RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 SEC24AO95486 1093 aa9.77□□□□□ -0.85
HDAC3-211ENST00000491581 OR4Q2P0C623 313 aa9.77□□□□□ -0.85
HDAC3-211ENST00000491581 PLA2G4BP0C869 781 aa9.77□□□□□ -0.85
HDAC3-211ENST00000491581 CXCL8P10145 99 aa9.77□□□□□ -0.85
HDAC3-211ENST00000491581 FGFR3P22607 806 aa9.77□□□□□ -0.85
HDAC3-211ENST00000491581 PROZP22891 400 aa9.77□□□□□ -0.85
HDAC3-211ENST00000491581 GRM5P41594 1212 aa9.77□□□□□ -0.85
HDAC3-211ENST00000491581 ORC2Q13416 577 aaPredicted RBP9.77□□□□□ -0.85
HDAC3-211ENST00000491581 TDGQ13569 410 aa9.77□□□□□ -0.85
HDAC3-211ENST00000491581 MCM6Q14566 821 aa9.77□□□□□ -0.85
HDAC3-211ENST00000491581 KARSQ15046 597 aaKnown RBP9.77□□□□□ -0.85
HDAC3-211ENST00000491581 SLC5A9Q2M3M2 681 aa9.77□□□□□ -0.85
HDAC3-211ENST00000491581 SLC10A6Q3KNW5 377 aa9.77□□□□□ -0.85
HDAC3-211ENST00000491581 TMEM119Q4V9L6 283 aa9.77□□□□□ -0.85
HDAC3-211ENST00000491581 SLC39A4Q6P5W5 647 aa9.77□□□□□ -0.85
HDAC3-211ENST00000491581 ALKAL1Q6UXT8 129 aa9.77□□□□□ -0.85
HDAC3-211ENST00000491581 C15orf39Q6ZRI6 1047 aa9.77□□□□□ -0.85
HDAC3-211ENST00000491581 OTOP3Q7RTS5 596 aa9.77□□□□□ -0.85
HDAC3-211ENST00000491581 ASCL5Q7RTU5 278 aa9.77□□□□□ -0.85
HDAC3-211ENST00000491581 GPIHBP1Q8IV16 184 aa9.77□□□□□ -0.85
HDAC3-211ENST00000491581 SLC44A3Q8N4M1 653 aa9.77□□□□□ -0.85
HDAC3-211ENST00000491581 TMEM161BQ8NDZ6 487 aa9.77□□□□□ -0.85
HDAC3-211ENST00000491581 GPR152Q8TDT2 470 aa9.77□□□□□ -0.85
HDAC3-211ENST00000491581 PIK3R5Q8WYR1 880 aa9.77□□□□□ -0.85
HDAC3-211ENST00000491581 KIFAP3Q92845 792 aa9.77□□□□□ -0.85
HDAC3-211ENST00000491581 ATOH1Q92858 354 aaPredicted RBP9.77□□□□□ -0.85
HDAC3-211ENST00000491581 SNX27Q96L92 541 aa9.77□□□□□ -0.85
HDAC3-211ENST00000491581 KXD1Q9BQD3 176 aa9.77□□□□□ -0.85
HDAC3-211ENST00000491581 REEP2Q9BRK0 252 aa9.77□□□□□ -0.85
HDAC3-211ENST00000491581 ADPGKQ9BRR6 497 aa9.77□□□□□ -0.85
HDAC3-211ENST00000491581 PRKD2Q9BZL6 878 aa9.77□□□□□ -0.85
HDAC3-211ENST00000491581 PLA2G2FQ9BZM2 168 aa9.77□□□□□ -0.85
HDAC3-211ENST00000491581 BLOC1S4Q9NUP1 217 aa9.77□□□□□ -0.85
HDAC3-211ENST00000491581 FNIP2Q9P278 1114 aa9.77□□□□□ -0.85
HDAC3-211ENST00000491581 DNMT3BQ9UBC3 853 aaKnown RBP9.77□□□□□ -0.85
HDAC3-211ENST00000491581 DUSP12Q9UNI6 340 aa9.77□□□□□ -0.85
HDAC3-211ENST00000491581 USTQ9Y2C2 406 aa9.77□□□□□ -0.85
HDAC3-211ENST00000491581 TIMM13Q9Y5L4 95 aaPredicted RBP9.77□□□□□ -0.85
HDAC3-211ENST00000491581 CLIC4Q9Y696 253 aa9.77□□□□□ -0.85
HDAC3-211ENST00000491581 NUMBLQ9Y6R0 609 aa9.77□□□□□ -0.85
HDAC3-211ENST00000491581 WDR27A2RRH5 827 aa9.76□□□□□ -0.85
HDAC3-211ENST00000491581 H3BQV1 296 aa9.76□□□□□ -0.85
HDAC3-211ENST00000491581 PODXLO00592 558 aa9.76□□□□□ -0.85
HDAC3-211ENST00000491581 DCNP07585 359 aaKnown RBP9.76□□□□□ -0.85
HDAC3-211ENST00000491581 MAPTP10636 758 aaKnown RBP9.76□□□□□ -0.85
HDAC3-211ENST00000491581 LAMP2P13473 410 aa9.76□□□□□ -0.85
HDAC3-211ENST00000491581 GJA1P17302 382 aa9.76□□□□□ -0.85
HDAC3-211ENST00000491581 CD72P21854 359 aa9.76□□□□□ -0.85
HDAC3-211ENST00000491581 NMT1P30419 496 aaKnown RBP9.76□□□□□ -0.85
HDAC3-211ENST00000491581 CEBPZQ03701 1054 aaKnown RBP9.76□□□□□ -0.85
HDAC3-211ENST00000491581 DMP1Q13316 513 aaPredicted RBP9.76□□□□□ -0.85
HDAC3-211ENST00000491581 HTR4Q13639 388 aa9.76□□□□□ -0.85
HDAC3-211ENST00000491581 PPP2R5AQ15172 486 aa9.76□□□□□ -0.85
HDAC3-211ENST00000491581 DCAF4L1Q3SXM0 396 aa9.76□□□□□ -0.85
HDAC3-211ENST00000491581 ZC2HC1CQ53FD0 456 aaPredicted RBP9.76□□□□□ -0.85
HDAC3-211ENST00000491581 PPM1LQ5SGD2 360 aa9.76□□□□□ -0.85
HDAC3-211ENST00000491581 AXDND1Q5T1B0 1012 aaPredicted RBP9.76□□□□□ -0.85
HDAC3-211ENST00000491581 UBALD2Q8IYN6 164 aa9.76□□□□□ -0.85
HDAC3-211ENST00000491581 SYT2Q8N9I0 419 aaPredicted RBP9.76□□□□□ -0.85
HDAC3-211ENST00000491581 ZSWIM2Q8NEG5 633 aa9.76□□□□□ -0.85
HDAC3-211ENST00000491581 CMASQ8NFW8 434 aaPredicted RBP9.76□□□□□ -0.85
HDAC3-211ENST00000491581 RSPH1Q8WYR4 309 aa9.76□□□□□ -0.85
HDAC3-211ENST00000491581 ACSF2Q96CM8 615 aaPredicted RBP9.76□□□□□ -0.85
HDAC3-211ENST00000491581 TCEAL4Q96EI5 215 aa9.76□□□□□ -0.85
HDAC3-211ENST00000491581 TBC1D32Q96NH3 1257 aa9.76□□□□□ -0.85
HDAC3-211ENST00000491581 TCHPQ9BT92 498 aa9.76□□□□□ -0.85
HDAC3-211ENST00000491581 MRPL4Q9BYD3 311 aaKnown RBP9.76□□□□□ -0.85
HDAC3-211ENST00000491581 FOXQ1Q9C009 403 aa9.76□□□□□ -0.85
HDAC3-211ENST00000491581 MFSD1Q9H3U5 465 aa9.76□□□□□ -0.85
HDAC3-211ENST00000491581 MTRRQ9UBK8 725 aa9.76□□□□□ -0.85
HDAC3-211ENST00000491581 FBXL21Q9UKT6 434 aa9.76□□□□□ -0.85
HDAC3-211ENST00000491581 SMC3Q9UQE7 1217 aa9.76□□□□□ -0.85
HDAC3-211ENST00000491581 NCANO14594 1321 aa9.76□□□□□ -0.85
HDAC3-211ENST00000491581 COL4A2P08572 1712 aa9.76□□□□□ -0.85
HDAC3-211ENST00000491581 TICRRQ7Z2Z1 1910 aa9.76□□□□□ -0.85
HDAC3-211ENST00000491581 DMDP11532 3685 aa9.76□□□□□ -0.85
HDAC3-211ENST00000491581 PATJQ8NI35 1801 aa9.75□□□□□ -0.85
HDAC3-211ENST00000491581 KIF26AQ9ULI4 1882 aaPredicted RBP9.75□□□□□ -0.85
HDAC3-211ENST00000491581 VPS37CA5D8V6 355 aaPredicted RBP9.75□□□□□ -0.85
HDAC3-211ENST00000491581 ANKRD63C9JTQ0 380 aa9.75□□□□□ -0.85
HDAC3-211ENST00000491581 ST18O60284 1047 aa9.75□□□□□ -0.85
HDAC3-211ENST00000491581 VNN2O95498 520 aa9.75□□□□□ -0.85
HDAC3-211ENST00000491581 PLS3P13797 630 aa9.75□□□□□ -0.85
HDAC3-211ENST00000491581 GLULP15104 373 aa9.75□□□□□ -0.85
HDAC3-211ENST00000491581 PLCG1P19174 1290 aa9.75□□□□□ -0.85
HDAC3-211ENST00000491581 FSHRP23945 695 aa9.75□□□□□ -0.85
HDAC3-211ENST00000491581 MARCKSP29966 332 aaPredicted RBP9.75□□□□□ -0.85
HDAC3-211ENST00000491581 PRPHP41219 470 aa9.75□□□□□ -0.85
HDAC3-211ENST00000491581 CCR2P41597 374 aa9.75□□□□□ -0.85
HDAC3-211ENST00000491581 EFNA5P52803 228 aa9.75□□□□□ -0.85
HDAC3-211ENST00000491581 PTPN5P54829 565 aa9.75□□□□□ -0.85
HDAC3-211ENST00000491581 WNT7BP56706 349 aa9.75□□□□□ -0.85
HDAC3-211ENST00000491581 GPC5P78333 572 aa9.75□□□□□ -0.85
HDAC3-211ENST00000491581 ROR1Q01973 937 aa9.75□□□□□ -0.85
HDAC3-211ENST00000491581 SF3A1Q15459 793 aaKnown RBP9.75□□□□□ -0.85
HDAC3-211ENST00000491581 XKR4Q5GH76 650 aa9.75□□□□□ -0.85
HDAC3-211ENST00000491581 VARS2Q5ST30 1063 aaKnown RBP9.75□□□□□ -0.85
HDAC3-211ENST00000491581 HYIQ5T013 277 aa9.75□□□□□ -0.85
HDAC3-211ENST00000491581 LARP1BQ659C4 914 aaKnown RBP9.75□□□□□ -0.85
HDAC3-211ENST00000491581 ASTLQ6HA08 431 aaPredicted RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms