RNA–Protein interactions for RNA: ENST00000492275.5

TTC3-223, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 3

Gene TTC3, Length 769 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-223ENST00000492275 SLC38A7Q9NVC3 462 aa28.09■■■□□ 2.09
TTC3-223ENST00000492275 HIDE1A8MVS5 230 aa28.08■■■□□ 2.09
TTC3-223ENST00000492275 RHOBTB3O94955 611 aa28.08■■■□□ 2.09
TTC3-223ENST00000492275 KIF4AO95239 1232 aa28.08■■■□□ 2.09
TTC3-223ENST00000492275 CTSAP10619 480 aa28.08■■■□□ 2.09
TTC3-223ENST00000492275 CLCNKBP51801 687 aa28.08■■■□□ 2.09
TTC3-223ENST00000492275 CD300LGQ6UXG3 332 aa28.08■■■□□ 2.09
TTC3-223ENST00000492275 MRPL43Q8N983 215 aaKnown RBP28.08■■■□□ 2.09
TTC3-223ENST00000492275 CCDC34Q96HJ3 373 aa28.08■■■□□ 2.09
TTC3-223ENST00000492275 GPR62Q9BZJ7 368 aa28.08■■■□□ 2.09
TTC3-223ENST00000492275 ADAM28Q9UKQ2 775 aa28.08■■■□□ 2.09
TTC3-223ENST00000492275 BRWD1Q9NSI6 2320 aa28.07■■■□□ 2.08
TTC3-223ENST00000492275 PRPF40AO75400 957 aaKnown RBP28.07■■■□□ 2.08
TTC3-223ENST00000492275 CXCL14O95715 111 aa28.07■■■□□ 2.08
TTC3-223ENST00000492275 POU5F1Q01860 360 aaKnown RBP28.07■■■□□ 2.08
TTC3-223ENST00000492275 PPP2R3AQ06190 1150 aa28.07■■■□□ 2.08
TTC3-223ENST00000492275 KCNB1Q14721 858 aa28.07■■■□□ 2.08
TTC3-223ENST00000492275 UPP1Q16831 310 aa28.07■■■□□ 2.08
TTC3-223ENST00000492275 KNOP1Q1ED39 458 aaKnown RBP28.07■■■□□ 2.08
TTC3-223ENST00000492275 ARMCX5Q6P1M9 558 aa28.07■■■□□ 2.08
TTC3-223ENST00000492275 RBM23Q86U06 439 aaKnown RBP28.07■■■□□ 2.08
TTC3-223ENST00000492275 TMEM130Q8N3G9 435 aa28.07■■■□□ 2.08
TTC3-223ENST00000492275 AUTS2Q8WXX7 1259 aa28.07■■■□□ 2.08
TTC3-223ENST00000492275 FAM212AQ96EL1 285 aa28.07■■■□□ 2.08
TTC3-223ENST00000492275 UROC1Q96N76 676 aa28.07■■■□□ 2.08
TTC3-223ENST00000492275 FAM213AQ9BRX8 229 aa28.07■■■□□ 2.08
TTC3-223ENST00000492275 GOLGA8IPA6NC78 632 aa28.06■■■□□ 2.08
TTC3-223ENST00000492275 C2orf71A6NGG8 1288 aa28.06■■■□□ 2.08
TTC3-223ENST00000492275 GOLGA8JA6NMD2 632 aa28.06■■■□□ 2.08
TTC3-223ENST00000492275 TADA2AO75478 443 aa28.06■■■□□ 2.08
TTC3-223ENST00000492275 SOD2P04179 222 aa28.06■■■□□ 2.08
TTC3-223ENST00000492275 UBE2HP62256 183 aa28.06■■■□□ 2.08
TTC3-223ENST00000492275 SMC1AQ14683 1233 aaKnown RBP28.06■■■□□ 2.08
TTC3-223ENST00000492275 COL19A1Q14993 1142 aa28.06■■■□□ 2.08
TTC3-223ENST00000492275 FUT10Q6P4F1 479 aa28.06■■■□□ 2.08
TTC3-223ENST00000492275 DCLRE1AQ6PJP8 1040 aa28.06■■■□□ 2.08
TTC3-223ENST00000492275 CD302Q8IX05 232 aa28.06■■■□□ 2.08
TTC3-223ENST00000492275 HASPINQ8TF76 798 aa28.06■■■□□ 2.08
TTC3-223ENST00000492275 KIF12Q96FN5 646 aa28.06■■■□□ 2.08
TTC3-223ENST00000492275 IGFLR1Q9H665 355 aa28.06■■■□□ 2.08
TTC3-223ENST00000492275 AGPAT3Q9NRZ7 376 aa28.06■■■□□ 2.08
TTC3-223ENST00000492275 STK39Q9UEW8 545 aa28.06■■■□□ 2.08
TTC3-223ENST00000492275 TUBGCP4Q9UGJ1 667 aa28.06■■■□□ 2.08
TTC3-223ENST00000492275 PRUNE2Q8WUY3 3088 aa28.05■■■□□ 2.08
TTC3-223ENST00000492275 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP28.05■■■□□ 2.08
TTC3-223ENST00000492275 VWA8A3KMH1 1905 aa28.05■■■□□ 2.08
TTC3-223ENST00000492275 PER2O15055 1255 aa28.05■■■□□ 2.08
TTC3-223ENST00000492275 EXTL3O43909 919 aa28.05■■■□□ 2.08
TTC3-223ENST00000492275 LDHAP00338 332 aaKnown RBP28.05■■■□□ 2.08
TTC3-223ENST00000492275 NRIP1P48552 1158 aa28.05■■■□□ 2.08
TTC3-223ENST00000492275 ERCC4Q92889 916 aaPredicted RBP28.05■■■□□ 2.08
TTC3-223ENST00000492275 CCDC47Q96A33 483 aaKnown RBP28.05■■■□□ 2.08
TTC3-223ENST00000492275 DDX27Q96GQ7 796 aaKnown RBP28.05■■■□□ 2.08
TTC3-223ENST00000492275 HERC2P3Q9BVR0 1158 aa28.05■■■□□ 2.08
TTC3-223ENST00000492275 TLE6Q9H808 572 aa28.05■■■□□ 2.08
TTC3-223ENST00000492275 IRAK3Q9Y616 596 aa28.05■■■□□ 2.08
TTC3-223ENST00000492275 TMEM189-UBE2V1I3L0A0 370 aa28.04■■■□□ 2.08
TTC3-223ENST00000492275 LILRB3O75022 631 aa28.04■■■□□ 2.08
TTC3-223ENST00000492275 WNT7BP56706 349 aa28.04■■■□□ 2.08
TTC3-223ENST00000492275 JADE1Q6IE81 842 aa28.04■■■□□ 2.08
TTC3-223ENST00000492275 ELOA2Q8IYF1 753 aaPredicted RBP28.04■■■□□ 2.08
TTC3-223ENST00000492275 C3orf58Q8NDZ4 430 aa28.04■■■□□ 2.08
TTC3-223ENST00000492275 PPP2R3CQ969Q6 453 aa28.04■■■□□ 2.08
TTC3-223ENST00000492275 TSPAN18Q96SJ8 248 aa28.04■■■□□ 2.08
TTC3-223ENST00000492275 ASB7Q9H672 318 aa28.04■■■□□ 2.08
TTC3-223ENST00000492275 CHST7Q9NS84 486 aa28.04■■■□□ 2.08
TTC3-223ENST00000492275 HSPBP1Q9NZL4 362 aa28.04■■■□□ 2.08
TTC3-223ENST00000492275 KIAA0391O15091 583 aaKnown RBP28.03■■■□□ 2.08
TTC3-223ENST00000492275 CLIC2O15247 247 aa28.03■■■□□ 2.08
TTC3-223ENST00000492275 LINC01565O15544 149 aa28.03■■■□□ 2.08
TTC3-223ENST00000492275 B3GAT3O94766 335 aa28.03■■■□□ 2.08
TTC3-223ENST00000492275 NFICP08651 508 aa28.03■■■□□ 2.08
TTC3-223ENST00000492275 RPL9P32969 192 aaKnown RBP28.03■■■□□ 2.08
TTC3-223ENST00000492275 SNRPFP62306 86 aaKnown RBP28.03■■■□□ 2.08
TTC3-223ENST00000492275 BMS1Q14692 1282 aaKnown RBP28.03■■■□□ 2.08
TTC3-223ENST00000492275 PTPN14Q15678 1187 aa28.03■■■□□ 2.08
TTC3-223ENST00000492275 DUSP6Q16828 381 aa28.03■■■□□ 2.08
TTC3-223ENST00000492275 CTC1Q2NKJ3 1217 aa28.03■■■□□ 2.08
TTC3-223ENST00000492275 GPD1LQ8N335 351 aa28.03■■■□□ 2.08
TTC3-223ENST00000492275 SPATA20Q8TB22 786 aa28.03■■■□□ 2.08
TTC3-223ENST00000492275 HLA-CQ95604 372 aa28.03■■■□□ 2.08
TTC3-223ENST00000492275 B3GALT6Q96L58 329 aa28.03■■■□□ 2.08
TTC3-223ENST00000492275 KCTD10Q9H3F6 313 aa28.03■■■□□ 2.08
TTC3-223ENST00000492275 UBQLN1Q9UMX0 589 aaKnown RBP28.03■■■□□ 2.08
TTC3-223ENST00000492275 PCDHA5Q9Y5H7 936 aa28.03■■■□□ 2.08
TTC3-223ENST00000492275 PODXLO00592 558 aa28.02■■■□□ 2.08
TTC3-223ENST00000492275 KINO60870 393 aaKnown RBP28.02■■■□□ 2.08
TTC3-223ENST00000492275 CYP3A5P20815 502 aa28.02■■■□□ 2.08
TTC3-223ENST00000492275 GUCY2FP51841 1108 aa28.02■■■□□ 2.08
TTC3-223ENST00000492275 ADAM15Q13444 863 aa28.02■■■□□ 2.08
TTC3-223ENST00000492275 KIAA0319Q5VV43 1072 aa28.02■■■□□ 2.08
TTC3-223ENST00000492275 BRSK2Q8IWQ3 736 aa28.02■■■□□ 2.08
TTC3-223ENST00000492275 PABPC5Q96DU9 382 aaKnown RBP28.02■■■□□ 2.08
TTC3-223ENST00000492275 COG5Q9UP83 839 aa28.02■■■□□ 2.08
TTC3-223ENST00000492275 DERAQ9Y315 318 aa28.02■■■□□ 2.08
TTC3-223ENST00000492275 SF3B1O75533 1304 aaKnown RBP eCLIP28.01■■■□□ 2.073e-7■■■■■ 46.9
TTC3-223ENST00000492275 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP28.01■■■□□ 2.07
TTC3-223ENST00000492275 NCK2O43639 380 aa28.01■■■□□ 2.07
TTC3-223ENST00000492275 LRPAP1P30533 357 aa28.01■■■□□ 2.07
TTC3-223ENST00000492275 CA8P35219 290 aa28.01■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms