10912	638 aa		13.64	□□□□□ -0.23
PSMD11-205	ENST00000493026	RARG	P13631	454 aa		13.64	□□□□□ -0.23
PSMD11-205	ENST00000493026	ITGB5	P18084	799 aa		13.64	□□□□□ -0.23
PSMD11-205	ENST00000493026	COMT	P21964	271 aa		13.64	□□□□□ -0.23
PSMD11-205	ENST00000493026	QARS	P47897	775 aa	Known RBP	13.64	□□□□□ -0.23
PSMD11-205	ENST00000493026	RARRES1	P49788	294 aa		13.64	□□□□□ -0.23
PSMD11-205	ENST00000493026	DLG4	P78352	724 aa		13.64	□□□□□ -0.23
PSMD11-205	ENST00000493026	TKFC	Q3LXA3	575 aa		13.64	□□□□□ -0.23
PSMD11-205	ENST00000493026	ARHGEF19	Q8IW93	802 aa		13.64	□□□□□ -0.23
PSMD11-205	ENST00000493026	CCDC13	Q8IYE1	715 aa		13.64	□□□□□ -0.23
PSMD11-205	ENST00000493026	ROPN1B	Q9BZX4	212 aa	Predicted RBP	13.64	□□□□□ -0.23
PSMD11-205	ENST00000493026	ROPN1	Q9HAT0	212 aa	Predicted RBP	13.64	□□□□□ -0.23
PSMD11-205	ENST00000493026	KCNH7	Q9NS40	1196 aa		13.64	□□□□□ -0.23
PSMD11-205	ENST00000493026	EXOC7	Q9UPT5	735 aa		13.64	□□□□□ -0.23
PSMD11-205	ENST00000493026	SNX24	Q9Y343	169 aa		13.64	□□□□□ -0.23
PSMD11-205	ENST00000493026	DCDC2C	A8MYV0	355 aa		13.64	□□□□□ -0.23
PSMD11-205	ENST00000493026	ASAP2	O43150	1006 aa		13.64	□□□□□ -0.23
PSMD11-205	ENST00000493026	CAND2	O75155	1236 aa		13.64	□□□□□ -0.23
PSMD11-205	ENST00000493026	ICAM1	P05362	532 aa		13.64	□□□□□ -0.23
PSMD11-205	ENST00000493026	FDX1	P10109	184 aa		13.64	□□□□□ -0.23
PSMD11-205	ENST00000493026	CHRNB2	P17787	502 aa		13.64	□□□□□ -0.23
PSMD11-205	ENST00000493026	DRD4	P21917	467 aa		13.64	□□□□□ -0.23
PSMD11-205	ENST00000493026	GTF2H1	P32780	548 aa		13.64	□□□□□ -0.23
PSMD11-205	ENST00000493026	TNFAIP8L3	Q5GJ75	292 aa		13.64	□□□□□ -0.23
PSMD11-205	ENST00000493026	MFSD5	Q6N075	450 aa		13.64	□□□□□ -0.23
PSMD11-205	ENST00000493026	SLC30A10	Q6XR72	485 aa		13.64	□□□□□ -0.23
PSMD11-205	ENST00000493026	CPLX4	Q7Z7G2	160 aa		13.64	□□□□□ -0.23
PSMD11-205	ENST00000493026	SLC13A5	Q86YT5	568 aa	Predicted RBP	13.64	□□□□□ -0.23
PSMD11-205	ENST00000493026	RDH13	Q8NBN7	331 aa		13.64	□□□□□ -0.23
PSMD11-205	ENST00000493026	KRT35	Q92764	455 aa		13.64	□□□□□ -0.23
PSMD11-205	ENST00000493026	CNKSR1	Q969H4	720 aa		13.64	□□□□□ -0.23
PSMD11-205	ENST00000493026	C18orf8	Q96DM3	657 aa		13.64	□□□□□ -0.23
PSMD11-205	ENST00000493026	YY1AP1	Q9H869	796 aa		13.64	□□□□□ -0.23
PSMD11-205	ENST00000493026	TBC1D22B	Q9NU19	505 aa		13.64	□□□□□ -0.23
PSMD11-205	ENST00000493026	TMOD4	Q9NZQ9	345 aa		13.64	□□□□□ -0.23
PSMD11-205	ENST00000493026	ZHX2	Q9Y6X8	837 aa		13.64	□□□□□ -0.23
PSMD11-205	ENST00000493026	PASK	Q96RG2	1323 aa		13.63	□□□□□ -0.23
PSMD11-205	ENST00000493026	RASSF9	O75901	435 aa		13.63	□□□□□ -0.23
PSMD11-205	ENST00000493026	GCLM	P48507	274 aa		13.63	□□□□□ -0.23
PSMD11-205	ENST00000493026	NCKAP1L	P55160	1127 aa		13.63	□□□□□ -0.23
PSMD11-205	ENST00000493026	NR1H3	Q13133	447 aa		13.63	□□□□□ -0.23
PSMD11-205	ENST00000493026	RASA3	Q14644	834 aa		13.63	□□□□□ -0.23
PSMD11-205	ENST00000493026	CCDC137	Q6PK04	289 aa	Known RBP	13.63	□□□□□ -0.23
PSMD11-205	ENST00000493026	TRMT10C	Q7L0Y3	403 aa	Known RBP	13.63	□□□□□ -0.23
PSMD11-205	ENST00000493026	GET4	Q7L5D6	327 aa	Predicted RBP	13.63	□□□□□ -0.23
PSMD11-205	ENST00000493026	KRT27	Q7Z3Y8	459 aa		13.63	□□□□□ -0.23
PSMD11-205	ENST00000493026	HAUS6	Q7Z4H7	955 aa		13.63	□□□□□ -0.23
PSMD11-205	ENST00000493026	USP37	Q86T82	979 aa		13.63	□□□□□ -0.23
PSMD11-205	ENST00000493026	C4orf19	Q8IY42	314 aa		13.63	□□□□□ -0.23
PSMD11-205	ENST00000493026	ART4	Q93070	314 aa		13.63	□□□□□ -0.23
PSMD11-205	ENST00000493026	FAM81B	Q96LP2	452 aa		13.63	□□□□□ -0.23
PSMD11-205	ENST00000493026	CBWD1	Q9BRT8	395 aa		13.63	□□□□□ -0.23
PSMD11-205	ENST00000493026	TMEM117	Q9H0C3	514 aa		13.63	□□□□□ -0.23
PSMD11-205	ENST00000493026	LRRC19	Q9H756	370 aa		13.63	□□□□□ -0.23
PSMD11-205	ENST00000493026	SNTG2	Q9NY99	539 aa		13.63	□□□□□ -0.23
PSMD11-205	ENST00000493026	UBIAD1	Q9Y5Z9	338 aa		13.63	□□□□□ -0.23
PSMD11-205	ENST00000493026	SCN9A	Q15858	1988 aa		13.63	□□□□□ -0.23
PSMD11-205	ENST00000493026	GPR182	O15218	404 aa		13.63	□□□□□ -0.23
PSMD11-205	ENST00000493026	RGS16	O15492	202 aa	Predicted RBP	13.63	□□□□□ -0.23
PSMD11-205	ENST00000493026	CD53	P19397	219 aa		13.63	□□□□□ -0.23
PSMD11-205	ENST00000493026	COIL	P38432	576 aa	Predicted RBP	13.63	□□□□□ -0.23
PSMD11-205	ENST00000493026	RPL21	P46778	160 aa	Known RBP	13.63	□□□□□ -0.23
PSMD11-205	ENST00000493026	GPC3	P51654	580 aa		13.63	□□□□□ -0.23
PSMD11-205	ENST00000493026	DALRD3	Q5D0E6	543 aa	Known RBP	13.63	□□□□□ -0.23
PSMD11-205	ENST00000493026	PCNX4	Q63HM2	1172 aa		13.63	□□□□□ -0.23
PSMD11-205	ENST00000493026	SYDE1	Q6ZW31	735 aa	Predicted RBP	13.63	□□□□□ -0.23
PSMD11-205	ENST00000493026	CCDC50	Q8IVM0	306 aa		13.63	□□□□□ -0.23
PSMD11-205	ENST00000493026	C7orf43	Q8WVR3	580 aa		13.63	□□□□□ -0.23
PSMD11-205	ENST00000493026	ZNF317	Q96PQ6	595 aa	Predicted RBP	13.63	□□□□□ -0.23
PSMD11-205	ENST00000493026	PCDHB18P	Q96TA0	734 aa		13.63	□□□□□ -0.23
PSMD11-205	ENST00000493026	INO80B	Q9C086	356 aa	Predicted RBP	13.63	□□□□□ -0.23
PSMD11-205	ENST00000493026	AGO4	Q9HCK5	861 aa	Known RBP	13.63	□□□□□ -0.23
PSMD11-205	ENST00000493026	CYLD	Q9NQC7	956 aa		13.63	□□□□□ -0.23
PSMD11-205	ENST00000493026	PLSCR1	O15162	318 aa		13.62	□□□□□ -0.23
PSMD11-205	ENST00000493026	MAN1A1	P33908	653 aa		13.62	□□□□□ -0.23
PSMD11-205	ENST00000493026	RWDD2B	P57060	319 aa		13.62	□□□□□ -0.23
PSMD11-205	ENST00000493026	UBXN2A	P68543	259 aa		13.62	□□□□□ -0.23
PSMD11-205	ENST00000493026	CDR2	Q01850	454 aa		13.62	□□□□□ -0.23
PSMD11-205	ENST00000493026	SLC29A2	Q14542	456 aa		13.62	□□□□□ -0.23
PSMD11-205	ENST00000493026	ITIH4	Q14624	930 aa		13.62	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms