RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 PCDHA1Q9Y5I3 950 aa8.6□□□□□ -1.03
EXOSC3-206ENST00000489414 SLC4A4Q9Y6R1 1079 aa8.6□□□□□ -1.03
EXOSC3-206ENST00000489414 NRP1O14786 923 aa8.59□□□□□ -1.03
EXOSC3-206ENST00000489414 CHADO15335 359 aa8.59□□□□□ -1.03
EXOSC3-206ENST00000489414 DDHD2O94830 711 aa8.59□□□□□ -1.03
EXOSC3-206ENST00000489414 VIPR2P41587 438 aa8.59□□□□□ -1.03
EXOSC3-206ENST00000489414 AFMP43652 599 aa8.59□□□□□ -1.03
EXOSC3-206ENST00000489414 DMC1Q14565 340 aa8.59□□□□□ -1.03
EXOSC3-206ENST00000489414 TTF1Q15361 905 aaPredicted RBP8.59□□□□□ -1.03
EXOSC3-206ENST00000489414 SLFNL1Q499Z3 407 aa8.59□□□□□ -1.03
EXOSC3-206ENST00000489414 TMEM196Q5HYL7 178 aa8.59□□□□□ -1.03
EXOSC3-206ENST00000489414 PRSS36Q5K4E3 855 aa8.59□□□□□ -1.03
EXOSC3-206ENST00000489414 C1QL3Q5VWW1 255 aa8.59□□□□□ -1.03
EXOSC3-206ENST00000489414 FSTL4Q6MZW2 842 aa8.59□□□□□ -1.03
EXOSC3-206ENST00000489414 MTHFD1LQ6UB35 978 aa8.59□□□□□ -1.03
EXOSC3-206ENST00000489414 DHRS13Q6UX07 377 aa8.59□□□□□ -1.03
EXOSC3-206ENST00000489414 RABEPKQ7Z6M1 372 aa8.59□□□□□ -1.03
EXOSC3-206ENST00000489414 KIAA0319LQ8IZA0 1049 aa8.59□□□□□ -1.03
EXOSC3-206ENST00000489414 SETD7Q8WTS6 366 aaKnown RBP8.59□□□□□ -1.03
EXOSC3-206ENST00000489414 NAF1Q96HR8 494 aaKnown RBP8.59□□□□□ -1.03
EXOSC3-206ENST00000489414 TMEM209Q96SK2 561 aa8.59□□□□□ -1.03
EXOSC3-206ENST00000489414 TMEM175Q9BSA9 504 aa8.59□□□□□ -1.03
EXOSC3-206ENST00000489414 EPN3Q9H201 632 aa8.59□□□□□ -1.03
EXOSC3-206ENST00000489414 ZNF287Q9HBT7 754 aa8.59□□□□□ -1.03
EXOSC3-206ENST00000489414 STX8Q9UNK0 236 aa8.59□□□□□ -1.03
EXOSC3-206ENST00000489414 HDAC5Q9UQL6 1122 aa8.59□□□□□ -1.03
EXOSC3-206ENST00000489414 FAN1Q9Y2M0 1017 aa8.59□□□□□ -1.03
EXOSC3-206ENST00000489414 MYO16Q9Y6X6 1858 aa8.59□□□□□ -1.03
EXOSC3-206ENST00000489414 WDR27A2RRH5 827 aa8.58□□□□□ -1.04
EXOSC3-206ENST00000489414 WIPF3A6NGB9 483 aa8.58□□□□□ -1.04
EXOSC3-206ENST00000489414 SPATA31C2B4DYI2 1134 aa8.58□□□□□ -1.04
EXOSC3-206ENST00000489414 K7ENP7 123 aa8.58□□□□□ -1.04
EXOSC3-206ENST00000489414 ALDH2P05091 517 aa8.58□□□□□ -1.04
EXOSC3-206ENST00000489414 HSD17B4P51659 736 aa8.58□□□□□ -1.04
EXOSC3-206ENST00000489414 SLFN5Q08AF3 891 aa8.58□□□□□ -1.04
EXOSC3-206ENST00000489414 FCHO2Q0JRZ9 810 aa8.58□□□□□ -1.04
EXOSC3-206ENST00000489414 KIZQ2M2Z5 673 aa8.58□□□□□ -1.04
EXOSC3-206ENST00000489414 LINC00303Q3SY05 128 aa8.58□□□□□ -1.04
EXOSC3-206ENST00000489414 INO80CQ6PI98 192 aaPredicted RBP8.58□□□□□ -1.04
EXOSC3-206ENST00000489414 GLB1LQ6UWU2 654 aa8.58□□□□□ -1.04
EXOSC3-206ENST00000489414 XKR5Q6UX68 686 aa8.58□□□□□ -1.04
EXOSC3-206ENST00000489414 STOX1Q6ZVD7 989 aa8.58□□□□□ -1.04
EXOSC3-206ENST00000489414 ARID3BQ8IVW6 561 aaPredicted RBP8.58□□□□□ -1.04
EXOSC3-206ENST00000489414 OLIG1Q8TAK6 271 aa8.58□□□□□ -1.04
EXOSC3-206ENST00000489414 TTC8Q8TAM2 541 aa8.58□□□□□ -1.04
EXOSC3-206ENST00000489414 SLC7A14Q8TBB6 771 aa8.58□□□□□ -1.04
EXOSC3-206ENST00000489414 B3GALT6Q96L58 329 aa8.58□□□□□ -1.04
EXOSC3-206ENST00000489414 CNOT6LQ96LI5 555 aaKnown RBP8.58□□□□□ -1.04
EXOSC3-206ENST00000489414 SMARCAD1Q9H4L7 1026 aa8.58□□□□□ -1.04
EXOSC3-206ENST00000489414 TRPV4Q9HBA0 871 aa8.58□□□□□ -1.04
EXOSC3-206ENST00000489414 TMPRSS4Q9NRS4 437 aa8.58□□□□□ -1.04
EXOSC3-206ENST00000489414 GTSE1Q9NYZ3 720 aa8.58□□□□□ -1.04
EXOSC3-206ENST00000489414 INPP5FQ9Y2H2 1132 aa8.58□□□□□ -1.04
EXOSC3-206ENST00000489414 CCDC168Q8NDH2 2452 aa8.58□□□□□ -1.04
EXOSC3-206ENST00000489414 ANO9A1A5B4 782 aa8.57□□□□□ -1.04
EXOSC3-206ENST00000489414 MEIS3P2A8K0S8 358 aa8.57□□□□□ -1.04
EXOSC3-206ENST00000489414 HEPACAM2A8MVW5 462 aa8.57□□□□□ -1.04
EXOSC3-206ENST00000489414 GPR32O75388 356 aa8.57□□□□□ -1.04
EXOSC3-206ENST00000489414 OFD1O75665 1012 aa8.57□□□□□ -1.04
EXOSC3-206ENST00000489414 SKIP12755 728 aa8.57□□□□□ -1.04
EXOSC3-206ENST00000489414 COL8A1P27658 744 aa8.57□□□□□ -1.04
EXOSC3-206ENST00000489414 CCND2P30279 289 aa8.57□□□□□ -1.04
EXOSC3-206ENST00000489414 HNF1BP35680 557 aa8.57□□□□□ -1.04
EXOSC3-206ENST00000489414 PCBP4P57723 403 aaKnown RBP8.57□□□□□ -1.04
EXOSC3-206ENST00000489414 GHRHRQ02643 423 aa8.57□□□□□ -1.04
EXOSC3-206ENST00000489414 CREMQ03060 361 aa8.57□□□□□ -1.04
EXOSC3-206ENST00000489414 SRSF11Q05519 484 aaKnown RBP8.57□□□□□ -1.04
EXOSC3-206ENST00000489414 UVSSAQ2YD98 709 aa8.57□□□□□ -1.04
EXOSC3-206ENST00000489414 GNPTABQ3T906 1256 aa8.57□□□□□ -1.04
EXOSC3-206ENST00000489414 PPP4R3BQ5MIZ7 849 aa8.57□□□□□ -1.04
EXOSC3-206ENST00000489414 B4GALNT3Q6L9W6 998 aa8.57□□□□□ -1.04
EXOSC3-206ENST00000489414 DBX2Q6ZNG2 339 aa8.57□□□□□ -1.04
EXOSC3-206ENST00000489414 WDR63Q8IWG1 891 aa8.57□□□□□ -1.04
EXOSC3-206ENST00000489414 TSTD1Q8NFU3 115 aa8.57□□□□□ -1.04
EXOSC3-206ENST00000489414 TMC2Q8TDI7 906 aa8.57□□□□□ -1.04
EXOSC3-206ENST00000489414 LPPQ93052 612 aa8.57□□□□□ -1.04
EXOSC3-206ENST00000489414 ZSWIM3Q96MP5 696 aa8.57□□□□□ -1.04
EXOSC3-206ENST00000489414 INPP4AQ96PE3 977 aaPredicted RBP8.57□□□□□ -1.04
EXOSC3-206ENST00000489414 PPP1R16BQ96T49 567 aa8.57□□□□□ -1.04
EXOSC3-206ENST00000489414 GSTTP1A0A1W2PQM5 241 aa8.56□□□□□ -1.04
EXOSC3-206ENST00000489414 MINDY4BA8MYZ0 360 aa8.56□□□□□ -1.04
EXOSC3-206ENST00000489414 MICAL2O94851 1124 aa8.56□□□□□ -1.04
EXOSC3-206ENST00000489414 JUPP14923 745 aa8.56□□□□□ -1.04
EXOSC3-206ENST00000489414 P2RY2P41231 377 aa8.56□□□□□ -1.04
EXOSC3-206ENST00000489414 TFAP4Q01664 338 aa8.56□□□□□ -1.04
EXOSC3-206ENST00000489414 GRSF1Q12849 480 aaKnown RBP eCLIP8.56□□□□□ -1.04
EXOSC3-206ENST00000489414 MRPL50Q8N5N7 158 aaKnown RBP8.56□□□□□ -1.04
EXOSC3-206ENST00000489414 MDGA1Q8NFP4 955 aa8.56□□□□□ -1.04
EXOSC3-206ENST00000489414 RPLP0P6Q8NHW5 317 aa8.56□□□□□ -1.04
EXOSC3-206ENST00000489414 RSPRY1Q96DX4 576 aa8.56□□□□□ -1.04
EXOSC3-206ENST00000489414 TCEAL4Q96EI5 215 aa8.56□□□□□ -1.04
EXOSC3-206ENST00000489414 SEMA3CQ99985 751 aa8.56□□□□□ -1.04
EXOSC3-206ENST00000489414 SENP7Q9BQF6 1050 aa8.56□□□□□ -1.04
EXOSC3-206ENST00000489414 CLSTN3Q9BQT9 956 aa8.56□□□□□ -1.04
EXOSC3-206ENST00000489414 IL17RBQ9NRM6 502 aa8.56□□□□□ -1.04
EXOSC3-206ENST00000489414 DKK3Q9UBP4 350 aa8.56□□□□□ -1.04
EXOSC3-206ENST00000489414 MYH6P13533 1939 aa8.56□□□□□ -1.04
EXOSC3-206ENST00000489414 VPS37CA5D8V6 355 aaPredicted RBP8.55□□□□□ -1.04
EXOSC3-206ENST00000489414 OPLAHO14841 1288 aa8.55□□□□□ -1.04
EXOSC3-206ENST00000489414 FIBPO43427 364 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms