RNA–Protein interactions for RNA: ENST00000489453.1

CHKB-211, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 722 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-211ENST00000489453 RSPO2Q6UXX9 243 aaPredicted RBP11.43□□□□□ -0.58
CHKB-211ENST00000489453 ANKS3Q6ZW76 656 aa11.43□□□□□ -0.58
CHKB-211ENST00000489453 RTL10Q7L3V2 364 aa11.43□□□□□ -0.58
CHKB-211ENST00000489453 BSNDQ8WZ55 320 aa11.43□□□□□ -0.58
CHKB-211ENST00000489453 SECISBP2LQ93073 1101 aaKnown RBP11.43□□□□□ -0.58
CHKB-211ENST00000489453 KIFC3Q9BVG8 833 aa11.43□□□□□ -0.58
CHKB-211ENST00000489453 CCDC113Q9H0I3 377 aa11.43□□□□□ -0.58
CHKB-211ENST00000489453 HCFC1R1Q9NWW0 138 aa11.43□□□□□ -0.58
CHKB-211ENST00000489453 NCDNQ9UBB6 729 aa11.43□□□□□ -0.58
CHKB-211ENST00000489453 KCNH3Q9ULD8 1083 aa11.43□□□□□ -0.58
CHKB-211ENST00000489453 USP20Q9Y2K6 914 aa11.43□□□□□ -0.58
CHKB-211ENST00000489453 OTOGLQ3ZCN5 2332 aa11.43□□□□□ -0.58
CHKB-211ENST00000489453 RALGAPA1Q6GYQ0 2036 aa11.43□□□□□ -0.58
CHKB-211ENST00000489453 COL4A3Q01955 1670 aa11.43□□□□□ -0.58
CHKB-211ENST00000489453 DMXL1Q9Y485 3027 aa11.42□□□□□ -0.58
CHKB-211ENST00000489453 FAM170BA6NMN3 283 aa11.42□□□□□ -0.58
CHKB-211ENST00000489453 TMEM189-UBE2V1I3L0A0 370 aa11.42□□□□□ -0.58
CHKB-211ENST00000489453 SPTLC1O15269 473 aa11.42□□□□□ -0.58
CHKB-211ENST00000489453 NCAM2O15394 837 aa11.42□□□□□ -0.58
CHKB-211ENST00000489453 LARGE1O95461 756 aa11.42□□□□□ -0.58
CHKB-211ENST00000489453 GLULP15104 373 aa11.42□□□□□ -0.58
CHKB-211ENST00000489453 RPA1P27694 616 aa11.42□□□□□ -0.58
CHKB-211ENST00000489453 TKTP29401 623 aaKnown RBP11.42□□□□□ -0.58
CHKB-211ENST00000489453 CCT6AP40227 531 aaKnown RBP11.42□□□□□ -0.58
CHKB-211ENST00000489453 CLCNKBP51801 687 aa11.42□□□□□ -0.58
CHKB-211ENST00000489453 CSTF1Q05048 431 aaKnown RBP11.42□□□□□ -0.58
CHKB-211ENST00000489453 ORC2Q13416 577 aaPredicted RBP11.42□□□□□ -0.58
CHKB-211ENST00000489453 ZNF174Q15697 407 aa11.42□□□□□ -0.58
CHKB-211ENST00000489453 TPRG1Q6ZUI0 275 aa11.42□□□□□ -0.58
CHKB-211ENST00000489453 NPAS3Q8IXF0 933 aa11.42□□□□□ -0.58
CHKB-211ENST00000489453 ATRIPQ8WXE1 791 aa11.42□□□□□ -0.58
CHKB-211ENST00000489453 KIFAP3Q92845 792 aa11.42□□□□□ -0.58
CHKB-211ENST00000489453 RMDN1Q96DB5 314 aa11.42□□□□□ -0.58
CHKB-211ENST00000489453 MCRS1Q96EZ8 462 aa11.42□□□□□ -0.58
CHKB-211ENST00000489453 CCDC94Q9BW85 323 aaPredicted RBP11.42□□□□□ -0.58
CHKB-211ENST00000489453 OSBPL6Q9BZF3 934 aa11.42□□□□□ -0.58
CHKB-211ENST00000489453 LTB4R2Q9NPC1 389 aa11.42□□□□□ -0.58
CHKB-211ENST00000489453 TOPORSQ9NS56 1045 aaPredicted RBP11.42□□□□□ -0.58
CHKB-211ENST00000489453 DNMT3BQ9UBC3 853 aaKnown RBP11.42□□□□□ -0.58
CHKB-211ENST00000489453 FBXO4Q9UKT5 387 aa11.42□□□□□ -0.58
CHKB-211ENST00000489453 MRPS17Q9Y2R5 130 aaKnown RBP11.42□□□□□ -0.58
CHKB-211ENST00000489453 BACE2Q9Y5Z0 518 aa11.42□□□□□ -0.58
CHKB-211ENST00000489453 CCDC169A6NNP5 214 aa11.41□□□□□ -0.58
CHKB-211ENST00000489453 I3L4J1 428 aa11.41□□□□□ -0.58
CHKB-211ENST00000489453 K7ERI5 159 aa11.41□□□□□ -0.58
CHKB-211ENST00000489453 EIF5BO60841 1220 aaKnown RBP11.41□□□□□ -0.58
CHKB-211ENST00000489453 NEFLP07196 543 aa11.41□□□□□ -0.58
CHKB-211ENST00000489453 RHOP08100 348 aa11.41□□□□□ -0.58
CHKB-211ENST00000489453 MUTP22033 750 aa11.41□□□□□ -0.58
CHKB-211ENST00000489453 NEK4P51957 841 aa11.41□□□□□ -0.58
CHKB-211ENST00000489453 ARPP19P56211 112 aa11.41□□□□□ -0.58
CHKB-211ENST00000489453 PUM1Q14671 1186 aaKnown RBP eCLIP11.41□□□□□ -0.58
CHKB-211ENST00000489453 NAB2Q15742 525 aa11.41□□□□□ -0.58
CHKB-211ENST00000489453 ZNF528Q3MIS6 628 aa11.41□□□□□ -0.58
CHKB-211ENST00000489453 ZNF568Q3ZCX4 644 aa11.41□□□□□ -0.58
CHKB-211ENST00000489453 ZBTB41Q5SVQ8 909 aa11.41□□□□□ -0.58
CHKB-211ENST00000489453 ELMOD1Q8N336 334 aa11.41□□□□□ -0.58
CHKB-211ENST00000489453 DDX27Q96GQ7 796 aaKnown RBP11.41□□□□□ -0.58
CHKB-211ENST00000489453 BORCS6Q96GS4 357 aa11.41□□□□□ -0.58
CHKB-211ENST00000489453 C8orf76Q96K31 380 aa11.41□□□□□ -0.58
CHKB-211ENST00000489453 PPP1R10Q96QC0 940 aaKnown RBP11.41□□□□□ -0.58
CHKB-211ENST00000489453 DDX23Q9BUQ8 820 aaKnown RBP11.41□□□□□ -0.58
CHKB-211ENST00000489453 CXCL16Q9H2A7 254 aa11.41□□□□□ -0.58
CHKB-211ENST00000489453 SLC38A7Q9NVC3 462 aa11.41□□□□□ -0.58
CHKB-211ENST00000489453 GDE1Q9NZC3 331 aa11.41□□□□□ -0.58
CHKB-211ENST00000489453 NOL7Q9UMY1 257 aaKnown RBP11.41□□□□□ -0.58
CHKB-211ENST00000489453 PCDHGA2Q9Y5H1 932 aa11.41□□□□□ -0.58
CHKB-211ENST00000489453 PHLPP2Q6ZVD8 1323 aa11.4□□□□□ -0.58
CHKB-211ENST00000489453 H7C4K7 107 aa11.4□□□□□ -0.58
CHKB-211ENST00000489453 ECI2O75521 394 aa11.4□□□□□ -0.58
CHKB-211ENST00000489453 EDN1P05305 212 aa11.4□□□□□ -0.58
CHKB-211ENST00000489453 PTPN2P17706 415 aa11.4□□□□□ -0.58
CHKB-211ENST00000489453 CD72P21854 359 aa11.4□□□□□ -0.58
CHKB-211ENST00000489453 BRCC3P46736 316 aa11.4□□□□□ -0.58
CHKB-211ENST00000489453 OSTNP61366 133 aa11.4□□□□□ -0.58
CHKB-211ENST00000489453 DMP1Q13316 513 aaPredicted RBP11.4□□□□□ -0.58
CHKB-211ENST00000489453 UPP1Q16831 310 aa11.4□□□□□ -0.58
CHKB-211ENST00000489453 TTC38Q5R3I4 469 aa11.4□□□□□ -0.58
CHKB-211ENST00000489453 NT5DC1Q5TFE4 455 aa11.4□□□□□ -0.58
CHKB-211ENST00000489453 ZNF852Q6ZMS4 543 aa11.4□□□□□ -0.58
CHKB-211ENST00000489453 DCLK2Q8N568 766 aa11.4□□□□□ -0.58
CHKB-211ENST00000489453 NELL2Q99435 816 aa11.4□□□□□ -0.58
CHKB-211ENST00000489453 CORO1BQ9BR76 489 aa11.4□□□□□ -0.58
CHKB-211ENST00000489453 TCHPQ9BT92 498 aa11.4□□□□□ -0.58
CHKB-211ENST00000489453 MRPL4Q9BYD3 311 aaKnown RBP11.4□□□□□ -0.58
CHKB-211ENST00000489453 RAB34Q9BZG1 259 aa11.4□□□□□ -0.58
CHKB-211ENST00000489453 BHMT2Q9H2M3 363 aa11.4□□□□□ -0.58
CHKB-211ENST00000489453 GOLGA2P5Q9HBQ8 144 aa11.4□□□□□ -0.58
CHKB-211ENST00000489453 KIAA1024Q9UPX6 916 aa11.4□□□□□ -0.58
CHKB-211ENST00000489453 TNFSF13BQ9Y275 285 aa11.4□□□□□ -0.58
CHKB-211ENST00000489453 MTF2Q9Y483 593 aaPredicted RBP11.4□□□□□ -0.58
CHKB-211ENST00000489453 NUB1Q9Y5A7 615 aa11.4□□□□□ -0.58
CHKB-211ENST00000489453 STK24Q9Y6E0 443 aa11.4□□□□□ -0.58
CHKB-211ENST00000489453 FRYLO94915 3013 aa11.4□□□□□ -0.58
CHKB-211ENST00000489453 CACNA1AO00555 2505 aa11.4□□□□□ -0.59
CHKB-211ENST00000489453 CEP250Q9BV73 2442 aa11.39□□□□□ -0.59
CHKB-211ENST00000489453 SMIM28A0A1B0GU29 152 aa11.39□□□□□ -0.59
CHKB-211ENST00000489453 PODXLO00592 558 aa11.39□□□□□ -0.59
CHKB-211ENST00000489453 ZNF197O14709 1029 aa11.39□□□□□ -0.59
CHKB-211ENST00000489453 HARSP12081 509 aaKnown RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms