RNA–Protein interactions for RNA: ENST00000491433.1

CLCNKA-206, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 3

Gene CLCNKA, Length 824 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-206ENST00000491433 SLC7A14Q8TBB6 771 aa12.36□□□□□ -0.43
CLCNKA-206ENST00000491433 IRF7Q92985 503 aa12.36□□□□□ -0.43
CLCNKA-206ENST00000491433 NAP1L4Q99733 375 aaKnown RBP12.36□□□□□ -0.43
CLCNKA-206ENST00000491433 NXF3Q9H4D5 531 aaKnown RBP12.36□□□□□ -0.43
CLCNKA-206ENST00000491433 ZSWIM4Q9H7M6 989 aa12.36□□□□□ -0.43
CLCNKA-206ENST00000491433 TRPV5Q9NQA5 729 aa12.36□□□□□ -0.43
CLCNKA-206ENST00000491433 HEBP1Q9NRV9 189 aa12.36□□□□□ -0.43
CLCNKA-206ENST00000491433 DNMT3BQ9UBC3 853 aaKnown RBP12.36□□□□□ -0.43
CLCNKA-206ENST00000491433 TENM4Q6N022 2769 aa12.36□□□□□ -0.43
CLCNKA-206ENST00000491433 TBX3O15119 743 aa12.35□□□□□ -0.43
CLCNKA-206ENST00000491433 MARCH6O60337 910 aa12.35□□□□□ -0.43
CLCNKA-206ENST00000491433 THP07101 528 aa12.35□□□□□ -0.43
CLCNKA-206ENST00000491433 GCFC2P16383 781 aaKnown RBP12.35□□□□□ -0.43
CLCNKA-206ENST00000491433 ARF4P18085 180 aaPredicted RBP12.35□□□□□ -0.43
CLCNKA-206ENST00000491433 SPIRE1Q08AE8 756 aa12.35□□□□□ -0.43
CLCNKA-206ENST00000491433 SIM2Q14190 667 aaPredicted RBP12.35□□□□□ -0.43
CLCNKA-206ENST00000491433 ADCK5Q3MIX3 580 aa12.35□□□□□ -0.43
CLCNKA-206ENST00000491433 PPP4R3AQ6IN85 833 aa12.35□□□□□ -0.43
CLCNKA-206ENST00000491433 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.35□□□□□ -0.43
CLCNKA-206ENST00000491433 Q6ZUG5 572 aa12.35□□□□□ -0.43
CLCNKA-206ENST00000491433 KRT25Q7Z3Z0 450 aa12.35□□□□□ -0.43
CLCNKA-206ENST00000491433 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.35□□□□□ -0.43
CLCNKA-206ENST00000491433 BLIDQ8IZY5 108 aa12.35□□□□□ -0.43
CLCNKA-206ENST00000491433 FBXL16Q8N461 479 aa12.35□□□□□ -0.43
CLCNKA-206ENST00000491433 C12orf50Q8NA57 414 aaPredicted RBP12.35□□□□□ -0.43
CLCNKA-206ENST00000491433 DAGLBQ8NCG7 672 aa12.35□□□□□ -0.43
CLCNKA-206ENST00000491433 GSTCDQ8NEC7 633 aa12.35□□□□□ -0.43
CLCNKA-206ENST00000491433 BRF1Q92994 677 aa12.35□□□□□ -0.43
CLCNKA-206ENST00000491433 MSANTD3Q96H12 275 aa12.35□□□□□ -0.43
CLCNKA-206ENST00000491433 PRIMPOLQ96LW4 560 aa12.35□□□□□ -0.43
CLCNKA-206ENST00000491433 CCDC43Q96MW1 224 aaKnown RBP12.35□□□□□ -0.43
CLCNKA-206ENST00000491433 LXNQ9BS40 222 aa12.35□□□□□ -0.43
CLCNKA-206ENST00000491433 SCNM1Q9BWG6 230 aa12.35□□□□□ -0.43
CLCNKA-206ENST00000491433 LSM14BQ9BX40 385 aaKnown RBP12.35□□□□□ -0.43
CLCNKA-206ENST00000491433 BRD9Q9H8M2 597 aa12.35□□□□□ -0.43
CLCNKA-206ENST00000491433 NOTCH4Q99466 2003 aa12.34□□□□□ -0.43
CLCNKA-206ENST00000491433 A0A1B0GUA9 196 aa12.34□□□□□ -0.43
CLCNKA-206ENST00000491433 EML1O00423 815 aa12.34□□□□□ -0.43
CLCNKA-206ENST00000491433 ZNF197O14709 1029 aa12.34□□□□□ -0.43
CLCNKA-206ENST00000491433 TRAPPC3O43617 180 aa12.34□□□□□ -0.43
CLCNKA-206ENST00000491433 DGAT1O75907 488 aa12.34□□□□□ -0.43
CLCNKA-206ENST00000491433 MICAL2O94851 1124 aa12.34□□□□□ -0.43
CLCNKA-206ENST00000491433 NPTXRO95502 500 aa12.34□□□□□ -0.43
CLCNKA-206ENST00000491433 LRG1P02750 347 aa12.34□□□□□ -0.43
CLCNKA-206ENST00000491433 TDGF1P13385 188 aa12.34□□□□□ -0.43
CLCNKA-206ENST00000491433 PTPN2P17706 415 aa12.34□□□□□ -0.43
CLCNKA-206ENST00000491433 AKAP5P24588 427 aa12.34□□□□□ -0.43
CLCNKA-206ENST00000491433 CXCL12P48061 93 aa12.34□□□□□ -0.43
CLCNKA-206ENST00000491433 MBTD1Q05BQ5 628 aa12.34□□□□□ -0.43
CLCNKA-206ENST00000491433 ZNF252P-AS1Q0IIN9 211 aa12.34□□□□□ -0.43
CLCNKA-206ENST00000491433 FZD5Q13467 585 aa12.34□□□□□ -0.43
CLCNKA-206ENST00000491433 NTRK3Q16288 839 aa12.34□□□□□ -0.43
CLCNKA-206ENST00000491433 COL28A1Q2UY09 1125 aa12.34□□□□□ -0.43
CLCNKA-206ENST00000491433 ZNF579Q8NAF0 562 aaKnown RBP12.34□□□□□ -0.43
CLCNKA-206ENST00000491433 MCRS1Q96EZ8 462 aa12.34□□□□□ -0.43
CLCNKA-206ENST00000491433 TRMT61BQ9BVS5 477 aaKnown RBP12.34□□□□□ -0.43
CLCNKA-206ENST00000491433 ZFP14Q9HCL3 533 aa12.34□□□□□ -0.43
CLCNKA-206ENST00000491433 BMP2KQ9NSY1 1161 aaPredicted RBP12.34□□□□□ -0.43
CLCNKA-206ENST00000491433 NDRG2Q9UN36 371 aaKnown RBP12.34□□□□□ -0.43
CLCNKA-206ENST00000491433 ADAMTS20P59510 1910 aa12.34□□□□□ -0.43
CLCNKA-206ENST00000491433 AKAP13Q12802 2813 aa12.33□□□□□ -0.44
CLCNKA-206ENST00000491433 DEXIO95424 95 aa12.33□□□□□ -0.44
CLCNKA-206ENST00000491433 BAG4O95429 457 aaKnown RBP12.33□□□□□ -0.44
CLCNKA-206ENST00000491433 RHOP08100 348 aa12.33□□□□□ -0.44
CLCNKA-206ENST00000491433 PLA2G2AP14555 144 aa12.33□□□□□ -0.44
CLCNKA-206ENST00000491433 ELF1P32519 619 aa12.33□□□□□ -0.44
CLCNKA-206ENST00000491433 OR1D2P34982 312 aa12.33□□□□□ -0.44
CLCNKA-206ENST00000491433 NOVA1P51513 510 aaKnown RBP12.33□□□□□ -0.44
CLCNKA-206ENST00000491433 MLLT6P55198 1093 aaPredicted RBP12.33□□□□□ -0.44
CLCNKA-206ENST00000491433 SSRP1Q08945 709 aaKnown RBP12.33□□□□□ -0.44
CLCNKA-206ENST00000491433 LRRC32Q14392 662 aa12.33□□□□□ -0.44
CLCNKA-206ENST00000491433 CCDC6Q16204 474 aa12.33□□□□□ -0.44
CLCNKA-206ENST00000491433 AMHR2Q16671 573 aa12.33□□□□□ -0.44
CLCNKA-206ENST00000491433 STPG1Q5TH74 334 aa12.33□□□□□ -0.44
CLCNKA-206ENST00000491433 BLOC1S2Q6QNY1 142 aa12.33□□□□□ -0.44
CLCNKA-206ENST00000491433 ING5Q8WYH8 240 aa12.33□□□□□ -0.44
CLCNKA-206ENST00000491433 FAM3CQ92520 227 aa12.33□□□□□ -0.44
CLCNKA-206ENST00000491433 LMAN1LQ9HAT1 526 aa12.33□□□□□ -0.44
CLCNKA-206ENST00000491433 KCNMB3Q9NPA1 279 aa12.33□□□□□ -0.44
CLCNKA-206ENST00000491433 PRMT7Q9NVM4 692 aaPredicted RBP12.33□□□□□ -0.44
CLCNKA-206ENST00000491433 HCFC1R1Q9NWW0 138 aa12.33□□□□□ -0.44
CLCNKA-206ENST00000491433 KLK14Q9P0G3 267 aa12.33□□□□□ -0.44
CLCNKA-206ENST00000491433 MTRRQ9UBK8 725 aa12.33□□□□□ -0.44
CLCNKA-206ENST00000491433 VAV3Q9UKW4 847 aa12.33□□□□□ -0.44
CLCNKA-206ENST00000491433 CCDC194A0A1B0GVG4 234 aa12.32□□□□□ -0.44
CLCNKA-206ENST00000491433 CASTOR2A6NHX0 329 aa12.32□□□□□ -0.44
CLCNKA-206ENST00000491433 TMEM189-UBE2V1I3L0A0 370 aa12.32□□□□□ -0.44
CLCNKA-206ENST00000491433 N4BP3O15049 544 aa12.32□□□□□ -0.44
CLCNKA-206ENST00000491433 MAP3K13O43283 966 aa12.32□□□□□ -0.44
CLCNKA-206ENST00000491433 KIF4AO95239 1232 aa12.32□□□□□ -0.44
CLCNKA-206ENST00000491433 CAPSQ13938 189 aa12.32□□□□□ -0.44
CLCNKA-206ENST00000491433 TANGO2Q6ICL3 276 aa12.32□□□□□ -0.44
CLCNKA-206ENST00000491433 CPLX2Q6PUV4 134 aaKnown RBP12.32□□□□□ -0.44
CLCNKA-206ENST00000491433 ANKS3Q6ZW76 656 aa12.32□□□□□ -0.44
CLCNKA-206ENST00000491433 NEK8Q86SG6 692 aa12.32□□□□□ -0.44
CLCNKA-206ENST00000491433 LONP2Q86WA8 852 aa12.32□□□□□ -0.44
CLCNKA-206ENST00000491433 SLFN12Q8IYM2 578 aa12.32□□□□□ -0.44
CLCNKA-206ENST00000491433 RASEFQ8IZ41 740 aa12.32□□□□□ -0.44
CLCNKA-206ENST00000491433 ELMOD1Q8N336 334 aa12.32□□□□□ -0.44
CLCNKA-206ENST00000491433 SPEM1Q8N4L4 309 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms