RNA–Protein interactions for RNA: ENST00000489081.5

CMSS1-205, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 2 BASIC

Gene CMSS1, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-205ENST00000489081 CACTINQ8WUQ7 758 aaKnown RBP12.44□□□□□ -0.42
CMSS1-205ENST00000489081 SEMA4DQ92854 862 aa12.44□□□□□ -0.42
CMSS1-205ENST00000489081 SNX27Q96L92 541 aa12.44□□□□□ -0.42
CMSS1-205ENST00000489081 TRAIPQ9BWF2 469 aa12.44□□□□□ -0.42
CMSS1-205ENST00000489081 EDEM3Q9BZQ6 932 aa12.44□□□□□ -0.42
CMSS1-205ENST00000489081 HIPK3Q9H422 1215 aa12.44□□□□□ -0.42
CMSS1-205ENST00000489081 FAM105AQ9NUU6 356 aa12.44□□□□□ -0.42
CMSS1-205ENST00000489081 CEP72Q9P209 647 aa12.44□□□□□ -0.42
CMSS1-205ENST00000489081 TBX21Q9UL17 535 aa12.44□□□□□ -0.42
CMSS1-205ENST00000489081 ATP11BQ9Y2G3 1177 aa12.44□□□□□ -0.42
CMSS1-205ENST00000489081 PCDHB2Q9Y5E7 798 aa12.44□□□□□ -0.42
CMSS1-205ENST00000489081 UMODL1Q5DID0 1318 aa12.43□□□□□ -0.42
CMSS1-205ENST00000489081 NBNO60934 754 aa12.43□□□□□ -0.42
CMSS1-205ENST00000489081 LRRN2O75325 713 aa12.43□□□□□ -0.42
CMSS1-205ENST00000489081 VNN1O95497 513 aa12.43□□□□□ -0.42
CMSS1-205ENST00000489081 NFICP08651 508 aa12.43□□□□□ -0.42
CMSS1-205ENST00000489081 UCHL3P15374 230 aa12.43□□□□□ -0.42
CMSS1-205ENST00000489081 KRT9P35527 623 aa12.43□□□□□ -0.42
CMSS1-205ENST00000489081 YARSP54577 528 aaKnown RBP12.43□□□□□ -0.42
CMSS1-205ENST00000489081 POLR2FP61218 127 aaKnown RBP12.43□□□□□ -0.42
CMSS1-205ENST00000489081 ZBED6P86452 979 aa12.43□□□□□ -0.42
CMSS1-205ENST00000489081 BIRC3Q13489 604 aa12.43□□□□□ -0.42
CMSS1-205ENST00000489081 DUOXA2Q1HG44 320 aa12.43□□□□□ -0.42
CMSS1-205ENST00000489081 JADE1Q6IE81 842 aa12.43□□□□□ -0.42
CMSS1-205ENST00000489081 ALKAL1Q6UXT8 129 aa12.43□□□□□ -0.42
CMSS1-205ENST00000489081 TRAPPC11Q7Z392 1133 aa12.43□□□□□ -0.42
CMSS1-205ENST00000489081 UBE2Q1Q7Z7E8 422 aa12.43□□□□□ -0.42
CMSS1-205ENST00000489081 CNGA4Q8IV77 575 aa12.43□□□□□ -0.42
CMSS1-205ENST00000489081 LRRC8AQ8IWT6 810 aa12.43□□□□□ -0.42
CMSS1-205ENST00000489081 BAP1Q92560 729 aa12.43□□□□□ -0.42
CMSS1-205ENST00000489081 ANKRD36BP1Q96IX9 119 aa12.43□□□□□ -0.42
CMSS1-205ENST00000489081 ADAM2Q99965 735 aa12.43□□□□□ -0.42
CMSS1-205ENST00000489081 APOL6Q9BWW8 343 aa12.43□□□□□ -0.42
CMSS1-205ENST00000489081 IFIH1Q9BYX4 1025 aaKnown RBP12.43□□□□□ -0.42
CMSS1-205ENST00000489081 MTMR12Q9C0I1 747 aa12.43□□□□□ -0.42
CMSS1-205ENST00000489081 KCNF1Q9H3M0 494 aa12.43□□□□□ -0.42
CMSS1-205ENST00000489081 RAB20Q9NX57 234 aa12.43□□□□□ -0.42
CMSS1-205ENST00000489081 LUC7L2Q9Y383 392 aaKnown RBP12.43□□□□□ -0.42
CMSS1-205ENST00000489081 ZNF623O75123 536 aa12.42□□□□□ -0.42
CMSS1-205ENST00000489081 HLA-DRAP01903 254 aa12.42□□□□□ -0.42
CMSS1-205ENST00000489081 TMEM191BP0C7N4 346 aa12.42□□□□□ -0.42
CMSS1-205ENST00000489081 EN2P19622 333 aaPredicted RBP12.42□□□□□ -0.42
CMSS1-205ENST00000489081 AKAP5P24588 427 aa12.42□□□□□ -0.42
CMSS1-205ENST00000489081 PIK3CAP42336 1068 aa12.42□□□□□ -0.42
CMSS1-205ENST00000489081 RAB27AP51159 221 aa12.42□□□□□ -0.42
CMSS1-205ENST00000489081 TFAMQ00059 246 aaKnown RBP12.42□□□□□ -0.42
CMSS1-205ENST00000489081 LRMPQ12912 555 aa12.42□□□□□ -0.42
CMSS1-205ENST00000489081 PLEKHG4Q58EX7 1191 aa12.42□□□□□ -0.42
CMSS1-205ENST00000489081 XKR4Q5GH76 650 aa12.42□□□□□ -0.42
CMSS1-205ENST00000489081 GJB7Q6PEY0 223 aa12.42□□□□□ -0.42
CMSS1-205ENST00000489081 MRPL10Q7Z7H8 261 aaKnown RBP12.42□□□□□ -0.42
CMSS1-205ENST00000489081 NT5DC4Q86YG4 428 aa12.42□□□□□ -0.42
CMSS1-205ENST00000489081 HACE1Q8IYU2 909 aa12.42□□□□□ -0.42
CMSS1-205ENST00000489081 ZNF397Q8NF99 534 aaPredicted RBP12.42□□□□□ -0.42
CMSS1-205ENST00000489081 TRIM44Q96DX7 344 aaPredicted RBP12.42□□□□□ -0.42
CMSS1-205ENST00000489081 PANX2Q96RD6 677 aa12.42□□□□□ -0.42
CMSS1-205ENST00000489081 WNT8AQ9H1J5 351 aa12.42□□□□□ -0.42
CMSS1-205ENST00000489081 CXCL16Q9H2A7 254 aa12.42□□□□□ -0.42
CMSS1-205ENST00000489081 CNTN3Q9P232 1028 aa12.42□□□□□ -0.42
CMSS1-205ENST00000489081 APEX2Q9UBZ4 518 aa12.42□□□□□ -0.42
CMSS1-205ENST00000489081 PARP2Q9UGN5 583 aa12.42□□□□□ -0.42
CMSS1-205ENST00000489081 FBXL5Q9UKA1 691 aa12.42□□□□□ -0.42
CMSS1-205ENST00000489081 AJAP1Q9UKB5 411 aaPredicted RBP12.42□□□□□ -0.42
CMSS1-205ENST00000489081 DERAQ9Y315 318 aa12.42□□□□□ -0.42
CMSS1-205ENST00000489081 C2CD2Q9Y426 696 aa12.42□□□□□ -0.42
CMSS1-205ENST00000489081 DAAM1Q9Y4D1 1078 aa12.42□□□□□ -0.42
CMSS1-205ENST00000489081 FHOD1Q9Y613 1164 aa12.42□□□□□ -0.42
CMSS1-205ENST00000489081 A0A0U1RQF3 1178 aa12.41□□□□□ -0.42
CMSS1-205ENST00000489081 ZC3H11AO75152 810 aaKnown RBP eCLIP12.41□□□□□ -0.42
CMSS1-205ENST00000489081 PHACTR2O75167 634 aa12.41□□□□□ -0.42
CMSS1-205ENST00000489081 PARNO95453 639 aaKnown RBP12.41□□□□□ -0.42
CMSS1-205ENST00000489081 TNNC2P02585 160 aa12.41□□□□□ -0.42
CMSS1-205ENST00000489081 CLTBP09497 229 aa12.41□□□□□ -0.42
CMSS1-205ENST00000489081 ITGA4P13612 1032 aa12.41□□□□□ -0.42
CMSS1-205ENST00000489081 ATF7P17544 494 aaPredicted RBP12.41□□□□□ -0.42
CMSS1-205ENST00000489081 FECHP22830 423 aa12.41□□□□□ -0.42
CMSS1-205ENST00000489081 NCOA4Q13772 614 aa12.41□□□□□ -0.42
CMSS1-205ENST00000489081 TMEM132DQ14C87 1099 aa12.41□□□□□ -0.42
CMSS1-205ENST00000489081 ZBTB6Q15916 424 aa12.41□□□□□ -0.42
CMSS1-205ENST00000489081 SCARA3Q6AZY7 606 aa12.41□□□□□ -0.42
CMSS1-205ENST00000489081 IQCEQ6IPM2 695 aa12.41□□□□□ -0.42
CMSS1-205ENST00000489081 PHLDB3Q6NSJ2 640 aa12.41□□□□□ -0.42
CMSS1-205ENST00000489081 PDXDC1Q6P996 788 aa12.41□□□□□ -0.42
CMSS1-205ENST00000489081 FAM43BQ6ZT52 329 aaPredicted RBP12.41□□□□□ -0.42
CMSS1-205ENST00000489081 CACNA2D4Q7Z3S7 1137 aa12.41□□□□□ -0.42
CMSS1-205ENST00000489081 RTN4RL1Q86UN2 441 aaPredicted RBP12.41□□□□□ -0.42
CMSS1-205ENST00000489081 ARHGEF19Q8IW93 802 aa12.41□□□□□ -0.42
CMSS1-205ENST00000489081 C1orf127Q8N9H9 656 aa12.41□□□□□ -0.42
CMSS1-205ENST00000489081 DBF4BQ8NFT6 615 aa12.41□□□□□ -0.42
CMSS1-205ENST00000489081 OR8K1Q8NGG5 319 aa12.41□□□□□ -0.42
CMSS1-205ENST00000489081 LINC01599Q8WXQ3 324 aa12.41□□□□□ -0.42
CMSS1-205ENST00000489081 KIF12Q96FN5 646 aa12.41□□□□□ -0.42
CMSS1-205ENST00000489081 SCLYQ96I15 445 aa12.41□□□□□ -0.42
CMSS1-205ENST00000489081 ZNF830Q96NB3 372 aaPredicted RBP12.41□□□□□ -0.42
CMSS1-205ENST00000489081 ZMAT2Q96NC0 199 aaKnown RBP12.41□□□□□ -0.42
CMSS1-205ENST00000489081 NT5C1BQ96P26 610 aa12.41□□□□□ -0.42
CMSS1-205ENST00000489081 TSPAN18Q96SJ8 248 aa12.41□□□□□ -0.42
CMSS1-205ENST00000489081 DNAJC7Q99615 494 aa12.41□□□□□ -0.42
CMSS1-205ENST00000489081 PI4K2AQ9BTU6 479 aa12.41□□□□□ -0.42
CMSS1-205ENST00000489081 NAA15Q9BXJ9 866 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms