RNA–Protein interactions for RNA: ENST00000492772.1

SND1-215, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-215ENST00000492772 SNTG2Q9NY99 539 aa12.15□□□□□ -0.46
SND1-215ENST00000492772 DNMT3BQ9UBC3 853 aaKnown RBP12.15□□□□□ -0.46
SND1-215ENST00000492772 GMEB2Q9UKD1 530 aa12.15□□□□□ -0.46
SND1-215ENST00000492772 FAM205CA6NFA0 338 aa12.14□□□□□ -0.47
SND1-215ENST00000492772 TRAPPC3O43617 180 aa12.14□□□□□ -0.47
SND1-215ENST00000492772 PRKCBP05771 671 aa12.14□□□□□ -0.47
SND1-215ENST00000492772 RHOP08100 348 aa12.14□□□□□ -0.47
SND1-215ENST00000492772 NR5A1Q13285 461 aa12.14□□□□□ -0.47
SND1-215ENST00000492772 PPP2R5DQ14738 602 aa12.14□□□□□ -0.47
SND1-215ENST00000492772 DCAF4L1Q3SXM0 396 aa12.14□□□□□ -0.47
SND1-215ENST00000492772 ANKS3Q6ZW76 656 aa12.14□□□□□ -0.47
SND1-215ENST00000492772 TNFRSF25Q93038 417 aa12.14□□□□□ -0.47
SND1-215ENST00000492772 ELSPBP1Q96BH3 223 aa12.14□□□□□ -0.47
SND1-215ENST00000492772 CNTNAP3BQ96NU0 1288 aa12.14□□□□□ -0.47
SND1-215ENST00000492772 RTKNQ9BST9 563 aa12.14□□□□□ -0.47
SND1-215ENST00000492772 CNTNAP3Q9BZ76 1288 aa12.14□□□□□ -0.47
SND1-215ENST00000492772 GPRC5CQ9NQ84 441 aa12.14□□□□□ -0.47
SND1-215ENST00000492772 GJB4Q9NTQ9 266 aa12.14□□□□□ -0.47
SND1-215ENST00000492772 BACE2Q9Y5Z0 518 aa12.14□□□□□ -0.47
SND1-215ENST00000492772 CDY1Q9Y6F8 540 aa12.14□□□□□ -0.47
SND1-215ENST00000492772 ACKR2O00590 384 aa12.13□□□□□ -0.47
SND1-215ENST00000492772 MAN2B1O00754 1011 aa12.13□□□□□ -0.47
SND1-215ENST00000492772 PFKFB2O60825 505 aa12.13□□□□□ -0.47
SND1-215ENST00000492772 B3GAT3O94766 335 aa12.13□□□□□ -0.47
SND1-215ENST00000492772 LRG1P02750 347 aa12.13□□□□□ -0.47
SND1-215ENST00000492772 ATP2B1P20020 1258 aa12.13□□□□□ -0.47
SND1-215ENST00000492772 TXKP42681 527 aa12.13□□□□□ -0.47
SND1-215ENST00000492772 NAMPTP43490 491 aa12.13□□□□□ -0.47
SND1-215ENST00000492772 ATXN1P54253 815 aaKnown RBP12.13□□□□□ -0.47
SND1-215ENST00000492772 NRLP54845 237 aa12.13□□□□□ -0.47
SND1-215ENST00000492772 ADCY1Q08828 1119 aa12.13□□□□□ -0.47
SND1-215ENST00000492772 PPP2R5AQ15172 486 aa12.13□□□□□ -0.47
SND1-215ENST00000492772 SLC5A9Q2M3M2 681 aa12.13□□□□□ -0.47
SND1-215ENST00000492772 MAEAQ7L5Y9 396 aa12.13□□□□□ -0.47
SND1-215ENST00000492772 APBB1IPQ7Z5R6 666 aaPredicted RBP12.13□□□□□ -0.47
SND1-215ENST00000492772 NOSTRINQ8IVI9 506 aa12.13□□□□□ -0.47
SND1-215ENST00000492772 DDX27Q96GQ7 796 aaKnown RBP12.13□□□□□ -0.47
SND1-215ENST00000492772 PPP1R10Q96QC0 940 aaKnown RBP12.13□□□□□ -0.47
SND1-215ENST00000492772 CCDC113Q9H0I3 377 aa12.13□□□□□ -0.47
SND1-215ENST00000492772 TUFT1Q9NNX1 390 aa12.13□□□□□ -0.47
SND1-215ENST00000492772 HEBP1Q9NRV9 189 aa12.13□□□□□ -0.47
SND1-215ENST00000492772 ORC3Q9UBD5 711 aaPredicted RBP12.13□□□□□ -0.47
SND1-215ENST00000492772 USP18Q9UMW8 372 aa12.13□□□□□ -0.47
SND1-215ENST00000492772 GDAQ9Y2T3 454 aa12.13□□□□□ -0.47
SND1-215ENST00000492772 ACACBO00763 2458 aa12.12□□□□□ -0.47
SND1-215ENST00000492772 ARHGEF37A1IGU5 675 aa12.12□□□□□ -0.47
SND1-215ENST00000492772 TTLL13PA6NNM8 815 aa12.12□□□□□ -0.47
SND1-215ENST00000492772 CEBPBP17676 345 aa12.12□□□□□ -0.47
SND1-215ENST00000492772 PTPN2P17706 415 aa12.12□□□□□ -0.47
SND1-215ENST00000492772 TKTP29401 623 aaKnown RBP12.12□□□□□ -0.47
SND1-215ENST00000492772 CLCNKBP51801 687 aa12.12□□□□□ -0.47
SND1-215ENST00000492772 MTAPQ13126 283 aa12.12□□□□□ -0.47
SND1-215ENST00000492772 SLC8B1Q6J4K2 584 aa12.12□□□□□ -0.47
SND1-215ENST00000492772 TSSK4Q6SA08 328 aa12.12□□□□□ -0.47
SND1-215ENST00000492772 DEPTORQ8TB45 409 aa12.12□□□□□ -0.47
SND1-215ENST00000492772 MCRS1Q96EZ8 462 aa12.12□□□□□ -0.47
SND1-215ENST00000492772 MTMR9Q96QG7 549 aa12.12□□□□□ -0.47
SND1-215ENST00000492772 NACC1Q96RE7 527 aa12.12□□□□□ -0.47
SND1-215ENST00000492772 CXCL16Q9H2A7 254 aa12.12□□□□□ -0.47
SND1-215ENST00000492772 CHRDQ9H2X0 955 aa12.12□□□□□ -0.47
SND1-215ENST00000492772 BRD9Q9H8M2 597 aa12.12□□□□□ -0.47
SND1-215ENST00000492772 RAB23Q9ULC3 237 aa12.12□□□□□ -0.47
SND1-215ENST00000492772 TICRRQ7Z2Z1 1910 aa12.11□□□□□ -0.47
SND1-215ENST00000492772 TRIP11Q15643 1979 aa12.11□□□□□ -0.47
SND1-215ENST00000492772 PRRG1O14668 218 aa12.11□□□□□ -0.47
SND1-215ENST00000492772 ZNF197O14709 1029 aa12.11□□□□□ -0.47
SND1-215ENST00000492772 MICAL2O94851 1124 aa12.11□□□□□ -0.47
SND1-215ENST00000492772 SPATA31C1P0DKV0 1188 aa12.11□□□□□ -0.47
SND1-215ENST00000492772 LIG1P18858 919 aa12.11□□□□□ -0.47
SND1-215ENST00000492772 FCARP24071 287 aa12.11□□□□□ -0.47
SND1-215ENST00000492772 ELF1P32519 619 aa12.11□□□□□ -0.47
SND1-215ENST00000492772 EFNA5P52803 228 aa12.11□□□□□ -0.47
SND1-215ENST00000492772 ROR1Q01973 937 aa12.11□□□□□ -0.47
SND1-215ENST00000492772 FZD5Q13467 585 aa12.11□□□□□ -0.47
SND1-215ENST00000492772 UPP1Q16831 310 aa12.11□□□□□ -0.47
SND1-215ENST00000492772 GLRA4Q5JXX5 417 aa12.11□□□□□ -0.47
SND1-215ENST00000492772 EEF1DP3Q658K8 133 aa12.11□□□□□ -0.47
SND1-215ENST00000492772 LAIR1Q6GTX8 287 aa12.11□□□□□ -0.47
SND1-215ENST00000492772 TANGO2Q6ICL3 276 aa12.11□□□□□ -0.47
SND1-215ENST00000492772 MAMSTRQ6ZN01 415 aa12.11□□□□□ -0.47
SND1-215ENST00000492772 ZNF461Q8TAF7 563 aa12.11□□□□□ -0.47
SND1-215ENST00000492772 ERMNQ8TAM6 284 aa12.11□□□□□ -0.47
SND1-215ENST00000492772 BSNDQ8WZ55 320 aa12.11□□□□□ -0.47
SND1-215ENST00000492772 IRF7Q92985 503 aa12.11□□□□□ -0.47
SND1-215ENST00000492772 PLA2G2FQ9BZM2 168 aa12.11□□□□□ -0.47
SND1-215ENST00000492772 ZFP14Q9HCL3 533 aa12.11□□□□□ -0.47
SND1-215ENST00000492772 NDRG2Q9UN36 371 aaKnown RBP12.11□□□□□ -0.47
SND1-215ENST00000492772 TPRP12270 2363 aaKnown RBP12.1□□□□□ -0.47
SND1-215ENST00000492772 A0A087WWV3 80 aa12.1□□□□□ -0.47
SND1-215ENST00000492772 ARHGEF35A5YM69 484 aa12.1□□□□□ -0.47
SND1-215ENST00000492772 LRP3O75074 770 aa12.1□□□□□ -0.47
SND1-215ENST00000492772 ABLIM3O94929 683 aa12.1□□□□□ -0.47
SND1-215ENST00000492772 CTDNEP1O95476 244 aa12.1□□□□□ -0.47
SND1-215ENST00000492772 EDN1P05305 212 aa12.1□□□□□ -0.47
SND1-215ENST00000492772 TDGF1P13385 188 aa12.1□□□□□ -0.47
SND1-215ENST00000492772 CYP11B2P19099 503 aa12.1□□□□□ -0.47
SND1-215ENST00000492772 TGM1P22735 817 aa12.1□□□□□ -0.47
SND1-215ENST00000492772 CCR3P51677 355 aa12.1□□□□□ -0.47
SND1-215ENST00000492772 YARSP54577 528 aaKnown RBP12.1□□□□□ -0.47
SND1-215ENST00000492772 GRM2Q14416 872 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms