RNA–Protein interactions for RNA: ENST00000488961.5

BEST3-205, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-205ENST00000488961 INPP4AQ96PE3 977 aaPredicted RBP8.17□□□□□ -1.1
BEST3-205ENST00000488961 CCDC113Q9H0I3 377 aa8.17□□□□□ -1.1
BEST3-205ENST00000488961 AGO4Q9HCK5 861 aaKnown RBP8.17□□□□□ -1.1
BEST3-205ENST00000488961 LNPEPQ9UIQ6 1025 aa8.17□□□□□ -1.1
BEST3-205ENST00000488961 PLAAQ9Y263 795 aa8.17□□□□□ -1.1
BEST3-205ENST00000488961 USTQ9Y2C2 406 aa8.17□□□□□ -1.1
BEST3-205ENST00000488961 EVPLQ92817 2033 aa8.16□□□□□ -1.1
BEST3-205ENST00000488961 PIK3R2O00459 728 aa8.16□□□□□ -1.1
BEST3-205ENST00000488961 CREB3O43889 395 aa8.16□□□□□ -1.1
BEST3-205ENST00000488961 GNA14O95837 355 aa8.16□□□□□ -1.1
BEST3-205ENST00000488961 PPP1R2P41236 205 aa8.16□□□□□ -1.1
BEST3-205ENST00000488961 VAMP7P51809 220 aa8.16□□□□□ -1.1
BEST3-205ENST00000488961 CDK17Q00537 523 aa8.16□□□□□ -1.1
BEST3-205ENST00000488961 ZDHHC14Q8IZN3 488 aa8.16□□□□□ -1.1
BEST3-205ENST00000488961 OLIG1Q8TAK6 271 aa8.16□□□□□ -1.1
BEST3-205ENST00000488961 MDM1Q8TC05 714 aa8.16□□□□□ -1.1
BEST3-205ENST00000488961 ZFAND2BQ8WV99 257 aa8.16□□□□□ -1.1
BEST3-205ENST00000488961 PRCCQ92733 491 aaPredicted RBP8.16□□□□□ -1.1
BEST3-205ENST00000488961 TEPSINQ96N21 525 aa8.16□□□□□ -1.1
BEST3-205ENST00000488961 TMEM117Q9H0C3 514 aa8.16□□□□□ -1.1
BEST3-205ENST00000488961 WDR35Q9P2L0 1181 aa8.16□□□□□ -1.1
BEST3-205ENST00000488961 ZNF541Q9H0D2 1346 aa8.16□□□□□ -1.1
BEST3-205ENST00000488961 ZNFX1Q9P2E3 1918 aaKnown RBP8.16□□□□□ -1.1
BEST3-205ENST00000488961 COL11A1P12107 1806 aaPredicted RBP8.16□□□□□ -1.1
BEST3-205ENST00000488961 LRRD1A4D1F6 860 aa8.16□□□□□ -1.1
BEST3-205ENST00000488961 LIN7AO14910 233 aaPredicted RBP8.16□□□□□ -1.1
BEST3-205ENST00000488961 PJA2O43164 708 aa8.16□□□□□ -1.1
BEST3-205ENST00000488961 HSF2BPO75031 334 aa8.16□□□□□ -1.1
BEST3-205ENST00000488961 ICAM1P05362 532 aa8.16□□□□□ -1.1
BEST3-205ENST00000488961 PDHA1P08559 390 aa8.16□□□□□ -1.1
BEST3-205ENST00000488961 NR1D1P20393 614 aa8.16□□□□□ -1.1
BEST3-205ENST00000488961 MDH1P40925 334 aaKnown RBP8.16□□□□□ -1.1
BEST3-205ENST00000488961 PTGER2P43116 358 aa8.16□□□□□ -1.1
BEST3-205ENST00000488961 QARSP47897 775 aaKnown RBP8.16□□□□□ -1.1
BEST3-205ENST00000488961 PLTPP55058 493 aa8.16□□□□□ -1.1
BEST3-205ENST00000488961 PPP2R5CQ13362 524 aa8.16□□□□□ -1.1
BEST3-205ENST00000488961 ORC2Q13416 577 aaPredicted RBP8.16□□□□□ -1.1
BEST3-205ENST00000488961 BYSLQ13895 437 aaKnown RBP8.16□□□□□ -1.1
BEST3-205ENST00000488961 COBLL1Q53SF7 1204 aa8.16□□□□□ -1.1
BEST3-205ENST00000488961 CFAP58Q5T655 872 aa8.16□□□□□ -1.1
BEST3-205ENST00000488961 SCARA5Q6ZMJ2 495 aa8.16□□□□□ -1.1
BEST3-205ENST00000488961 KDM7AQ6ZMT4 941 aa8.16□□□□□ -1.1
BEST3-205ENST00000488961 FLAD1Q8NFF5 587 aa8.16□□□□□ -1.1
BEST3-205ENST00000488961 C1orf54Q8WWF1 131 aa8.16□□□□□ -1.1
BEST3-205ENST00000488961 CTNNBL1Q8WYA6 563 aaPredicted RBP8.16□□□□□ -1.1
BEST3-205ENST00000488961 KREMEN1Q96MU8 473 aa8.16□□□□□ -1.1
BEST3-205ENST00000488961 TAOK3Q9H2K8 898 aa8.16□□□□□ -1.1
BEST3-205ENST00000488961 C10orf88Q9H8K7 445 aa8.16□□□□□ -1.1
BEST3-205ENST00000488961 RHBDL2Q9NX52 303 aa8.16□□□□□ -1.1
BEST3-205ENST00000488961 GALNT8Q9NY28 637 aa8.16□□□□□ -1.1
BEST3-205ENST00000488961 APEX2Q9UBZ4 518 aa8.16□□□□□ -1.1
BEST3-205ENST00000488961 SUN2Q9UH99 717 aa8.16□□□□□ -1.1
BEST3-205ENST00000488961 FBXL5Q9UKA1 691 aa8.16□□□□□ -1.1
BEST3-205ENST00000488961 UMODL1Q5DID0 1318 aa8.16□□□□□ -1.1
BEST3-205ENST00000488961 GOLGA6L10A6NI86 522 aa8.16□□□□□ -1.1
BEST3-205ENST00000488961 LRRIQ4A6NIV6 560 aa8.16□□□□□ -1.1
BEST3-205ENST00000488961 SOCS7O14512 581 aa8.16□□□□□ -1.1
BEST3-205ENST00000488961 RGS20O76081 388 aa8.16□□□□□ -1.1
BEST3-205ENST00000488961 EDN1P05305 212 aa8.16□□□□□ -1.1
BEST3-205ENST00000488961 CD58P19256 250 aa8.16□□□□□ -1.1
BEST3-205ENST00000488961 NPTX2P47972 431 aa8.16□□□□□ -1.1
BEST3-205ENST00000488961 JAM2P57087 298 aa8.16□□□□□ -1.1
BEST3-205ENST00000488961 BIRC3Q13489 604 aa8.16□□□□□ -1.1
BEST3-205ENST00000488961 SNRNP35Q16560 246 aaKnown RBP8.16□□□□□ -1.1
BEST3-205ENST00000488961 ODF2Q5BJF6 829 aa8.16□□□□□ -1.1
BEST3-205ENST00000488961 TREML2Q5T2D2 321 aa8.16□□□□□ -1.1
BEST3-205ENST00000488961 SLC39A4Q6P5W5 647 aa8.16□□□□□ -1.1
BEST3-205ENST00000488961 ZNF662Q6ZS27 426 aa8.16□□□□□ -1.1
BEST3-205ENST00000488961 OTUD6AQ7L8S5 288 aa8.16□□□□□ -1.1
BEST3-205ENST00000488961 SDCCAG8Q86SQ7 713 aaPredicted RBP8.16□□□□□ -1.1
BEST3-205ENST00000488961 TMEM110Q86TL2 294 aa8.16□□□□□ -1.1
BEST3-205ENST00000488961 NT5DC3Q86UY8 548 aa8.16□□□□□ -1.1
BEST3-205ENST00000488961 ERICH1Q86X53 443 aa8.16□□□□□ -1.1
BEST3-205ENST00000488961 MMGT1Q8N4V1 131 aa8.16□□□□□ -1.1
BEST3-205ENST00000488961 LRRC57Q8N9N7 239 aa8.16□□□□□ -1.1
BEST3-205ENST00000488961 LRRN4Q8WUT4 740 aa8.16□□□□□ -1.1
BEST3-205ENST00000488961 HAUS1Q96CS2 278 aa8.16□□□□□ -1.1
BEST3-205ENST00000488961 FEM1BQ9UK73 627 aa8.16□□□□□ -1.1
BEST3-205ENST00000488961 ZNF510Q9Y2H8 683 aa8.16□□□□□ -1.1
BEST3-205ENST00000488961 PFASO15067 1338 aa8.16□□□□□ -1.1
BEST3-205ENST00000488961 FRMPD4Q14CM0 1322 aa8.16□□□□□ -1.1
BEST3-205ENST00000488961 ATRNL1Q5VV63 1379 aa8.15□□□□□ -1.1
BEST3-205ENST00000488961 DNAJC8O75937 253 aaPredicted RBP8.15□□□□□ -1.1
BEST3-205ENST00000488961 SHBGP04278 402 aa8.15□□□□□ -1.1
BEST3-205ENST00000488961 NR3C2P08235 984 aa8.15□□□□□ -1.1
BEST3-205ENST00000488961 TNNI1P19237 187 aa8.15□□□□□ -1.1
BEST3-205ENST00000488961 ALDH3A1P30838 453 aa8.15□□□□□ -1.1
BEST3-205ENST00000488961 MXI1P50539 228 aa8.15□□□□□ -1.1
BEST3-205ENST00000488961 TMEM132BQ14DG7 1078 aa8.15□□□□□ -1.1
BEST3-205ENST00000488961 TAF11Q15544 211 aa8.15□□□□□ -1.1
BEST3-205ENST00000488961 RNF220Q5VTB9 566 aa8.15□□□□□ -1.1
BEST3-205ENST00000488961 LRRC71Q8N4P6 559 aa8.15□□□□□ -1.1
BEST3-205ENST00000488961 CCDC63Q8NA47 563 aa8.15□□□□□ -1.1
BEST3-205ENST00000488961 SEC16BQ96JE7 1060 aa8.15□□□□□ -1.1
BEST3-205ENST00000488961 RPGRIP1Q96KN7 1286 aa8.15□□□□□ -1.1
BEST3-205ENST00000488961 SYT15Q9BQS2 421 aa8.15□□□□□ -1.1
BEST3-205ENST00000488961 PDCD2LQ9BRP1 358 aa8.15□□□□□ -1.1
BEST3-205ENST00000488961 PXMP2Q9NR77 195 aa8.15□□□□□ -1.1
BEST3-205ENST00000488961 GGA3Q9NZ52 723 aa8.15□□□□□ -1.1
BEST3-205ENST00000488961 PIM2Q9P1W9 311 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms