RNA–Protein interactions for RNA: ENST00000490696.5

VPS26A-207, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 800 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-207ENST00000490696 SLFN12LQ6IEE8 588 aa16.78■□□□□ 0.28
VPS26A-207ENST00000490696 FUT10Q6P4F1 479 aa16.78■□□□□ 0.28
VPS26A-207ENST00000490696 EP400NLQ6ZTU2 488 aa16.78■□□□□ 0.28
VPS26A-207ENST00000490696 UNC13DQ70J99 1090 aa16.78■□□□□ 0.28
VPS26A-207ENST00000490696 FSIP1Q8NA03 581 aa16.78■□□□□ 0.28
VPS26A-207ENST00000490696 GLIS3Q8NEA6 775 aa16.78■□□□□ 0.28
VPS26A-207ENST00000490696 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.78■□□□□ 0.28
VPS26A-207ENST00000490696 GPR62Q9BZJ7 368 aa16.78■□□□□ 0.28
VPS26A-207ENST00000490696 PLEKHA5Q9HAU0 1116 aa16.78■□□□□ 0.28
VPS26A-207ENST00000490696 SLC38A7Q9NVC3 462 aa16.78■□□□□ 0.28
VPS26A-207ENST00000490696 CLEC1BQ9P126 229 aa16.78■□□□□ 0.28
VPS26A-207ENST00000490696 CIZ1Q9ULV3 898 aaPredicted RBP16.78■□□□□ 0.28
VPS26A-207ENST00000490696 EXOC7Q9UPT5 735 aa16.78■□□□□ 0.28
VPS26A-207ENST00000490696 NCOR1O75376 2440 aa16.78■□□□□ 0.28
VPS26A-207ENST00000490696 PVALEFA0A1B0GWK0 134 aa16.77■□□□□ 0.28
VPS26A-207ENST00000490696 CLASP2O75122 1294 aaKnown RBP16.77■□□□□ 0.28
VPS26A-207ENST00000490696 PRPF6O94906 941 aaKnown RBP16.77■□□□□ 0.28
VPS26A-207ENST00000490696 ADRB2P07550 413 aa16.77■□□□□ 0.28
VPS26A-207ENST00000490696 IGFBP6P24592 240 aaPredicted RBP16.77■□□□□ 0.28
VPS26A-207ENST00000490696 ENOX2Q16206 610 aaKnown RBP16.77■□□□□ 0.28
VPS26A-207ENST00000490696 UPP1Q16831 310 aa16.77■□□□□ 0.28
VPS26A-207ENST00000490696 TMEM184AQ6ZMB5 413 aa16.77■□□□□ 0.28
VPS26A-207ENST00000490696 MSLNLQ96KJ4 702 aa16.77■□□□□ 0.28
VPS26A-207ENST00000490696 GOLPH3LQ9H4A5 285 aa16.77■□□□□ 0.28
VPS26A-207ENST00000490696 GOLGA2P5Q9HBQ8 144 aa16.77■□□□□ 0.28
VPS26A-207ENST00000490696 CHST7Q9NS84 486 aa16.77■□□□□ 0.28
VPS26A-207ENST00000490696 CPSF3Q9UKF6 684 aaKnown RBP16.77■□□□□ 0.28
VPS26A-207ENST00000490696 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.76■□□□□ 0.27
VPS26A-207ENST00000490696 TMEM189-UBE2V1I3L0A0 370 aa16.76■□□□□ 0.27
VPS26A-207ENST00000490696 TADA2AO75478 443 aa16.76■□□□□ 0.27
VPS26A-207ENST00000490696 URODP06132 367 aa16.76■□□□□ 0.27
VPS26A-207ENST00000490696 CA8P35219 290 aa16.76■□□□□ 0.27
VPS26A-207ENST00000490696 NDUFV1P49821 464 aa16.76■□□□□ 0.27
VPS26A-207ENST00000490696 CLCNKBP51801 687 aa16.76■□□□□ 0.27
VPS26A-207ENST00000490696 DSG1Q02413 1049 aa16.76■□□□□ 0.27
VPS26A-207ENST00000490696 FAM26FQ5R3K3 315 aa16.76■□□□□ 0.27
VPS26A-207ENST00000490696 KIAA0319Q5VV43 1072 aa16.76■□□□□ 0.27
VPS26A-207ENST00000490696 CD300LGQ6UXG3 332 aa16.76■□□□□ 0.27
VPS26A-207ENST00000490696 EPM2AIP1Q7L775 607 aaPredicted RBP16.76■□□□□ 0.27
VPS26A-207ENST00000490696 HASPINQ8TF76 798 aa16.76■□□□□ 0.27
VPS26A-207ENST00000490696 C18orf25Q96B23 403 aaPredicted RBP16.76■□□□□ 0.27
VPS26A-207ENST00000490696 UROC1Q96N76 676 aa16.76■□□□□ 0.27
VPS26A-207ENST00000490696 MRPL17Q9NRX2 175 aaKnown RBP16.76■□□□□ 0.27
VPS26A-207ENST00000490696 AGO2Q9UKV8 859 aaKnown RBP16.76■□□□□ 0.27
VPS26A-207ENST00000490696 BARX2Q9UMQ3 279 aaPredicted RBP16.76■□□□□ 0.27
VPS26A-207ENST00000490696 SF3B1O75533 1304 aaKnown RBP eCLIP16.75■□□□□ 0.27
VPS26A-207ENST00000490696 LACTBL1A8MY62 500 aa16.75■□□□□ 0.27
VPS26A-207ENST00000490696 EIF3DO15371 548 aaKnown RBP eCLIP16.75■□□□□ 0.27
VPS26A-207ENST00000490696 KLRC4O43908 158 aa16.75■□□□□ 0.27
VPS26A-207ENST00000490696 CNPP09543 421 aaKnown RBP16.75■□□□□ 0.27
VPS26A-207ENST00000490696 HOXD13P35453 343 aa16.75■□□□□ 0.27
VPS26A-207ENST00000490696 GLUD2P49448 558 aa16.75■□□□□ 0.27
VPS26A-207ENST00000490696 ACOT2P49753 483 aa16.75■□□□□ 0.27
VPS26A-207ENST00000490696 POSTNQ15063 836 aa16.75■□□□□ 0.27
VPS26A-207ENST00000490696 ZBTB6Q15916 424 aa16.75■□□□□ 0.27
VPS26A-207ENST00000490696 TPRNQ4KMQ1 711 aa16.75■□□□□ 0.27
VPS26A-207ENST00000490696 DCLRE1AQ6PJP8 1040 aa16.75■□□□□ 0.27
VPS26A-207ENST00000490696 STXBP4Q6ZWJ1 553 aa16.75■□□□□ 0.27
VPS26A-207ENST00000490696 GPR65Q8IYL9 337 aa16.75■□□□□ 0.27
VPS26A-207ENST00000490696 SYCP3Q8IZU3 236 aa16.75■□□□□ 0.27
VPS26A-207ENST00000490696 C3orf58Q8NDZ4 430 aa16.75■□□□□ 0.27
VPS26A-207ENST00000490696 POMGNT1Q8WZA1 660 aa16.75■□□□□ 0.27
VPS26A-207ENST00000490696 DDX27Q96GQ7 796 aaKnown RBP16.75■□□□□ 0.27
VPS26A-207ENST00000490696 B3GALT6Q96L58 329 aa16.75■□□□□ 0.27
VPS26A-207ENST00000490696 TMEM206Q9H813 350 aa16.75■□□□□ 0.27
VPS26A-207ENST00000490696 RPF1Q9H9Y2 349 aaKnown RBP16.75■□□□□ 0.27
VPS26A-207ENST00000490696 HCFC2Q9Y5Z7 792 aa16.75■□□□□ 0.27
VPS26A-207ENST00000490696 PDCD11Q14690 1871 aaKnown RBP16.75■□□□□ 0.27
VPS26A-207ENST00000490696 TCF20Q9UGU0 1960 aaKnown RBP16.75■□□□□ 0.27
VPS26A-207ENST00000490696 GRXCR2A6NFK2 248 aa16.74■□□□□ 0.27
VPS26A-207ENST00000490696 C2CD2LO14523 706 aa16.74■□□□□ 0.27
VPS26A-207ENST00000490696 B3GAT3O94766 335 aa16.74■□□□□ 0.27
VPS26A-207ENST00000490696 GARTP22102 1010 aa16.74■□□□□ 0.27
VPS26A-207ENST00000490696 RPL9P32969 192 aaKnown RBP16.74■□□□□ 0.27
VPS26A-207ENST00000490696 ANP32AP39687 249 aaKnown RBP16.74■□□□□ 0.27
VPS26A-207ENST00000490696 POU5F1Q01860 360 aaKnown RBP16.74■□□□□ 0.27
VPS26A-207ENST00000490696 PPP2R3AQ06190 1150 aa16.74■□□□□ 0.27
VPS26A-207ENST00000490696 SPAG1Q07617 926 aa16.74■□□□□ 0.27
VPS26A-207ENST00000490696 CLUL1Q15846 466 aa16.74■□□□□ 0.27
VPS26A-207ENST00000490696 USP41Q3LFD5 358 aa16.74■□□□□ 0.27
VPS26A-207ENST00000490696 PUS10Q3MIT2 529 aaKnown RBP16.74■□□□□ 0.27
VPS26A-207ENST00000490696 PTCRAQ6ISU1 281 aaPredicted RBP16.74■□□□□ 0.27
VPS26A-207ENST00000490696 CRELD2Q6UXH1 353 aaPredicted RBP16.74■□□□□ 0.27
VPS26A-207ENST00000490696 ZNF507Q8TCN5 953 aa16.74■□□□□ 0.27
VPS26A-207ENST00000490696 SLC22A17Q8WUG5 538 aa16.74■□□□□ 0.27
VPS26A-207ENST00000490696 KLHL5Q96PQ7 755 aa16.74■□□□□ 0.27
VPS26A-207ENST00000490696 EMILIN2Q9BXX0 1053 aa16.74■□□□□ 0.27
VPS26A-207ENST00000490696 RXFP1Q9HBX9 757 aa16.74■□□□□ 0.27
VPS26A-207ENST00000490696 TUBGCP4Q9UGJ1 667 aa16.74■□□□□ 0.27
VPS26A-207ENST00000490696 CD207Q9UJ71 328 aa16.74■□□□□ 0.27
VPS26A-207ENST00000490696 SSX2IPQ9Y2D8 614 aa16.74■□□□□ 0.27
VPS26A-207ENST00000490696 PODXLO00592 558 aa16.73■□□□□ 0.27
VPS26A-207ENST00000490696 ZNF202O95125 648 aa16.73■□□□□ 0.27
VPS26A-207ENST00000490696 MYL1P05976 194 aa16.73■□□□□ 0.27
VPS26A-207ENST00000490696 ELAVL2Q12926 359 aaKnown RBP16.73■□□□□ 0.27
VPS26A-207ENST00000490696 RTP2Q5QGT7 225 aa16.73■□□□□ 0.27
VPS26A-207ENST00000490696 FAM171A1Q5VUB5 890 aa16.73■□□□□ 0.27
VPS26A-207ENST00000490696 KIAA1841Q6NSI8 718 aa16.73■□□□□ 0.27
VPS26A-207ENST00000490696 LLGL2Q6P1M3 1020 aa16.73■□□□□ 0.27
VPS26A-207ENST00000490696 KRBA2Q6ZNG9 492 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms