RNA–Protein interactions for RNA: ENST00000491916.1

SS18L1-204, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18L1, Length 456 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-204ENST00000491916 EXOC7Q9UPT5 735 aa16.55■□□□□ 0.24
SS18L1-204ENST00000491916 CLCNKBP51801 687 aa16.54■□□□□ 0.24
SS18L1-204ENST00000491916 SPAG1Q07617 926 aa16.54■□□□□ 0.24
SS18L1-204ENST00000491916 HSP90AA2PQ14568 343 aaPredicted RBP16.54■□□□□ 0.24
SS18L1-204ENST00000491916 POSTNQ15063 836 aa16.54■□□□□ 0.24
SS18L1-204ENST00000491916 KYAT1Q16773 422 aa16.54■□□□□ 0.24
SS18L1-204ENST00000491916 PLPP4Q5VZY2 271 aa16.54■□□□□ 0.24
SS18L1-204ENST00000491916 PDE12Q6L8Q7 609 aaKnown RBP16.54■□□□□ 0.24
SS18L1-204ENST00000491916 VN1R2Q8NFZ6 395 aa16.54■□□□□ 0.24
SS18L1-204ENST00000491916 AUTS2Q8WXX7 1259 aa16.54■□□□□ 0.24
SS18L1-204ENST00000491916 POMGNT1Q8WZA1 660 aa16.54■□□□□ 0.24
SS18L1-204ENST00000491916 TIGD1Q96MW7 591 aa16.54■□□□□ 0.24
SS18L1-204ENST00000491916 COLEC11Q9BWP8 271 aa16.54■□□□□ 0.24
SS18L1-204ENST00000491916 NGRNQ9NPE2 291 aaKnown RBP16.54■□□□□ 0.24
SS18L1-204ENST00000491916 CHST7Q9NS84 486 aa16.54■□□□□ 0.24
SS18L1-204ENST00000491916 ADAM28Q9UKQ2 775 aa16.54■□□□□ 0.24
SS18L1-204ENST00000491916 IRAK3Q9Y616 596 aa16.54■□□□□ 0.24
SS18L1-204ENST00000491916 MUC3AQ02505 3323 aa16.53■□□□□ 0.24
SS18L1-204ENST00000491916 VWA8A3KMH1 1905 aa16.53■□□□□ 0.24
SS18L1-204ENST00000491916 UBE4BO95155 1302 aa16.53■□□□□ 0.24
SS18L1-204ENST00000491916 GOLGA6L4A6NEF3 574 aa16.53■□□□□ 0.24
SS18L1-204ENST00000491916 TMEM189-UBE2V1I3L0A0 370 aa16.53■□□□□ 0.24
SS18L1-204ENST00000491916 PER2O15055 1255 aa16.53■□□□□ 0.24
SS18L1-204ENST00000491916 LINC01565O15544 149 aa16.53■□□□□ 0.24
SS18L1-204ENST00000491916 GLP2RO95838 553 aa16.53■□□□□ 0.24
SS18L1-204ENST00000491916 SOD2P04179 222 aa16.53■□□□□ 0.24
SS18L1-204ENST00000491916 POU5F1Q01860 360 aaKnown RBP16.53■□□□□ 0.24
SS18L1-204ENST00000491916 PSMD2Q13200 908 aa16.53■□□□□ 0.24
SS18L1-204ENST00000491916 ADAM15Q13444 863 aa16.53■□□□□ 0.24
SS18L1-204ENST00000491916 PNOCQ13519 176 aa16.53■□□□□ 0.24
SS18L1-204ENST00000491916 KCNB1Q14721 858 aa16.53■□□□□ 0.24
SS18L1-204ENST00000491916 DUSP6Q16828 381 aa16.53■□□□□ 0.24
SS18L1-204ENST00000491916 KIAA0319Q5VV43 1072 aa16.53■□□□□ 0.24
SS18L1-204ENST00000491916 TMC7Q7Z402 723 aa16.53■□□□□ 0.24
SS18L1-204ENST00000491916 NELFCDQ8IXH7 590 aa16.53■□□□□ 0.24
SS18L1-204ENST00000491916 SAAL1Q96ER3 474 aa16.53■□□□□ 0.24
SS18L1-204ENST00000491916 HERC2P3Q9BVR0 1158 aa16.53■□□□□ 0.24
SS18L1-204ENST00000491916 KCTD10Q9H3F6 313 aa16.53■□□□□ 0.24
SS18L1-204ENST00000491916 PCIF1Q9H4Z3 704 aa16.53■□□□□ 0.24
SS18L1-204ENST00000491916 RPF1Q9H9Y2 349 aaKnown RBP16.53■□□□□ 0.24
SS18L1-204ENST00000491916 AGPAT3Q9NRZ7 376 aa16.53■□□□□ 0.24
SS18L1-204ENST00000491916 EXOC1Q9NV70 894 aa16.53■□□□□ 0.24
SS18L1-204ENST00000491916 TUBGCP4Q9UGJ1 667 aa16.53■□□□□ 0.24
SS18L1-204ENST00000491916 CXCL14O95715 111 aa16.52■□□□□ 0.24
SS18L1-204ENST00000491916 NRIP1P48552 1158 aa16.52■□□□□ 0.24
SS18L1-204ENST00000491916 GUCY2FP51841 1108 aa16.52■□□□□ 0.24
SS18L1-204ENST00000491916 RBM10P98175 930 aaKnown RBP16.52■□□□□ 0.24
SS18L1-204ENST00000491916 TFF2Q03403 129 aa16.52■□□□□ 0.24
SS18L1-204ENST00000491916 DLX2Q07687 328 aaPredicted RBP16.52■□□□□ 0.24
SS18L1-204ENST00000491916 PTPN14Q15678 1187 aa16.52■□□□□ 0.24
SS18L1-204ENST00000491916 KNOP1Q1ED39 458 aaKnown RBP16.52■□□□□ 0.24
SS18L1-204ENST00000491916 JADE1Q6IE81 842 aa16.52■□□□□ 0.24
SS18L1-204ENST00000491916 KANK3Q6NY19 840 aa16.52■□□□□ 0.24
SS18L1-204ENST00000491916 FUT10Q6P4F1 479 aa16.52■□□□□ 0.24
SS18L1-204ENST00000491916 STXBP4Q6ZWJ1 553 aa16.52■□□□□ 0.24
SS18L1-204ENST00000491916 RBM23Q86U06 439 aaKnown RBP16.52■□□□□ 0.24
SS18L1-204ENST00000491916 ELOA2Q8IYF1 753 aaPredicted RBP16.52■□□□□ 0.24
SS18L1-204ENST00000491916 SYCP3Q8IZU3 236 aa16.52■□□□□ 0.24
SS18L1-204ENST00000491916 MICAL1Q8TDZ2 1067 aa16.52■□□□□ 0.24
SS18L1-204ENST00000491916 HASPINQ8TF76 798 aa16.52■□□□□ 0.24
SS18L1-204ENST00000491916 ERCC4Q92889 916 aaPredicted RBP16.52■□□□□ 0.24
SS18L1-204ENST00000491916 PABPC5Q96DU9 382 aaKnown RBP16.52■□□□□ 0.24
SS18L1-204ENST00000491916 FBXL18Q96ME1 805 aa16.52■□□□□ 0.24
SS18L1-204ENST00000491916 FAM213AQ9BRX8 229 aa16.52■□□□□ 0.24
SS18L1-204ENST00000491916 ENTPD7Q9NQZ7 604 aa16.52■□□□□ 0.24
SS18L1-204ENST00000491916 SLC38A7Q9NVC3 462 aa16.52■□□□□ 0.24
SS18L1-204ENST00000491916 GOLGA8IPA6NC78 632 aa16.51■□□□□ 0.23
SS18L1-204ENST00000491916 GOLGA8JA6NMD2 632 aa16.51■□□□□ 0.23
SS18L1-204ENST00000491916 EXTL3O43909 919 aa16.51■□□□□ 0.23
SS18L1-204ENST00000491916 NFICP08651 508 aa16.51■□□□□ 0.23
SS18L1-204ENST00000491916 LRPAP1P30533 357 aa16.51■□□□□ 0.23
SS18L1-204ENST00000491916 DSG1Q02413 1049 aa16.51■□□□□ 0.23
SS18L1-204ENST00000491916 SMC1AQ14683 1233 aaKnown RBP16.51■□□□□ 0.23
SS18L1-204ENST00000491916 SCARA3Q6AZY7 606 aa16.51■□□□□ 0.23
SS18L1-204ENST00000491916 DCLRE1AQ6PJP8 1040 aa16.51■□□□□ 0.23
SS18L1-204ENST00000491916 C12orf56Q8IXR9 622 aa16.51■□□□□ 0.23
SS18L1-204ENST00000491916 EFCAB13Q8IY85 973 aa16.51■□□□□ 0.23
SS18L1-204ENST00000491916 EFHBQ8N7U6 833 aa16.51■□□□□ 0.23
SS18L1-204ENST00000491916 KIF12Q96FN5 646 aa16.51■□□□□ 0.23
SS18L1-204ENST00000491916 B3GALT6Q96L58 329 aa16.51■□□□□ 0.23
SS18L1-204ENST00000491916 UROC1Q96N76 676 aa16.51■□□□□ 0.23
SS18L1-204ENST00000491916 UBE2ZQ9H832 354 aaPredicted RBP16.51■□□□□ 0.23
SS18L1-204ENST00000491916 PODXLO00592 558 aa16.5■□□□□ 0.23
SS18L1-204ENST00000491916 CLIC2O15247 247 aa16.5■□□□□ 0.23
SS18L1-204ENST00000491916 CLASP2O75122 1294 aaKnown RBP16.5■□□□□ 0.23
SS18L1-204ENST00000491916 TBX10O75333 385 aa16.5■□□□□ 0.23
SS18L1-204ENST00000491916 PRPF40AO75400 957 aaKnown RBP16.5■□□□□ 0.23
SS18L1-204ENST00000491916 TADA2AO75478 443 aa16.5■□□□□ 0.23
SS18L1-204ENST00000491916 CYP3A5P20815 502 aa16.5■□□□□ 0.23
SS18L1-204ENST00000491916 RPL9P32969 192 aaKnown RBP16.5■□□□□ 0.23
SS18L1-204ENST00000491916 UBE2HP62256 183 aa16.5■□□□□ 0.23
SS18L1-204ENST00000491916 PPP2R3AQ06190 1150 aa16.5■□□□□ 0.23
SS18L1-204ENST00000491916 SPATA1Q5VX52 437 aa16.5■□□□□ 0.23
SS18L1-204ENST00000491916 ARMCX5Q6P1M9 558 aa16.5■□□□□ 0.23
SS18L1-204ENST00000491916 BRSK2Q8IWQ3 736 aa16.5■□□□□ 0.23
SS18L1-204ENST00000491916 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.5■□□□□ 0.23
SS18L1-204ENST00000491916 CD302Q8IX05 232 aa16.5■□□□□ 0.23
SS18L1-204ENST00000491916 TMEM174Q8WUU8 243 aa16.5■□□□□ 0.23
SS18L1-204ENST00000491916 HLA-CQ95604 372 aa16.5■□□□□ 0.23
SS18L1-204ENST00000491916 TSPAN18Q96SJ8 248 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms