RNA–Protein interactions for RNA: ENST00000490716.5

SUPT20H-220, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 5

Gene SUPT20H, Length 3,811 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-220ENST00000490716 KCNB1Q14721 858 aa10.05□□□□□ -0.8
SUPT20H-220ENST00000490716 FOXR2Q6PJQ5 311 aa10.05□□□□□ -0.8
SUPT20H-220ENST00000490716 RPS6KC1Q96S38 1066 aa10.05□□□□□ -0.8
SUPT20H-220ENST00000490716 ADAM28Q9UKQ2 775 aa10.05□□□□□ -0.8
SUPT20H-220ENST00000490716 MTUS1Q9ULD2 1270 aa10.05□□□□□ -0.8
SUPT20H-220ENST00000490716 NME7Q9Y5B8 376 aa10.05□□□□□ -0.8
SUPT20H-220ENST00000490716 NRG2O14511 850 aaPredicted RBP10.04□□□□□ -0.8
SUPT20H-220ENST00000490716 OGTO15294 1046 aa10.04□□□□□ -0.8
SUPT20H-220ENST00000490716 POLR2DO15514 142 aaKnown RBP10.04□□□□□ -0.8
SUPT20H-220ENST00000490716 BMP6P22004 513 aa10.04□□□□□ -0.8
SUPT20H-220ENST00000490716 CASP1P29466 404 aa10.04□□□□□ -0.8
SUPT20H-220ENST00000490716 HSP90AA2PQ14568 343 aaPredicted RBP10.04□□□□□ -0.8
SUPT20H-220ENST00000490716 SMC1AQ14683 1233 aaKnown RBP10.04□□□□□ -0.8
SUPT20H-220ENST00000490716 SLC8B1Q6J4K2 584 aa10.04□□□□□ -0.8
SUPT20H-220ENST00000490716 FAM178BQ8IXR5 827 aa10.04□□□□□ -0.8
SUPT20H-220ENST00000490716 HPS3Q969F9 1004 aa10.04□□□□□ -0.8
SUPT20H-220ENST00000490716 CCDC39Q9UFE4 941 aa10.04□□□□□ -0.8
SUPT20H-220ENST00000490716 NT5C1B-RDH14C9J2C7 533 aa10.04□□□□□ -0.8
SUPT20H-220ENST00000490716 SPTLC1O15269 473 aa10.04□□□□□ -0.8
SUPT20H-220ENST00000490716 CNPP09543 421 aaKnown RBP10.04□□□□□ -0.8
SUPT20H-220ENST00000490716 CEBPZQ03701 1054 aaKnown RBP10.04□□□□□ -0.8
SUPT20H-220ENST00000490716 RAD51AP2Q09MP3 1159 aa10.04□□□□□ -0.8
SUPT20H-220ENST00000490716 KYAT1Q16773 422 aa10.04□□□□□ -0.8
SUPT20H-220ENST00000490716 C18orf25Q96B23 403 aaPredicted RBP10.04□□□□□ -0.8
SUPT20H-220ENST00000490716 MFSD14AQ96MC6 490 aa10.04□□□□□ -0.8
SUPT20H-220ENST00000490716 TIGD1Q96MW7 591 aa10.04□□□□□ -0.8
SUPT20H-220ENST00000490716 TCF25Q9BQ70 676 aa10.04□□□□□ -0.8
SUPT20H-220ENST00000490716 PRKAG3Q9UGI9 489 aa10.04□□□□□ -0.8
SUPT20H-220ENST00000490716 C2CD2Q9Y426 696 aa10.04□□□□□ -0.8
SUPT20H-220ENST00000490716 BACE2Q9Y5Z0 518 aa10.04□□□□□ -0.8
SUPT20H-220ENST00000490716 FANCMQ8IYD8 2048 aa10.04□□□□□ -0.8
SUPT20H-220ENST00000490716 LACTBL1A8MY62 500 aa10.04□□□□□ -0.8
SUPT20H-220ENST00000490716 CLTAP09496 248 aa10.04□□□□□ -0.8
SUPT20H-220ENST00000490716 RPL9P32969 192 aaKnown RBP10.04□□□□□ -0.8
SUPT20H-220ENST00000490716 SMAD4Q13485 552 aaKnown RBP10.04□□□□□ -0.8
SUPT20H-220ENST00000490716 PUS10Q3MIT2 529 aaKnown RBP10.04□□□□□ -0.8
SUPT20H-220ENST00000490716 DCLRE1AQ6PJP8 1040 aa10.04□□□□□ -0.8
SUPT20H-220ENST00000490716 IQUBQ8NA54 791 aa10.04□□□□□ -0.8
SUPT20H-220ENST00000490716 SUSD3Q96L08 255 aa10.04□□□□□ -0.8
SUPT20H-220ENST00000490716 AVENQ9NQS1 362 aaPredicted RBP10.04□□□□□ -0.8
SUPT20H-220ENST00000490716 PANK4Q9NVE7 773 aa10.04□□□□□ -0.8
SUPT20H-220ENST00000490716 MTRRQ9UBK8 725 aa10.04□□□□□ -0.8
SUPT20H-220ENST00000490716 TUBGCP4Q9UGJ1 667 aa10.04□□□□□ -0.8
SUPT20H-220ENST00000490716 SIX4Q9UIU6 781 aa10.04□□□□□ -0.8
SUPT20H-220ENST00000490716 OAZ2O95190 189 aa10.03□□□□□ -0.8
SUPT20H-220ENST00000490716 GRAMD1CQ8IYS0 662 aa10.03□□□□□ -0.8
SUPT20H-220ENST00000490716 SCAND2PQ9GZW5 306 aaPredicted RBP10.03□□□□□ -0.8
SUPT20H-220ENST00000490716 KLK14Q9P0G3 267 aa10.03□□□□□ -0.8
SUPT20H-220ENST00000490716 SERTAD1Q9UHV2 236 aa10.03□□□□□ -0.8
SUPT20H-220ENST00000490716 TRAF3IP3Q9Y228 551 aa10.03□□□□□ -0.8
SUPT20H-220ENST00000490716 HCFC2Q9Y5Z7 792 aa10.03□□□□□ -0.8
SUPT20H-220ENST00000490716 THP07101 528 aa10.03□□□□□ -0.8
SUPT20H-220ENST00000490716 STK4Q13043 487 aa10.03□□□□□ -0.8
SUPT20H-220ENST00000490716 FUT10Q6P4F1 479 aa10.03□□□□□ -0.8
SUPT20H-220ENST00000490716 KRBA2Q6ZNG9 492 aa10.03□□□□□ -0.8
SUPT20H-220ENST00000490716 RTL10Q7L3V2 364 aa10.03□□□□□ -0.8
SUPT20H-220ENST00000490716 DDX27Q96GQ7 796 aaKnown RBP10.03□□□□□ -0.8
SUPT20H-220ENST00000490716 LRRC3Q9BY71 257 aa10.03□□□□□ -0.8
SUPT20H-220ENST00000490716 GOLGA2P5Q9HBQ8 144 aa10.03□□□□□ -0.8
SUPT20H-220ENST00000490716 PI4K2BG5E9Z4 385 aa10.03□□□□□ -0.8
SUPT20H-220ENST00000490716 PPEF2O14830 753 aa10.03□□□□□ -0.8
SUPT20H-220ENST00000490716 ADAM12O43184 909 aa10.03□□□□□ -0.8
SUPT20H-220ENST00000490716 STAU1O95793 577 aaKnown RBP10.03□□□□□ -0.8
SUPT20H-220ENST00000490716 CXCL8P10145 99 aa10.03□□□□□ -0.8
SUPT20H-220ENST00000490716 STAT6P42226 847 aa10.03□□□□□ -0.8
SUPT20H-220ENST00000490716 STK38Q15208 465 aa10.03□□□□□ -0.8
SUPT20H-220ENST00000490716 CD302Q8IX05 232 aa10.03□□□□□ -0.8
SUPT20H-220ENST00000490716 VPS52Q8N1B4 723 aa10.03□□□□□ -0.8
SUPT20H-220ENST00000490716 ZNF516Q92618 1163 aa10.03□□□□□ -0.8
SUPT20H-220ENST00000490716 ASB7Q9H672 318 aa10.03□□□□□ -0.8
SUPT20H-220ENST00000490716 FBXW11Q9UKB1 542 aa10.03□□□□□ -0.8
SUPT20H-220ENST00000490716 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.03□□□□□ -0.8
SUPT20H-220ENST00000490716 ARHGEF37A1IGU5 675 aa10.02□□□□□ -0.8
SUPT20H-220ENST00000490716 MAPK13O15264 365 aa10.02□□□□□ -0.8
SUPT20H-220ENST00000490716 ALDH2P05091 517 aa10.02□□□□□ -0.8
SUPT20H-220ENST00000490716 ZNF568Q3ZCX4 644 aa10.02□□□□□ -0.8
SUPT20H-220ENST00000490716 NT5DC4Q86YG4 428 aa10.02□□□□□ -0.8
SUPT20H-220ENST00000490716 BRSK2Q8IWQ3 736 aa10.02□□□□□ -0.8
SUPT20H-220ENST00000490716 MYCT1Q8N699 235 aa10.02□□□□□ -0.8
SUPT20H-220ENST00000490716 URGCPQ8TCY9 931 aa10.02□□□□□ -0.8
SUPT20H-220ENST00000490716 TEX28O15482 410 aa10.02□□□□□ -0.81
SUPT20H-220ENST00000490716 N4BP1O75113 896 aaKnown RBP10.02□□□□□ -0.81
SUPT20H-220ENST00000490716 ZC3H11AO75152 810 aaKnown RBP eCLIP10.02□□□□□ -0.81
SUPT20H-220ENST00000490716 IL9P15248 144 aa10.02□□□□□ -0.81
SUPT20H-220ENST00000490716 PSMD2Q13200 908 aa10.02□□□□□ -0.81
SUPT20H-220ENST00000490716 MYBPC2Q14324 1141 aa10.02□□□□□ -0.81
SUPT20H-220ENST00000490716 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.02□□□□□ -0.81
SUPT20H-220ENST00000490716 DYMQ7RTS9 669 aa10.02□□□□□ -0.81
SUPT20H-220ENST00000490716 MED15Q96RN5 788 aa10.02□□□□□ -0.81
SUPT20H-220ENST00000490716 CBWD1Q9BRT8 395 aa10.02□□□□□ -0.81
SUPT20H-220ENST00000490716 ADAM7Q9H2U9 754 aa10.02□□□□□ -0.81
SUPT20H-220ENST00000490716 VRTNQ9H8Y1 702 aa10.02□□□□□ -0.81
SUPT20H-220ENST00000490716 A0A1B0GVL5 298 aa10.02□□□□□ -0.81
SUPT20H-220ENST00000490716 K7ENM7 598 aa10.02□□□□□ -0.81
SUPT20H-220ENST00000490716 HOXA9P31269 272 aa10.02□□□□□ -0.81
SUPT20H-220ENST00000490716 SMTNP53814 917 aa10.02□□□□□ -0.81
SUPT20H-220ENST00000490716 SEZ6Q53EL9 994 aa10.02□□□□□ -0.81
SUPT20H-220ENST00000490716 ACAP3Q96P50 834 aa10.02□□□□□ -0.81
SUPT20H-220ENST00000490716 PYM1Q9BRP8 204 aaKnown RBP10.02□□□□□ -0.81
SUPT20H-220ENST00000490716 FAN1Q9Y2M0 1017 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms