RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 LDAHQ9H6V9 325 aa5.03□□□□□ -1.6
VTA1-204ENST00000491881 WDR26Q9H7D7 661 aa5.03□□□□□ -1.6
VTA1-204ENST00000491881 AGO3Q9H9G7 860 aaKnown RBP5.03□□□□□ -1.6
VTA1-204ENST00000491881 ANLNQ9NQW6 1124 aa5.03□□□□□ -1.6
VTA1-204ENST00000491881 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.03□□□□□ -1.6
VTA1-204ENST00000491881 AJAP1Q9UKB5 411 aaPredicted RBP5.03□□□□□ -1.6
VTA1-204ENST00000491881 VSTM5A8MXK1 200 aa5.02□□□□□ -1.61
VTA1-204ENST00000491881 CYP27B1O15528 508 aa5.02□□□□□ -1.61
VTA1-204ENST00000491881 SGTAO43765 313 aa5.02□□□□□ -1.61
VTA1-204ENST00000491881 GPR32O75388 356 aa5.02□□□□□ -1.61
VTA1-204ENST00000491881 IL2RBP14784 551 aa5.02□□□□□ -1.61
VTA1-204ENST00000491881 SLC6A9P48067 706 aa5.02□□□□□ -1.61
VTA1-204ENST00000491881 CRHR2Q13324 411 aa5.02□□□□□ -1.61
VTA1-204ENST00000491881 ARHGAP29Q52LW3 1261 aa5.02□□□□□ -1.61
VTA1-204ENST00000491881 CCDC157Q569K6 752 aa5.02□□□□□ -1.61
VTA1-204ENST00000491881 ATAT1Q5SQI0 421 aa5.02□□□□□ -1.61
VTA1-204ENST00000491881 THEMIS2Q5TEJ8 643 aa5.02□□□□□ -1.61
VTA1-204ENST00000491881 FAM111BQ6SJ93 734 aa5.02□□□□□ -1.61
VTA1-204ENST00000491881 PCSK4Q6UW60 755 aa5.02□□□□□ -1.61
VTA1-204ENST00000491881 LILRA3Q8N6C8 439 aaPredicted RBP5.02□□□□□ -1.61
VTA1-204ENST00000491881 TTC8Q8TAM2 541 aa5.02□□□□□ -1.61
VTA1-204ENST00000491881 TMX3Q96JJ7 454 aa5.02□□□□□ -1.61
VTA1-204ENST00000491881 CLPTM1LQ96KA5 538 aa5.02□□□□□ -1.61
VTA1-204ENST00000491881 KMT5AQ9NQR1 393 aa5.02□□□□□ -1.61
VTA1-204ENST00000491881 MOCS1Q9NZB8 636 aa5.02□□□□□ -1.61
VTA1-204ENST00000491881 SIK3Q9Y2K2 1263 aa5.02□□□□□ -1.61
VTA1-204ENST00000491881 MYBBP1AQ9BQG0 1328 aaKnown RBP5.01□□□□□ -1.61
VTA1-204ENST00000491881 TEX33O43247 280 aa5.01□□□□□ -1.61
VTA1-204ENST00000491881 FTLP02792 175 aaPredicted RBP5.01□□□□□ -1.61
VTA1-204ENST00000491881 RAP2AP10114 183 aa5.01□□□□□ -1.61
VTA1-204ENST00000491881 GNAT2P19087 354 aa5.01□□□□□ -1.61
VTA1-204ENST00000491881 LMO1P25800 156 aa5.01□□□□□ -1.61
VTA1-204ENST00000491881 GUCY1A2P33402 732 aa5.01□□□□□ -1.61
VTA1-204ENST00000491881 SP140Q13342 867 aa5.01□□□□□ -1.61
VTA1-204ENST00000491881 ATP2B3Q16720 1220 aa5.01□□□□□ -1.61
VTA1-204ENST00000491881 FKBP15Q5T1M5 1219 aa5.01□□□□□ -1.61
VTA1-204ENST00000491881 MFSD5Q6N075 450 aa5.01□□□□□ -1.61
VTA1-204ENST00000491881 GADL1Q6ZQY3 521 aa5.01□□□□□ -1.61
VTA1-204ENST00000491881 NOL8Q76FK4 1167 aaKnown RBP5.01□□□□□ -1.61
VTA1-204ENST00000491881 ULK2Q8IYT8 1036 aa5.01□□□□□ -1.61
VTA1-204ENST00000491881 PRR18Q8N4B5 295 aa5.01□□□□□ -1.61
VTA1-204ENST00000491881 SLC35G2Q8TBE7 412 aa5.01□□□□□ -1.61
VTA1-204ENST00000491881 DIS3LQ8TF46 1054 aaKnown RBP5.01□□□□□ -1.61
VTA1-204ENST00000491881 STON2Q8WXE9 905 aa5.01□□□□□ -1.61
VTA1-204ENST00000491881 VOPP1Q96AW1 172 aa5.01□□□□□ -1.61
VTA1-204ENST00000491881 RGMAQ96B86 450 aa5.01□□□□□ -1.61
VTA1-204ENST00000491881 C1GALT1C1Q96EU7 318 aa5.01□□□□□ -1.61
VTA1-204ENST00000491881 ZNF512Q96ME7 567 aaPredicted RBP5.01□□□□□ -1.61
VTA1-204ENST00000491881 TAAR9Q96RI9 348 aa5.01□□□□□ -1.61
VTA1-204ENST00000491881 HDAC5Q9UQL6 1122 aa5.01□□□□□ -1.61
VTA1-204ENST00000491881 PCDHB1Q9Y5F3 818 aa5.01□□□□□ -1.61
VTA1-204ENST00000491881 ZMYM3Q14202 1370 aa5.01□□□□□ -1.61
VTA1-204ENST00000491881 KRTAP23-1A1A580 65 aa5□□□□□ -1.61
VTA1-204ENST00000491881 B5MCH6 92 aa5□□□□□ -1.61
VTA1-204ENST00000491881 KIF3BO15066 747 aa5□□□□□ -1.61
VTA1-204ENST00000491881 SLC16A6O15403 523 aa5□□□□□ -1.61
VTA1-204ENST00000491881 HOXA3O43365 443 aaPredicted RBP5□□□□□ -1.61
VTA1-204ENST00000491881 CTNND1O60716 968 aaKnown RBP5□□□□□ -1.61
VTA1-204ENST00000491881 PEX11BO96011 259 aa5□□□□□ -1.61
VTA1-204ENST00000491881 KRT4P19013 534 aa5□□□□□ -1.61
VTA1-204ENST00000491881 DDCP20711 480 aa5□□□□□ -1.61
VTA1-204ENST00000491881 BMP5P22003 454 aa5□□□□□ -1.61
VTA1-204ENST00000491881 FLT3LGP49771 235 aa5□□□□□ -1.61
VTA1-204ENST00000491881 FXR1P51114 621 aaKnown RBP eCLIP5□□□□□ -1.61
VTA1-204ENST00000491881 CREMQ03060 361 aa5□□□□□ -1.61
VTA1-204ENST00000491881 FSTL1Q12841 308 aa5□□□□□ -1.61
VTA1-204ENST00000491881 TARDBPQ13148 414 aaKnown RBP eCLIP5□□□□□ -1.61
VTA1-204ENST00000491881 HNRNPA0Q13151 305 aaKnown RBP5□□□□□ -1.61
VTA1-204ENST00000491881 MRPL49Q13405 166 aaKnown RBP5□□□□□ -1.61
VTA1-204ENST00000491881 RRP1BQ14684 758 aaKnown RBP5□□□□□ -1.61
VTA1-204ENST00000491881 RAB39AQ14964 217 aa5□□□□□ -1.61
VTA1-204ENST00000491881 ELAVL1Q15717 326 aaKnown RBP5□□□□□ -1.61
VTA1-204ENST00000491881 FAM214AQ32MH5 1076 aa5□□□□□ -1.61
VTA1-204ENST00000491881 ZNF572Q7Z3I7 529 aaPredicted RBP5□□□□□ -1.61
VTA1-204ENST00000491881 DENND1CQ8IV53 801 aa5□□□□□ -1.61
VTA1-204ENST00000491881 ZGPATQ8N5A5 531 aaKnown RBP5□□□□□ -1.61
VTA1-204ENST00000491881 NSUN6Q8TEA1 469 aaKnown RBP5□□□□□ -1.61
VTA1-204ENST00000491881 CASKIN2Q8WXE0 1202 aa5□□□□□ -1.61
VTA1-204ENST00000491881 CEP95Q96GE4 821 aa5□□□□□ -1.61
VTA1-204ENST00000491881 ACO2Q99798 780 aaKnown RBP5□□□□□ -1.61
VTA1-204ENST00000491881 ENKD1Q9H0I2 346 aa5□□□□□ -1.61
VTA1-204ENST00000491881 PRDM11Q9NQV5 511 aa5□□□□□ -1.61
VTA1-204ENST00000491881 MAN1C1Q9NR34 630 aa5□□□□□ -1.61
VTA1-204ENST00000491881 GEMIN8Q9NWZ8 242 aaKnown RBP5□□□□□ -1.61
VTA1-204ENST00000491881 POLHQ9Y253 713 aa5□□□□□ -1.61
VTA1-204ENST00000491881 RUVBL1Q9Y265 456 aaKnown RBP5□□□□□ -1.61
VTA1-204ENST00000491881 TMEM191CA6NGB0 347 aa4.99□□□□□ -1.61
VTA1-204ENST00000491881 FOXN1O15353 648 aa4.99□□□□□ -1.61
VTA1-204ENST00000491881 STC2O76061 302 aa4.99□□□□□ -1.61
VTA1-204ENST00000491881 IPO13O94829 963 aaKnown RBP4.99□□□□□ -1.61
VTA1-204ENST00000491881 AMY1AP04745 511 aa4.99□□□□□ -1.61
VTA1-204ENST00000491881 ALOX15P16050 662 aaPredicted RBP4.99□□□□□ -1.61
VTA1-204ENST00000491881 FPR1P21462 350 aa4.99□□□□□ -1.61
VTA1-204ENST00000491881 PCSK1P29120 753 aa4.99□□□□□ -1.61
VTA1-204ENST00000491881 ALDH1A3P47895 512 aa4.99□□□□□ -1.61
VTA1-204ENST00000491881 MTM1Q13496 603 aa4.99□□□□□ -1.61
VTA1-204ENST00000491881 FAM47AQ5JRC9 791 aa4.99□□□□□ -1.61
VTA1-204ENST00000491881 MFSD14BQ5SR56 506 aa4.99□□□□□ -1.61
VTA1-204ENST00000491881 AFMIDQ63HM1 303 aa4.99□□□□□ -1.61
VTA1-204ENST00000491881 LAIR1Q6GTX8 287 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms