RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 PDXDC1Q6P996 788 aa16.81■□□□□ 0.28
UFD1-209ENST00000489406 PIP4P1Q86T03 277 aa16.81■□□□□ 0.28
UFD1-209ENST00000489406 CAMKK1Q8N5S9 505 aa16.81■□□□□ 0.28
UFD1-209ENST00000489406 IGDCC4Q8TDY8 1250 aa16.81■□□□□ 0.28
UFD1-209ENST00000489406 RSPRY1Q96DX4 576 aa16.81■□□□□ 0.28
UFD1-209ENST00000489406 HHIPQ96QV1 700 aa16.81■□□□□ 0.28
UFD1-209ENST00000489406 GTSE1Q9NYZ3 720 aa16.81■□□□□ 0.28
UFD1-209ENST00000489406 INVSQ9Y283 1065 aa16.81■□□□□ 0.28
UFD1-209ENST00000489406 CDY1Q9Y6F8 540 aa16.81■□□□□ 0.28
UFD1-209ENST00000489406 TK2O00142 265 aa16.8■□□□□ 0.28
UFD1-209ENST00000489406 CHADO15335 359 aa16.8■□□□□ 0.28
UFD1-209ENST00000489406 MAFO75444 373 aaPredicted RBP16.8■□□□□ 0.28
UFD1-209ENST00000489406 MICAL2O94851 1124 aa16.8■□□□□ 0.28
UFD1-209ENST00000489406 KIF4AO95239 1232 aa16.8■□□□□ 0.28
UFD1-209ENST00000489406 SRGAP2CP0DJJ0 459 aa16.8■□□□□ 0.28
UFD1-209ENST00000489406 GJA1P17302 382 aa16.8■□□□□ 0.28
UFD1-209ENST00000489406 AKAP5P24588 427 aa16.8■□□□□ 0.28
UFD1-209ENST00000489406 ADCY7P51828 1080 aa16.8■□□□□ 0.28
UFD1-209ENST00000489406 NAPAP54920 295 aa16.8■□□□□ 0.28
UFD1-209ENST00000489406 SPIRE1Q08AE8 756 aa16.8■□□□□ 0.28
UFD1-209ENST00000489406 GRIK3Q13003 919 aa16.8■□□□□ 0.28
UFD1-209ENST00000489406 KARSQ15046 597 aaKnown RBP16.8■□□□□ 0.28
UFD1-209ENST00000489406 WWC2Q6AWC2 1192 aa16.8■□□□□ 0.28
UFD1-209ENST00000489406 SRGAP1Q7Z6B7 1085 aa16.8■□□□□ 0.28
UFD1-209ENST00000489406 RALYLQ86SE5 291 aaKnown RBP16.8■□□□□ 0.28
UFD1-209ENST00000489406 NIFKQ9BYG3 293 aaKnown RBP16.8■□□□□ 0.28
UFD1-209ENST00000489406 TRPV4Q9HBA0 871 aa16.8■□□□□ 0.28
UFD1-209ENST00000489406 DIAPH3Q9NSV4 1193 aa16.8■□□□□ 0.28
UFD1-209ENST00000489406 SNTG2Q9NY99 539 aa16.8■□□□□ 0.28
UFD1-209ENST00000489406 KLK14Q9P0G3 267 aa16.8■□□□□ 0.28
UFD1-209ENST00000489406 GIT1Q9Y2X7 761 aa16.8■□□□□ 0.28
UFD1-209ENST00000489406 COL4A3BPQ9Y5P4 624 aa16.8■□□□□ 0.28
UFD1-209ENST00000489406 CCDC194A0A1B0GVG4 234 aa16.79■□□□□ 0.28
UFD1-209ENST00000489406 CASTOR2A6NHX0 329 aa16.79■□□□□ 0.28
UFD1-209ENST00000489406 J3QKU1 62 aa16.79■□□□□ 0.28
UFD1-209ENST00000489406 CHMP2AO43633 222 aa16.79■□□□□ 0.28
UFD1-209ENST00000489406 ATG13O75143 517 aa16.79■□□□□ 0.28
UFD1-209ENST00000489406 AP3B2Q13367 1082 aa16.79■□□□□ 0.28
UFD1-209ENST00000489406 ZNF423Q2M1K9 1284 aa16.79■□□□□ 0.28
UFD1-209ENST00000489406 CYP4A22Q5TCH4 519 aa16.79■□□□□ 0.28
UFD1-209ENST00000489406 CYP2U1Q7Z449 544 aa16.79■□□□□ 0.28
UFD1-209ENST00000489406 GPIHBP1Q8IV16 184 aa16.79■□□□□ 0.28
UFD1-209ENST00000489406 HS6ST3Q8IZP7 471 aa16.79■□□□□ 0.28
UFD1-209ENST00000489406 CPB2Q96IY4 423 aa16.79■□□□□ 0.28
UFD1-209ENST00000489406 NXF3Q9H4D5 531 aaKnown RBP16.79■□□□□ 0.28
UFD1-209ENST00000489406 URB1O60287 2271 aaKnown RBP16.79■□□□□ 0.28
UFD1-209ENST00000489406 SHROOM3Q8TF72 1996 aa16.78■□□□□ 0.28
UFD1-209ENST00000489406 ARHGEF37A1IGU5 675 aa16.78■□□□□ 0.28
UFD1-209ENST00000489406 PRRG1O14668 218 aa16.78■□□□□ 0.28
UFD1-209ENST00000489406 ARHGAP6O43182 974 aa16.78■□□□□ 0.28
UFD1-209ENST00000489406 MOSPD3O75425 235 aa16.78■□□□□ 0.28
UFD1-209ENST00000489406 ANTXR2P58335 489 aa16.78■□□□□ 0.28
UFD1-209ENST00000489406 SETQ01105 290 aaPredicted RBP16.78■□□□□ 0.28
UFD1-209ENST00000489406 LMAN2Q12907 356 aa16.78■□□□□ 0.28
UFD1-209ENST00000489406 SEMA3BQ13214 749 aa16.78■□□□□ 0.28
UFD1-209ENST00000489406 XKR3Q5GH77 459 aa16.78■□□□□ 0.28
UFD1-209ENST00000489406 JAKMIP3Q5VZ66 844 aa16.78■□□□□ 0.28
UFD1-209ENST00000489406 RAB11FIP4Q86YS3 637 aa16.78■□□□□ 0.28
UFD1-209ENST00000489406 PIGKQ92643 395 aa16.78■□□□□ 0.28
UFD1-209ENST00000489406 ZFYVE19Q96K21 471 aa16.78■□□□□ 0.28
UFD1-209ENST00000489406 MTRRQ9UBK8 725 aa16.78■□□□□ 0.28
UFD1-209ENST00000489406 ABCA7Q8IZY2 2146 aa16.78■□□□□ 0.28
UFD1-209ENST00000489406 SMCO2A6NFE2 343 aa16.77■□□□□ 0.28
UFD1-209ENST00000489406 ERLIN2O94905 339 aa16.77■□□□□ 0.28
UFD1-209ENST00000489406 STBD1O95210 358 aa16.77■□□□□ 0.28
UFD1-209ENST00000489406 CYP3A4P08684 503 aa16.77■□□□□ 0.28
UFD1-209ENST00000489406 CALM1P0DP23 149 aa16.77■□□□□ 0.28
UFD1-209ENST00000489406 CALM2P0DP24 149 aa16.77■□□□□ 0.28
UFD1-209ENST00000489406 CALM3P0DP25 149 aa16.77■□□□□ 0.28
UFD1-209ENST00000489406 MYL4P12829 197 aa16.77■□□□□ 0.28
UFD1-209ENST00000489406 ELF1P32519 619 aa16.77■□□□□ 0.28
UFD1-209ENST00000489406 FCHO2Q0JRZ9 810 aa16.77■□□□□ 0.28
UFD1-209ENST00000489406 PRR16Q569H4 304 aa16.77■□□□□ 0.28
UFD1-209ENST00000489406 PMS2CLQ68D20 193 aa16.77■□□□□ 0.28
UFD1-209ENST00000489406 CCNI2Q6ZMN8 369 aaPredicted RBP16.77■□□□□ 0.28
UFD1-209ENST00000489406 ZNF843Q8N446 348 aa16.77■□□□□ 0.28
UFD1-209ENST00000489406 NCOA7Q8NI08 942 aa16.77■□□□□ 0.28
UFD1-209ENST00000489406 PRPF31Q8WWY3 499 aaKnown RBP16.77■□□□□ 0.28
UFD1-209ENST00000489406 CRYGNQ8WXF5 182 aa16.77■□□□□ 0.28
UFD1-209ENST00000489406 E2F7Q96AV8 911 aa16.77■□□□□ 0.28
UFD1-209ENST00000489406 TRIM6Q9C030 488 aaPredicted RBP16.77■□□□□ 0.28
UFD1-209ENST00000489406 SLITRK6Q9H5Y7 841 aa16.77■□□□□ 0.28
UFD1-209ENST00000489406 TAF6LQ9Y6J9 622 aa16.77■□□□□ 0.28
UFD1-209ENST00000489406 VWA8A3KMH1 1905 aa16.76■□□□□ 0.27
UFD1-209ENST00000489406 ATG2BQ96BY7 2078 aa16.76■□□□□ 0.27
UFD1-209ENST00000489406 SPTA1P02549 2419 aa16.76■□□□□ 0.27
UFD1-209ENST00000489406 DDX11L8A8MPP1 907 aa16.76■□□□□ 0.27
UFD1-209ENST00000489406 CYP21A2P08686 494 aa16.76■□□□□ 0.27
UFD1-209ENST00000489406 CLK2P49760 499 aaKnown RBP16.76■□□□□ 0.27
UFD1-209ENST00000489406 ELAVL2Q12926 359 aaKnown RBP16.76■□□□□ 0.27
UFD1-209ENST00000489406 TUSC3Q13454 348 aa16.76■□□□□ 0.27
UFD1-209ENST00000489406 TEAD2Q15562 447 aa16.76■□□□□ 0.27
UFD1-209ENST00000489406 TRIM61Q5EBN2 209 aa16.76■□□□□ 0.27
UFD1-209ENST00000489406 NOTUMQ6P988 496 aa16.76■□□□□ 0.27
UFD1-209ENST00000489406 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.76■□□□□ 0.27
UFD1-209ENST00000489406 PLEKHM2Q8IWE5 1019 aa16.76■□□□□ 0.27
UFD1-209ENST00000489406 HACE1Q8IYU2 909 aa16.76■□□□□ 0.27
UFD1-209ENST00000489406 TMEM209Q96SK2 561 aa16.76■□□□□ 0.27
UFD1-209ENST00000489406 CSRNP2Q9H175 543 aa16.76■□□□□ 0.27
UFD1-209ENST00000489406 PARP2Q9UGN5 583 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms