RNA–Protein interactions for RNA: ENST00000490814.6

BRD9-209, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,477 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-209ENST00000490814 SNX3O60493 162 aa10.82□□□□□ -0.68
BRD9-209ENST00000490814 SNHG28P0DPA3 235 aa10.82□□□□□ -0.68
BRD9-209ENST00000490814 MMP13P45452 471 aa10.82□□□□□ -0.68
BRD9-209ENST00000490814 BTG3Q14201 252 aaPredicted RBP10.82□□□□□ -0.68
BRD9-209ENST00000490814 UBAP2Q5T6F2 1119 aaKnown RBP10.82□□□□□ -0.68
BRD9-209ENST00000490814 RINT1Q6NUQ1 792 aa10.82□□□□□ -0.68
BRD9-209ENST00000490814 PPM1KQ8N3J5 372 aa10.82□□□□□ -0.68
BRD9-209ENST00000490814 FBF1Q8TES7 1133 aa10.82□□□□□ -0.68
BRD9-209ENST00000490814 CCDC127Q96BQ5 260 aa10.82□□□□□ -0.68
BRD9-209ENST00000490814 ANKRD27Q96NW4 1050 aa10.82□□□□□ -0.68
BRD9-209ENST00000490814 LBHD1Q9BQE6 289 aaPredicted RBP10.82□□□□□ -0.68
BRD9-209ENST00000490814 VCX3BQ9H321 246 aa10.82□□□□□ -0.68
BRD9-209ENST00000490814 VCX3AQ9NNX9 186 aa10.82□□□□□ -0.68
BRD9-209ENST00000490814 ASIC3Q9UHC3 531 aa10.82□□□□□ -0.68
BRD9-209ENST00000490814 TISP43B9A030 160 aa10.82□□□□□ -0.68
BRD9-209ENST00000490814 IL1R1P14778 569 aa10.82□□□□□ -0.68
BRD9-209ENST00000490814 PRKCIP41743 596 aa10.82□□□□□ -0.68
BRD9-209ENST00000490814 CALCOCO2Q13137 446 aa10.82□□□□□ -0.68
BRD9-209ENST00000490814 LONRF1Q17RB8 773 aa10.82□□□□□ -0.68
BRD9-209ENST00000490814 DCAF12L1Q5VU92 463 aa10.82□□□□□ -0.68
BRD9-209ENST00000490814 CIAPIN1Q6FI81 312 aa10.82□□□□□ -0.68
BRD9-209ENST00000490814 CERS5Q8N5B7 392 aa10.82□□□□□ -0.68
BRD9-209ENST00000490814 HES6Q96HZ4 224 aa10.82□□□□□ -0.68
BRD9-209ENST00000490814 MOV10L1Q9BXT6 1211 aaKnown RBP10.82□□□□□ -0.68
BRD9-209ENST00000490814 STMN4Q9H169 189 aaPredicted RBP10.82□□□□□ -0.68
BRD9-209ENST00000490814 GLT8D2Q9H1C3 349 aa10.82□□□□□ -0.68
BRD9-209ENST00000490814 UBAP1Q9NZ09 502 aa10.82□□□□□ -0.68
BRD9-209ENST00000490814 TBK1Q9UHD2 729 aa10.82□□□□□ -0.68
BRD9-209ENST00000490814 IRS2Q9Y4H2 1338 aa10.82□□□□□ -0.68
BRD9-209ENST00000490814 ARHGEF35A5YM69 484 aa10.82□□□□□ -0.68
BRD9-209ENST00000490814 GOLGA8IPA6NC78 632 aa10.82□□□□□ -0.68
BRD9-209ENST00000490814 GOLGA8JA6NMD2 632 aa10.82□□□□□ -0.68
BRD9-209ENST00000490814 K7ENM7 598 aa10.82□□□□□ -0.68
BRD9-209ENST00000490814 TGFB1I1O43294 461 aa10.82□□□□□ -0.68
BRD9-209ENST00000490814 YY1P25490 414 aa10.82□□□□□ -0.68
BRD9-209ENST00000490814 GABPAQ06546 454 aa10.82□□□□□ -0.68
BRD9-209ENST00000490814 CETN1Q12798 172 aa10.82□□□□□ -0.68
BRD9-209ENST00000490814 HYIQ5T013 277 aa10.82□□□□□ -0.68
BRD9-209ENST00000490814 CCDC137Q6PK04 289 aaKnown RBP10.82□□□□□ -0.68
BRD9-209ENST00000490814 FAM47EQ6ZV65 393 aa10.82□□□□□ -0.68
BRD9-209ENST00000490814 NCCRP1Q6ZVX7 275 aaPredicted RBP10.82□□□□□ -0.68
BRD9-209ENST00000490814 SMC1BQ8NDV3 1235 aa10.82□□□□□ -0.68
BRD9-209ENST00000490814 SUPT20HQ8NEM7 779 aa10.82□□□□□ -0.68
BRD9-209ENST00000490814 TRAPPC9Q96Q05 1148 aa10.82□□□□□ -0.68
BRD9-209ENST00000490814 RPS6KC1Q96S38 1066 aa10.82□□□□□ -0.68
BRD9-209ENST00000490814 STK33Q9BYT3 514 aa10.82□□□□□ -0.68
BRD9-209ENST00000490814 DLGAP2Q9P1A6 1054 aa10.82□□□□□ -0.68
BRD9-209ENST00000490814 KLHL14Q9P2G3 628 aa10.82□□□□□ -0.68
BRD9-209ENST00000490814 SYNPO2Q9UMS6 1093 aa10.82□□□□□ -0.68
BRD9-209ENST00000490814 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.81□□□□□ -0.68
BRD9-209ENST00000490814 GSTTP1A0A1W2PQM5 241 aa10.81□□□□□ -0.68
BRD9-209ENST00000490814 TMEM253P0C7T8 217 aa10.81□□□□□ -0.68
BRD9-209ENST00000490814 SP100P23497 879 aaPredicted RBP10.81□□□□□ -0.68
BRD9-209ENST00000490814 GBP1P32455 592 aa10.81□□□□□ -0.68
BRD9-209ENST00000490814 RFC5P40937 340 aa10.81□□□□□ -0.68
BRD9-209ENST00000490814 RAD23BP54727 409 aa10.81□□□□□ -0.68
BRD9-209ENST00000490814 PTENP60484 403 aa10.81□□□□□ -0.68
BRD9-209ENST00000490814 STXBP4Q6ZWJ1 553 aa10.81□□□□□ -0.68
BRD9-209ENST00000490814 ETNPPLQ8TBG4 499 aa10.81□□□□□ -0.68
BRD9-209ENST00000490814 LZICQ8WZA0 190 aa10.81□□□□□ -0.68
BRD9-209ENST00000490814 MRRFQ96E11 262 aaKnown RBP10.81□□□□□ -0.68
BRD9-209ENST00000490814 DDX23Q9BUQ8 820 aaKnown RBP10.81□□□□□ -0.68
BRD9-209ENST00000490814 PPP1R12CQ9BZL4 782 aa10.81□□□□□ -0.68
BRD9-209ENST00000490814 PCDH18Q9HCL0 1135 aa10.81□□□□□ -0.68
BRD9-209ENST00000490814 KIAA1551Q9HCM1 1747 aa10.81□□□□□ -0.68
BRD9-209ENST00000490814 hCG_2014768A0A024R1R8 64 aa10.81□□□□□ -0.68
BRD9-209ENST00000490814 EYA4O95677 639 aa10.81□□□□□ -0.68
BRD9-209ENST00000490814 AGTP01019 485 aa10.81□□□□□ -0.68
BRD9-209ENST00000490814 BCRP11274 1271 aa10.81□□□□□ -0.68
BRD9-209ENST00000490814 CREB1P16220 341 aa10.81□□□□□ -0.68
BRD9-209ENST00000490814 STX2P32856 288 aa10.81□□□□□ -0.68
BRD9-209ENST00000490814 ZNF365Q70YC5 407 aa10.81□□□□□ -0.68
BRD9-209ENST00000490814 INTS8Q75QN2 995 aaKnown RBP10.81□□□□□ -0.68
BRD9-209ENST00000490814 NANOGNBQ7Z5D8 188 aa10.81□□□□□ -0.68
BRD9-209ENST00000490814 APBB1IPQ7Z5R6 666 aaPredicted RBP10.81□□□□□ -0.68
BRD9-209ENST00000490814 CPNE8Q86YQ8 564 aa10.81□□□□□ -0.68
BRD9-209ENST00000490814 ARHGEF2Q92974 986 aaKnown RBP10.81□□□□□ -0.68
BRD9-209ENST00000490814 TRIM11Q96F44 468 aa10.81□□□□□ -0.68
BRD9-209ENST00000490814 ADAM7Q9H2U9 754 aa10.81□□□□□ -0.68
BRD9-209ENST00000490814 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.81□□□□□ -0.684e-7■□□□□ 10.2
BRD9-209ENST00000490814 APEX2Q9UBZ4 518 aa10.81□□□□□ -0.68
BRD9-209ENST00000490814 COG5Q9UP83 839 aa10.81□□□□□ -0.68
BRD9-209ENST00000490814 SCN7AQ01118 1682 aa10.81□□□□□ -0.68
BRD9-209ENST00000490814 GAKO14976 1311 aa10.81□□□□□ -0.68
BRD9-209ENST00000490814 MYH1P12882 1939 aa10.81□□□□□ -0.68
BRD9-209ENST00000490814 MYH4Q9Y623 1939 aa10.81□□□□□ -0.68
BRD9-209ENST00000490814 TMEM120BA0PK00 339 aa10.81□□□□□ -0.68
BRD9-209ENST00000490814 CES2O00748 559 aa10.81□□□□□ -0.68
BRD9-209ENST00000490814 SUPT3HO75486 399 aa10.81□□□□□ -0.68
BRD9-209ENST00000490814 ALADP13716 330 aa10.81□□□□□ -0.68
BRD9-209ENST00000490814 COMTP21964 271 aa10.81□□□□□ -0.68
BRD9-209ENST00000490814 HOXA7P31268 230 aaPredicted RBP10.81□□□□□ -0.68
BRD9-209ENST00000490814 RPL21P46778 160 aaKnown RBP10.81□□□□□ -0.68
BRD9-209ENST00000490814 USP46P62068 366 aa10.81□□□□□ -0.68
BRD9-209ENST00000490814 RNASELQ05823 741 aaKnown RBP10.81□□□□□ -0.68
BRD9-209ENST00000490814 KLC1Q07866 573 aa10.81□□□□□ -0.68
BRD9-209ENST00000490814 MAPK7Q13164 816 aa10.81□□□□□ -0.68
BRD9-209ENST00000490814 CNGA2Q16280 664 aa10.81□□□□□ -0.68
BRD9-209ENST00000490814 MAP7D1Q3KQU3 841 aa10.81□□□□□ -0.68
BRD9-209ENST00000490814 C1orf54Q8WWF1 131 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms