RNA–Protein interactions for RNA: ENST00000489629.1

CPSF3-205, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 3

Gene CPSF3, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-205ENST00000489629 POLR2AP24928 1970 aaKnown RBP4.33□□□□□ -1.72
CPSF3-205ENST00000489629 MAST3O60307 1309 aa4.32□□□□□ -1.72
CPSF3-205ENST00000489629 SALL3Q9BXA9 1300 aa4.32□□□□□ -1.72
CPSF3-205ENST00000489629 A0A1B0GTW7 788 aa4.32□□□□□ -1.72
CPSF3-205ENST00000489629 K7ESF4 209 aa4.32□□□□□ -1.72
CPSF3-205ENST00000489629 GPR39O43194 453 aa4.32□□□□□ -1.72
CPSF3-205ENST00000489629 ESRRBO95718 433 aa4.32□□□□□ -1.72
CPSF3-205ENST00000489629 FOSP01100 380 aaPredicted RBP4.32□□□□□ -1.72
CPSF3-205ENST00000489629 POMCP01189 267 aa4.32□□□□□ -1.72
CPSF3-205ENST00000489629 ITGAMP11215 1152 aa4.32□□□□□ -1.72
CPSF3-205ENST00000489629 ATP5JP18859 108 aa4.32□□□□□ -1.72
CPSF3-205ENST00000489629 ALDH1A3P47895 512 aa4.32□□□□□ -1.72
CPSF3-205ENST00000489629 ERVK-21P61565 698 aa4.32□□□□□ -1.72
CPSF3-205ENST00000489629 MGAT2Q10469 447 aa4.32□□□□□ -1.72
CPSF3-205ENST00000489629 NOMO1Q15155 1222 aa4.32□□□□□ -1.72
CPSF3-205ENST00000489629 STRIP1Q5VSL9 837 aa4.32□□□□□ -1.72
CPSF3-205ENST00000489629 SEM1Q6ZVN7 128 aa4.32□□□□□ -1.72
CPSF3-205ENST00000489629 FAM98AQ8NCA5 519 aaKnown RBP4.32□□□□□ -1.72
CPSF3-205ENST00000489629 SIMC1Q8NDZ2 872 aa4.32□□□□□ -1.72
CPSF3-205ENST00000489629 OR2I1PQ8NGU4 316 aa4.32□□□□□ -1.72
CPSF3-205ENST00000489629 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.32□□□□□ -1.72
CPSF3-205ENST00000489629 AHCYL2Q96HN2 611 aaKnown RBP4.32□□□□□ -1.72
CPSF3-205ENST00000489629 BOD1Q96IK1 185 aa4.32□□□□□ -1.72
CPSF3-205ENST00000489629 MYOCQ99972 504 aa4.32□□□□□ -1.72
CPSF3-205ENST00000489629 ZSWIM1Q9BR11 485 aa4.32□□□□□ -1.72
CPSF3-205ENST00000489629 R3HDMLQ9H3Y0 253 aa4.32□□□□□ -1.72
CPSF3-205ENST00000489629 LDAHQ9H6V9 325 aa4.32□□□□□ -1.72
CPSF3-205ENST00000489629 FBXO34Q9NWN3 711 aa4.32□□□□□ -1.72
CPSF3-205ENST00000489629 PTGFRNQ9P2B2 879 aa4.32□□□□□ -1.72
CPSF3-205ENST00000489629 TNFRSF18Q9Y5U5 241 aa4.32□□□□□ -1.72
CPSF3-205ENST00000489629 COX11Q9Y6N1 276 aa4.32□□□□□ -1.72
CPSF3-205ENST00000489629 ENDOD1O94919 500 aa4.31□□□□□ -1.72
CPSF3-205ENST00000489629 RAP2AP10114 183 aa4.31□□□□□ -1.72
CPSF3-205ENST00000489629 GSPT1P15170 499 aaKnown RBP4.31□□□□□ -1.72
CPSF3-205ENST00000489629 POU3F3P20264 500 aaPredicted RBP4.31□□□□□ -1.72
CPSF3-205ENST00000489629 FGFR4P22455 802 aa4.31□□□□□ -1.72
CPSF3-205ENST00000489629 SLC6A2P23975 617 aa4.31□□□□□ -1.72
CPSF3-205ENST00000489629 PCSK1P29120 753 aa4.31□□□□□ -1.72
CPSF3-205ENST00000489629 PLA2G5P39877 138 aa4.31□□□□□ -1.72
CPSF3-205ENST00000489629 SLC5A3P53794 718 aa4.31□□□□□ -1.72
CPSF3-205ENST00000489629 PER3P56645 1201 aa4.31□□□□□ -1.72
CPSF3-205ENST00000489629 MXRA7P84157 204 aa4.31□□□□□ -1.72
CPSF3-205ENST00000489629 MPP3Q13368 585 aa4.31□□□□□ -1.72
CPSF3-205ENST00000489629 COLEC12Q5KU26 742 aa4.31□□□□□ -1.72
CPSF3-205ENST00000489629 NACC2Q96BF6 587 aa4.31□□□□□ -1.72
CPSF3-205ENST00000489629 ADI1Q9BV57 179 aa4.31□□□□□ -1.72
CPSF3-205ENST00000489629 ALOXE3Q9BYJ1 711 aa4.31□□□□□ -1.72
CPSF3-205ENST00000489629 SENP6Q9GZR1 1112 aaPredicted RBP4.31□□□□□ -1.72
CPSF3-205ENST00000489629 DNAJC28Q9NX36 388 aa4.31□□□□□ -1.72
CPSF3-205ENST00000489629 RNF181Q9P0P0 153 aa4.31□□□□□ -1.72
CPSF3-205ENST00000489629 AJAP1Q9UKB5 411 aaPredicted RBP4.31□□□□□ -1.72
CPSF3-205ENST00000489629 TMA7Q9Y2S6 64 aaKnown RBP4.31□□□□□ -1.72
CPSF3-205ENST00000489629 PCDHGA2Q9Y5H1 932 aa4.31□□□□□ -1.72
CPSF3-205ENST00000489629 ACTL7AQ9Y615 435 aa4.31□□□□□ -1.72
CPSF3-205ENST00000489629 AMY1AP04745 511 aa4.3□□□□□ -1.72
CPSF3-205ENST00000489629 CXADRP78310 365 aa4.3□□□□□ -1.72
CPSF3-205ENST00000489629 ATP8B2P98198 1209 aa4.3□□□□□ -1.72
CPSF3-205ENST00000489629 MTM1Q13496 603 aa4.3□□□□□ -1.72
CPSF3-205ENST00000489629 CYP2A13Q16696 494 aa4.3□□□□□ -1.72
CPSF3-205ENST00000489629 SPDYE7PQ495Y7 208 aa4.3□□□□□ -1.72
CPSF3-205ENST00000489629 CT47A1Q5JQC4 288 aaPredicted RBP4.3□□□□□ -1.72
CPSF3-205ENST00000489629 ZNF529Q6P280 563 aa4.3□□□□□ -1.72
CPSF3-205ENST00000489629 SYCE2Q6PIF2 218 aa4.3□□□□□ -1.72
CPSF3-205ENST00000489629 SPATS2Q86XZ4 545 aaKnown RBP4.3□□□□□ -1.72
CPSF3-205ENST00000489629 FAM43AQ8N2R8 423 aa4.3□□□□□ -1.72
CPSF3-205ENST00000489629 WDR66Q8TBY9 1149 aa4.3□□□□□ -1.72
CPSF3-205ENST00000489629 SLC9A6Q92581 669 aa4.3□□□□□ -1.72
CPSF3-205ENST00000489629 Q96MF0 132 aa4.3□□□□□ -1.72
CPSF3-205ENST00000489629 FAM126AQ9BYI3 521 aaPredicted RBP4.3□□□□□ -1.72
CPSF3-205ENST00000489629 REXO4Q9GZR2 422 aaKnown RBP4.3□□□□□ -1.72
CPSF3-205ENST00000489629 RNPEPQ9H4A4 650 aa4.3□□□□□ -1.72
CPSF3-205ENST00000489629 ZNF277Q9NRM2 450 aaPredicted RBP4.3□□□□□ -1.72
CPSF3-205ENST00000489629 TMEM140Q9NV12 185 aa4.3□□□□□ -1.72
CPSF3-205ENST00000489629 NOX1Q9Y5S8 564 aa4.3□□□□□ -1.72
CPSF3-205ENST00000489629 AATKQ6ZMQ8 1374 aa4.29□□□□□ -1.72
CPSF3-205ENST00000489629 CKBP12277 381 aa4.29□□□□□ -1.72
CPSF3-205ENST00000489629 OSMP13725 252 aa4.29□□□□□ -1.72
CPSF3-205ENST00000489629 CPEP16870 476 aa4.29□□□□□ -1.72
CPSF3-205ENST00000489629 AGXTP21549 392 aa4.29□□□□□ -1.72
CPSF3-205ENST00000489629 FDXRP22570 491 aa4.29□□□□□ -1.72
CPSF3-205ENST00000489629 CXCR5P32302 372 aa4.29□□□□□ -1.72
CPSF3-205ENST00000489629 IL12RB1P42701 662 aa4.29□□□□□ -1.72
CPSF3-205ENST00000489629 PTH2RP49190 550 aa4.29□□□□□ -1.72
CPSF3-205ENST00000489629 C21orf58P58505 322 aa4.29□□□□□ -1.72
CPSF3-205ENST00000489629 RD3Q7Z3Z2 195 aa4.29□□□□□ -1.72
CPSF3-205ENST00000489629 ZGPATQ8N5A5 531 aaKnown RBP4.29□□□□□ -1.72
CPSF3-205ENST00000489629 COG1Q8WTW3 980 aa4.29□□□□□ -1.72
CPSF3-205ENST00000489629 CYFIP2Q96F07 1278 aa4.29□□□□□ -1.72
CPSF3-205ENST00000489629 GALNT9Q9HCQ5 603 aa4.29□□□□□ -1.72
CPSF3-205ENST00000489629 USP35Q9P2H5 1018 aa4.29□□□□□ -1.72
CPSF3-205ENST00000489629 KCNE5Q9UJ90 142 aa4.29□□□□□ -1.72
CPSF3-205ENST00000489629 INSL6Q9Y581 213 aa4.29□□□□□ -1.72
CPSF3-205ENST00000489629 GPR45Q9Y5Y3 372 aa4.29□□□□□ -1.72
CPSF3-205ENST00000489629 PHLDB1Q86UU1 1377 aa4.28□□□□□ -1.72
CPSF3-205ENST00000489629 FAM171A2A8MVW0 826 aa4.28□□□□□ -1.72
CPSF3-205ENST00000489629 MASP2O00187 686 aa4.28□□□□□ -1.72
CPSF3-205ENST00000489629 TEX33O43247 280 aa4.28□□□□□ -1.72
CPSF3-205ENST00000489629 GPR32O75388 356 aa4.28□□□□□ -1.72
CPSF3-205ENST00000489629 ZFPL1O95159 310 aa4.28□□□□□ -1.72
CPSF3-205ENST00000489629 GPANK1O95872 356 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms