RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 CXCL16Q9H2A7 254 aa21.01■□□□□ 0.95
CCM2-216ENST00000488727 TRAF3IP3Q9Y228 551 aa21.01■□□□□ 0.95
CCM2-216ENST00000488727 ANK1P16157 1881 aa21■□□□□ 0.95
CCM2-216ENST00000488727 AFF1P51825 1210 aaKnown RBP21■□□□□ 0.95
CCM2-216ENST00000488727 SNRPFP62306 86 aaKnown RBP21■□□□□ 0.95
CCM2-216ENST00000488727 TRIM65Q6PJ69 517 aa21■□□□□ 0.95
CCM2-216ENST00000488727 CNGA4Q8IV77 575 aa21■□□□□ 0.95
CCM2-216ENST00000488727 HELQQ8TDG4 1101 aa21■□□□□ 0.95
CCM2-216ENST00000488727 ZFP42Q96MM3 310 aa21■□□□□ 0.95
CCM2-216ENST00000488727 RSAD1Q9HA92 442 aa21■□□□□ 0.95
CCM2-216ENST00000488727 RNF216Q9NWF9 866 aaPredicted RBP21■□□□□ 0.95
CCM2-216ENST00000488727 PARP2Q9UGN5 583 aa21■□□□□ 0.95
CCM2-216ENST00000488727 RALGAPA2Q2PPJ7 1873 aa20.99■□□□□ 0.95
CCM2-216ENST00000488727 TDRD15B5MCY1 1934 aaKnown RBP20.99■□□□□ 0.95
CCM2-216ENST00000488727 A0A1W2PPC1 479 aa20.99■□□□□ 0.95
CCM2-216ENST00000488727 MLH1P40692 756 aa20.99■□□□□ 0.95
CCM2-216ENST00000488727 ACOT2P49753 483 aa20.99■□□□□ 0.95
CCM2-216ENST00000488727 CENPPQ6IPU0 288 aa20.99■□□□□ 0.95
CCM2-216ENST00000488727 TTI2Q6NXR4 508 aa20.99■□□□□ 0.95
CCM2-216ENST00000488727 CRELD2Q6UXH1 353 aaPredicted RBP20.99■□□□□ 0.95
CCM2-216ENST00000488727 IRF2BP1Q8IU81 584 aa20.99■□□□□ 0.95
CCM2-216ENST00000488727 C12orf56Q8IXR9 622 aa20.99■□□□□ 0.95
CCM2-216ENST00000488727 HACE1Q8IYU2 909 aa20.99■□□□□ 0.95
CCM2-216ENST00000488727 CASD1Q96PB1 797 aa20.99■□□□□ 0.95
CCM2-216ENST00000488727 ZBED2Q9BTP6 218 aa20.99■□□□□ 0.95
CCM2-216ENST00000488727 CCDC94Q9BW85 323 aaPredicted RBP20.99■□□□□ 0.95
CCM2-216ENST00000488727 HSPBP1Q9NZL4 362 aa20.99■□□□□ 0.95
CCM2-216ENST00000488727 KLK14Q9P0G3 267 aa20.99■□□□□ 0.95
CCM2-216ENST00000488727 CPSF3Q9UKF6 684 aaKnown RBP20.99■□□□□ 0.95
CCM2-216ENST00000488727 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.98■□□□□ 0.95
CCM2-216ENST00000488727 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.98■□□□□ 0.95
CCM2-216ENST00000488727 GOLGA8IPA6NC78 632 aa20.98■□□□□ 0.95
CCM2-216ENST00000488727 TRIM49BA6NDI0 452 aa20.98■□□□□ 0.95
CCM2-216ENST00000488727 GOLGA8JA6NMD2 632 aa20.98■□□□□ 0.95
CCM2-216ENST00000488727 MYOGP15173 224 aa20.98■□□□□ 0.95
CCM2-216ENST00000488727 PDCD11Q14690 1871 aaKnown RBP20.98■□□□□ 0.95
CCM2-216ENST00000488727 SYT10Q6XYQ8 523 aa20.98■□□□□ 0.95
CCM2-216ENST00000488727 GSTCDQ8NEC7 633 aa20.98■□□□□ 0.95
CCM2-216ENST00000488727 GOLGA5Q8TBA6 731 aa20.98■□□□□ 0.95
CCM2-216ENST00000488727 ACAP3Q96P50 834 aa20.98■□□□□ 0.95
CCM2-216ENST00000488727 YME1L1Q96TA2 773 aa20.98■□□□□ 0.95
CCM2-216ENST00000488727 GAD1Q99259 594 aa20.98■□□□□ 0.95
CCM2-216ENST00000488727 CGNQ9P2M7 1197 aaKnown RBP20.98■□□□□ 0.95
CCM2-216ENST00000488727 GIT1Q9Y2X7 761 aa20.98■□□□□ 0.95
CCM2-216ENST00000488727 BICDL2A1A5D9 508 aa20.98■□□□□ 0.95
CCM2-216ENST00000488727 ARL5CA6NH57 179 aa20.98■□□□□ 0.95
CCM2-216ENST00000488727 HOXA2O43364 376 aa20.98■□□□□ 0.95
CCM2-216ENST00000488727 TLL1O43897 1013 aa20.98■□□□□ 0.95
CCM2-216ENST00000488727 GYPCP04921 128 aa20.98■□□□□ 0.95
CCM2-216ENST00000488727 TPM1P09493 284 aa20.98■□□□□ 0.95
CCM2-216ENST00000488727 CLTAP09496 248 aa20.98■□□□□ 0.95
CCM2-216ENST00000488727 CXCL8P10145 99 aa20.98■□□□□ 0.95
CCM2-216ENST00000488727 CCNE1P24864 410 aa20.98■□□□□ 0.95
CCM2-216ENST00000488727 PBX2P40425 430 aa20.98■□□□□ 0.95
CCM2-216ENST00000488727 CYP2J2P51589 502 aa20.98■□□□□ 0.95
CCM2-216ENST00000488727 PAN2Q504Q3 1202 aaKnown RBP20.98■□□□□ 0.95
CCM2-216ENST00000488727 GLB1LQ6UWU2 654 aa20.98■□□□□ 0.95
CCM2-216ENST00000488727 P2RX5Q93086 422 aa20.98■□□□□ 0.95
CCM2-216ENST00000488727 RAD9AQ99638 391 aa20.98■□□□□ 0.95
CCM2-216ENST00000488727 FAM213AQ9BRX8 229 aa20.98■□□□□ 0.95
CCM2-216ENST00000488727 TMEM117Q9H0C3 514 aa20.98■□□□□ 0.95
CCM2-216ENST00000488727 TAB2Q9NYJ8 693 aa20.98■□□□□ 0.95
CCM2-216ENST00000488727 INPP5FQ9Y2H2 1132 aa20.98■□□□□ 0.95
CCM2-216ENST00000488727 LCHNA4D1U4 455 aa20.97■□□□□ 0.95
CCM2-216ENST00000488727 TBKBP1A7MCY6 615 aa20.97■□□□□ 0.95
CCM2-216ENST00000488727 INPPL1O15357 1258 aa20.97■□□□□ 0.95
CCM2-216ENST00000488727 NR3C1P04150 777 aa20.97■□□□□ 0.95
CCM2-216ENST00000488727 ENOX2Q16206 610 aaKnown RBP20.97■□□□□ 0.95
CCM2-216ENST00000488727 SLC10A6Q3KNW5 377 aa20.97■□□□□ 0.95
CCM2-216ENST00000488727 ANKRD40Q6AI12 368 aa20.97■□□□□ 0.95
CCM2-216ENST00000488727 GPD1LQ8N335 351 aa20.97■□□□□ 0.95
CCM2-216ENST00000488727 TMEM174Q8WUU8 243 aa20.97■□□□□ 0.95
CCM2-216ENST00000488727 PBX4Q9BYU1 374 aa20.97■□□□□ 0.95
CCM2-216ENST00000488727 UBN1Q9NPG3 1134 aa20.97■□□□□ 0.95
CCM2-216ENST00000488727 DMAC2Q9NW81 257 aa20.97■□□□□ 0.95
CCM2-216ENST00000488727 MIOSQ9NXC5 875 aa20.97■□□□□ 0.95
CCM2-216ENST00000488727 HCSTQ9UBK5 93 aa20.97■□□□□ 0.95
CCM2-216ENST00000488727 YBX2Q9Y2T7 364 aaKnown RBP20.97■□□□□ 0.95
CCM2-216ENST00000488727 INSL6Q9Y581 213 aa20.97■□□□□ 0.95
CCM2-216ENST00000488727 KIAA1671Q9BY89 1806 aa20.97■□□□□ 0.95
CCM2-216ENST00000488727 A0A1W2PQC6 194 aa20.96■□□□□ 0.95
CCM2-216ENST00000488727 CALUO43852 315 aaPredicted RBP20.96■□□□□ 0.95
CCM2-216ENST00000488727 EXTL3O43909 919 aa20.96■□□□□ 0.95
CCM2-216ENST00000488727 SLU7O95391 586 aaKnown RBP20.96■□□□□ 0.95
CCM2-216ENST00000488727 ALKAL1Q6UXT8 129 aa20.96■□□□□ 0.95
CCM2-216ENST00000488727 ABI1Q8IZP0 508 aa20.96■□□□□ 0.95
CCM2-216ENST00000488727 SNX27Q96L92 541 aa20.96■□□□□ 0.95
CCM2-216ENST00000488727 FBXL18Q96ME1 805 aa20.96■□□□□ 0.95
CCM2-216ENST00000488727 PLAGL2Q9UPG8 496 aa20.96■□□□□ 0.95
CCM2-216ENST00000488727 LGALS16A8MUM7 142 aa20.95■□□□□ 0.94
CCM2-216ENST00000488727 PTGESO14684 152 aa20.95■□□□□ 0.94
CCM2-216ENST00000488727 KIAA0391O15091 583 aaKnown RBP20.95■□□□□ 0.94
CCM2-216ENST00000488727 LDHAP00338 332 aaKnown RBP20.95■□□□□ 0.94
CCM2-216ENST00000488727 SCNN1GP51170 649 aa20.95■□□□□ 0.94
CCM2-216ENST00000488727 YARSP54577 528 aaKnown RBP20.95■□□□□ 0.94
CCM2-216ENST00000488727 NFIL3Q16649 462 aa20.95■□□□□ 0.94
CCM2-216ENST00000488727 KYAT1Q16773 422 aa20.95■□□□□ 0.94
CCM2-216ENST00000488727 EDRF1Q3B7T1 1238 aa20.95■□□□□ 0.94
CCM2-216ENST00000488727 LRIT3Q3SXY7 679 aa20.95■□□□□ 0.94
CCM2-216ENST00000488727 NOMO2Q5JPE7 1267 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms