RNA–Protein interactions for RNA: ENST00000488927.2

HDAC7-224, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-224ENST00000488927 CETN3O15182 167 aa17.32■□□□□ 0.36
HDAC7-224ENST00000488927 MEFVO15553 781 aaPredicted RBP17.32■□□□□ 0.36
HDAC7-224ENST00000488927 RPL9P32969 192 aaKnown RBP17.32■□□□□ 0.36
HDAC7-224ENST00000488927 OR1G1P47890 313 aa17.32■□□□□ 0.36
HDAC7-224ENST00000488927 SLC11A1P49279 550 aa17.32■□□□□ 0.36
HDAC7-224ENST00000488927 NLRP12P59046 1061 aa17.32■□□□□ 0.36
HDAC7-224ENST00000488927 FKBP3Q00688 224 aaKnown RBP17.32■□□□□ 0.36
HDAC7-224ENST00000488927 PLCB3Q01970 1234 aa17.32■□□□□ 0.36
HDAC7-224ENST00000488927 UBE3AQ05086 875 aa17.32■□□□□ 0.36
HDAC7-224ENST00000488927 PAK1Q13153 545 aa17.32■□□□□ 0.36
HDAC7-224ENST00000488927 ADAM9Q13443 819 aa17.32■□□□□ 0.36
HDAC7-224ENST00000488927 TMEM132DQ14C87 1099 aa17.32■□□□□ 0.36
HDAC7-224ENST00000488927 NAB2Q15742 525 aa17.32■□□□□ 0.36
HDAC7-224ENST00000488927 CT47A1Q5JQC4 288 aaPredicted RBP17.32■□□□□ 0.36
HDAC7-224ENST00000488927 CBWD2Q8IUF1 395 aa17.32■□□□□ 0.36
HDAC7-224ENST00000488927 SLC39A11Q8N1S5 342 aa17.32■□□□□ 0.36
HDAC7-224ENST00000488927 BEST2Q8NFU1 509 aa17.32■□□□□ 0.36
HDAC7-224ENST00000488927 CACTINQ8WUQ7 758 aaKnown RBP17.32■□□□□ 0.36
HDAC7-224ENST00000488927 TMEM169Q96HH4 297 aa17.32■□□□□ 0.36
HDAC7-224ENST00000488927 CERS4Q9HA82 394 aa17.32■□□□□ 0.36
HDAC7-224ENST00000488927 DNAJB4Q9UDY4 337 aa17.32■□□□□ 0.36
HDAC7-224ENST00000488927 PUF60Q9UHX1 559 aaKnown RBP17.32■□□□□ 0.36
HDAC7-224ENST00000488927 LZTS1Q9Y250 596 aa17.32■□□□□ 0.36
HDAC7-224ENST00000488927 NRP1O14786 923 aa17.31■□□□□ 0.36
HDAC7-224ENST00000488927 LETM1O95202 739 aaPredicted RBP17.31■□□□□ 0.36
HDAC7-224ENST00000488927 CD44P16070 742 aaKnown RBP17.31■□□□□ 0.36
HDAC7-224ENST00000488927 CYP24A1Q07973 514 aa17.31■□□□□ 0.36
HDAC7-224ENST00000488927 GPM6BQ13491 265 aa17.31■□□□□ 0.36
HDAC7-224ENST00000488927 ZBTB6Q15916 424 aa17.31■□□□□ 0.36
HDAC7-224ENST00000488927 ANKRD40Q6AI12 368 aa17.31■□□□□ 0.36
HDAC7-224ENST00000488927 JADE1Q6IE81 842 aa17.31■□□□□ 0.36
HDAC7-224ENST00000488927 KLHL10Q6JEL2 608 aa17.31■□□□□ 0.36
HDAC7-224ENST00000488927 CAVIN1Q6NZI2 390 aaKnown RBP17.31■□□□□ 0.36
HDAC7-224ENST00000488927 SASS6Q6UVJ0 657 aa17.31■□□□□ 0.36
HDAC7-224ENST00000488927 KLHL23Q8NBE8 558 aa17.31■□□□□ 0.36
HDAC7-224ENST00000488927 RDH13Q8NBN7 331 aa17.31■□□□□ 0.36
HDAC7-224ENST00000488927 ZSWIM2Q8NEG5 633 aa17.31■□□□□ 0.36
HDAC7-224ENST00000488927 NELFBQ8WX92 580 aa17.31■□□□□ 0.36
HDAC7-224ENST00000488927 IGSF21Q96ID5 467 aa17.31■□□□□ 0.36
HDAC7-224ENST00000488927 MFSD14AQ96MC6 490 aa17.31■□□□□ 0.36
HDAC7-224ENST00000488927 FNBP1Q96RU3 617 aa17.31■□□□□ 0.36
HDAC7-224ENST00000488927 MKNK1Q9BUB5 465 aa17.31■□□□□ 0.36
HDAC7-224ENST00000488927 LMAN2LQ9H0V9 348 aa17.31■□□□□ 0.36
HDAC7-224ENST00000488927 CXCL16Q9H2A7 254 aa17.31■□□□□ 0.36
HDAC7-224ENST00000488927 TMEM63CQ9P1W3 806 aa17.31■□□□□ 0.36
HDAC7-224ENST00000488927 RALGAPA2Q2PPJ7 1873 aa17.31■□□□□ 0.36
HDAC7-224ENST00000488927 CASTOR2A6NHX0 329 aa17.3■□□□□ 0.36
HDAC7-224ENST00000488927 FGF18O76093 207 aa17.3■□□□□ 0.36
HDAC7-224ENST00000488927 PSMC2P35998 433 aaKnown RBP17.3■□□□□ 0.36
HDAC7-224ENST00000488927 ENPEPQ07075 957 aa17.3■□□□□ 0.36
HDAC7-224ENST00000488927 GRIN2CQ14957 1233 aa17.3■□□□□ 0.36
HDAC7-224ENST00000488927 PSMD6Q15008 389 aa17.3■□□□□ 0.36
HDAC7-224ENST00000488927 PTPROQ16827 1216 aa17.3■□□□□ 0.36
HDAC7-224ENST00000488927 SPATA1Q5VX52 437 aa17.3■□□□□ 0.36
HDAC7-224ENST00000488927 CEP135Q66GS9 1140 aa17.3■□□□□ 0.36
HDAC7-224ENST00000488927 DCLRE1AQ6PJP8 1040 aa17.3■□□□□ 0.36
HDAC7-224ENST00000488927 SPRED2Q7Z698 418 aa17.3■□□□□ 0.36
HDAC7-224ENST00000488927 DEFB123Q8N688 67 aa17.3■□□□□ 0.36
HDAC7-224ENST00000488927 LMCD1Q9NZU5 365 aa17.3■□□□□ 0.36
HDAC7-224ENST00000488927 RWDD2AQ9UIY3 292 aa17.3■□□□□ 0.36
HDAC7-224ENST00000488927 CTNND2Q9UQB3 1225 aa17.3■□□□□ 0.36
HDAC7-224ENST00000488927 CHD9Q3L8U1 2897 aa17.3■□□□□ 0.36
HDAC7-224ENST00000488927 TMEM189-UBE2V1I3L0A0 370 aa17.29■□□□□ 0.36
HDAC7-224ENST00000488927 SLC16A3O15427 465 aaKnown RBP17.29■□□□□ 0.36
HDAC7-224ENST00000488927 B4GALT3O60512 393 aa17.29■□□□□ 0.36
HDAC7-224ENST00000488927 FGFR1OPO95684 399 aaKnown RBP17.29■□□□□ 0.36
HDAC7-224ENST00000488927 ITGB1P05556 798 aa17.29■□□□□ 0.36
HDAC7-224ENST00000488927 NFICP08651 508 aa17.29■□□□□ 0.36
HDAC7-224ENST00000488927 EPB41P11171 864 aaKnown RBP17.29■□□□□ 0.36
HDAC7-224ENST00000488927 PAX3P23760 479 aa17.29■□□□□ 0.36
HDAC7-224ENST00000488927 ERCC5P28715 1186 aaPredicted RBP17.29■□□□□ 0.36
HDAC7-224ENST00000488927 LRPAP1P30533 357 aa17.29■□□□□ 0.36
HDAC7-224ENST00000488927 PBX3P40426 434 aa17.29■□□□□ 0.36
HDAC7-224ENST00000488927 AP3M2P53677 418 aa17.29■□□□□ 0.36
HDAC7-224ENST00000488927 SPAG1Q07617 926 aa17.29■□□□□ 0.36
HDAC7-224ENST00000488927 BMS1Q14692 1282 aaKnown RBP17.29■□□□□ 0.36
HDAC7-224ENST00000488927 UPP1Q16831 310 aa17.29■□□□□ 0.36
HDAC7-224ENST00000488927 INTS8Q75QN2 995 aaKnown RBP17.29■□□□□ 0.36
HDAC7-224ENST00000488927 WDR49Q8IV35 697 aa17.29■□□□□ 0.36
HDAC7-224ENST00000488927 ZC3H3Q8IXZ2 948 aaKnown RBP17.29■□□□□ 0.36
HDAC7-224ENST00000488927 C18orf25Q96B23 403 aaPredicted RBP17.29■□□□□ 0.36
HDAC7-224ENST00000488927 ANKRD36BP1Q96IX9 119 aa17.29■□□□□ 0.36
HDAC7-224ENST00000488927 CEP63Q96MT8 703 aa17.29■□□□□ 0.36
HDAC7-224ENST00000488927 GAS2L1Q99501 681 aaPredicted RBP17.29■□□□□ 0.36
HDAC7-224ENST00000488927 PDE11AQ9HCR9 933 aa17.29■□□□□ 0.36
HDAC7-224ENST00000488927 PRG3Q9Y2Y8 225 aaPredicted RBP17.29■□□□□ 0.36
HDAC7-224ENST00000488927 CITO14578 2027 aa17.28■□□□□ 0.36
HDAC7-224ENST00000488927 TRIM49BA6NDI0 452 aa17.28■□□□□ 0.36
HDAC7-224ENST00000488927 NT5C1B-RDH14C9J2C7 533 aa17.28■□□□□ 0.36
HDAC7-224ENST00000488927 PODXLO00592 558 aa17.28■□□□□ 0.36
HDAC7-224ENST00000488927 TRAPPC3O43617 180 aa17.28■□□□□ 0.36
HDAC7-224ENST00000488927 TADA2AO75478 443 aa17.28■□□□□ 0.36
HDAC7-224ENST00000488927 B3GAT3O94766 335 aa17.28■□□□□ 0.36
HDAC7-224ENST00000488927 TNNC2P02585 160 aa17.28■□□□□ 0.36
HDAC7-224ENST00000488927 TMEM191BP0C7N4 346 aa17.28■□□□□ 0.36
HDAC7-224ENST00000488927 KRT13P13646 458 aa17.28■□□□□ 0.36
HDAC7-224ENST00000488927 CLCNKBP51801 687 aa17.28■□□□□ 0.36
HDAC7-224ENST00000488927 PMS1P54277 932 aaKnown RBP17.28■□□□□ 0.36
HDAC7-224ENST00000488927 TFAMQ00059 246 aaKnown RBP17.28■□□□□ 0.36
HDAC7-224ENST00000488927 SOX4Q06945 474 aaPredicted RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms