RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 TMEM63CQ9P1W3 806 aa12.01□□□□□ -0.49
UBE4B-210ENST00000488228 PCDHB12Q9Y5F1 795 aa12.01□□□□□ -0.49
UBE4B-210ENST00000488228 BRWD1Q9NSI6 2320 aa12.01□□□□□ -0.49
UBE4B-210ENST00000488228 PTPRJQ12913 1337 aa12.01□□□□□ -0.49
UBE4B-210ENST00000488228 C5orf67F2Z3F1 127 aa12□□□□□ -0.49
UBE4B-210ENST00000488228 KIAA0391O15091 583 aaKnown RBP12□□□□□ -0.49
UBE4B-210ENST00000488228 GRM6O15303 877 aa12□□□□□ -0.49
UBE4B-210ENST00000488228 CALUO43852 315 aaPredicted RBP12□□□□□ -0.49
UBE4B-210ENST00000488228 EXOC3O60645 756 aa12□□□□□ -0.49
UBE4B-210ENST00000488228 LPXNO60711 386 aa12□□□□□ -0.49
UBE4B-210ENST00000488228 FGF18O76093 207 aa12□□□□□ -0.49
UBE4B-210ENST00000488228 KIF4AO95239 1232 aa12□□□□□ -0.49
UBE4B-210ENST00000488228 GALTP07902 379 aa12□□□□□ -0.49
UBE4B-210ENST00000488228 NR2F2P24468 414 aa12□□□□□ -0.49
UBE4B-210ENST00000488228 PPM1AP35813 382 aa12□□□□□ -0.49
UBE4B-210ENST00000488228 ALDH7A1P49419 539 aaKnown RBP12□□□□□ -0.49
UBE4B-210ENST00000488228 CASP4P49662 377 aa12□□□□□ -0.49
UBE4B-210ENST00000488228 SNRPFP62306 86 aaKnown RBP12□□□□□ -0.49
UBE4B-210ENST00000488228 GPM6BQ13491 265 aa12□□□□□ -0.49
UBE4B-210ENST00000488228 TMEM132DQ14C87 1099 aa12□□□□□ -0.49
UBE4B-210ENST00000488228 DPCR1Q3MIW9 517 aa12□□□□□ -0.49
UBE4B-210ENST00000488228 COBLL1Q53SF7 1204 aa12□□□□□ -0.49
UBE4B-210ENST00000488228 CCDC183Q5T5S1 534 aa12□□□□□ -0.49
UBE4B-210ENST00000488228 LMBRD2Q68DH5 695 aaPredicted RBP12□□□□□ -0.49
UBE4B-210ENST00000488228 CAVIN1Q6NZI2 390 aaKnown RBP12□□□□□ -0.49
UBE4B-210ENST00000488228 TRIML1Q8N9V2 468 aa12□□□□□ -0.49
UBE4B-210ENST00000488228 RDH13Q8NBN7 331 aa12□□□□□ -0.49
UBE4B-210ENST00000488228 HASPINQ8TF76 798 aa12□□□□□ -0.49
UBE4B-210ENST00000488228 MYLIPQ8WY64 445 aa12□□□□□ -0.49
UBE4B-210ENST00000488228 EEF2KMTQ96G04 330 aa12□□□□□ -0.49
UBE4B-210ENST00000488228 FBXL18Q96ME1 805 aa12□□□□□ -0.49
UBE4B-210ENST00000488228 TMEM175Q9BSA9 504 aa12□□□□□ -0.49
UBE4B-210ENST00000488228 VN1R3Q9BXE9 311 aa12□□□□□ -0.49
UBE4B-210ENST00000488228 PDE11AQ9HCR9 933 aa12□□□□□ -0.49
UBE4B-210ENST00000488228 CGNQ9P2M7 1197 aaKnown RBP12□□□□□ -0.49
UBE4B-210ENST00000488228 TRAF3IP3Q9Y228 551 aa12□□□□□ -0.49
UBE4B-210ENST00000488228 PPP1R3GB7ZBB8 358 aa11.99□□□□□ -0.49
UBE4B-210ENST00000488228 H3BNC9 293 aa11.99□□□□□ -0.49
UBE4B-210ENST00000488228 NRP1O14786 923 aa11.99□□□□□ -0.49
UBE4B-210ENST00000488228 PSMA7O14818 248 aa11.99□□□□□ -0.49
UBE4B-210ENST00000488228 IL18RAPO95256 599 aa11.99□□□□□ -0.49
UBE4B-210ENST00000488228 LDHAP00338 332 aaKnown RBP11.99□□□□□ -0.49
UBE4B-210ENST00000488228 IGFBP6P24592 240 aaPredicted RBP11.99□□□□□ -0.49
UBE4B-210ENST00000488228 DNAJB1P25685 340 aa11.99□□□□□ -0.49
UBE4B-210ENST00000488228 CLCNKBP51801 687 aa11.99□□□□□ -0.49
UBE4B-210ENST00000488228 CYP24A1Q07973 514 aa11.99□□□□□ -0.49
UBE4B-210ENST00000488228 STIM1Q13586 685 aa11.99□□□□□ -0.49
UBE4B-210ENST00000488228 ADGRE1Q14246 886 aa11.99□□□□□ -0.49
UBE4B-210ENST00000488228 HSP90AA2PQ14568 343 aaPredicted RBP11.99□□□□□ -0.49
UBE4B-210ENST00000488228 CEP135Q66GS9 1140 aa11.99□□□□□ -0.49
UBE4B-210ENST00000488228 RBM43Q6ZSC3 357 aaKnown RBP11.99□□□□□ -0.49
UBE4B-210ENST00000488228 C3orf58Q8NDZ4 430 aa11.99□□□□□ -0.49
UBE4B-210ENST00000488228 NELFBQ8WX92 580 aa11.99□□□□□ -0.49
UBE4B-210ENST00000488228 P2RX5Q93086 422 aa11.99□□□□□ -0.49
UBE4B-210ENST00000488228 IGSF21Q96ID5 467 aa11.99□□□□□ -0.49
UBE4B-210ENST00000488228 CDX2Q99626 313 aaPredicted RBP11.99□□□□□ -0.49
UBE4B-210ENST00000488228 PLVAPQ9BX97 442 aa11.99□□□□□ -0.49
UBE4B-210ENST00000488228 GTPBP4Q9BZE4 634 aaKnown RBP11.99□□□□□ -0.49
UBE4B-210ENST00000488228 PLEKHA5Q9HAU0 1116 aa11.99□□□□□ -0.49
UBE4B-210ENST00000488228 SLC38A7Q9NVC3 462 aa11.99□□□□□ -0.49
UBE4B-210ENST00000488228 DMAC2Q9NW81 257 aa11.99□□□□□ -0.49
UBE4B-210ENST00000488228 MTMR10Q9NXD2 777 aa11.99□□□□□ -0.49
UBE4B-210ENST00000488228 SPG21Q9NZD8 308 aa11.99□□□□□ -0.49
UBE4B-210ENST00000488228 PCDHGC5Q9Y5F6 944 aa11.99□□□□□ -0.49
UBE4B-210ENST00000488228 ZNF233A6NK53 670 aa11.98□□□□□ -0.49
UBE4B-210ENST00000488228 PODXLO00592 558 aa11.98□□□□□ -0.49
UBE4B-210ENST00000488228 PPEF2O14830 753 aa11.98□□□□□ -0.49
UBE4B-210ENST00000488228 RB1P06400 928 aa11.98□□□□□ -0.49
UBE4B-210ENST00000488228 STX17P56962 302 aa11.98□□□□□ -0.49
UBE4B-210ENST00000488228 TFAMQ00059 246 aaKnown RBP11.98□□□□□ -0.49
UBE4B-210ENST00000488228 PAK1Q13153 545 aa11.98□□□□□ -0.49
UBE4B-210ENST00000488228 EDRF1Q3B7T1 1238 aa11.98□□□□□ -0.49
UBE4B-210ENST00000488228 ANKRD40Q6AI12 368 aa11.98□□□□□ -0.49
UBE4B-210ENST00000488228 CENPPQ6IPU0 288 aa11.98□□□□□ -0.49
UBE4B-210ENST00000488228 SLC9A9Q8IVB4 645 aa11.98□□□□□ -0.49
UBE4B-210ENST00000488228 PLEKHO2Q8TD55 490 aa11.98□□□□□ -0.49
UBE4B-210ENST00000488228 CCDC127Q96BQ5 260 aa11.98□□□□□ -0.49
UBE4B-210ENST00000488228 TMEM169Q96HH4 297 aa11.98□□□□□ -0.49
UBE4B-210ENST00000488228 TSG101Q99816 390 aa11.98□□□□□ -0.49
UBE4B-210ENST00000488228 MTMR12Q9C0I1 747 aa11.98□□□□□ -0.49
UBE4B-210ENST00000488228 GZF1Q9H116 711 aaPredicted RBP11.98□□□□□ -0.49
UBE4B-210ENST00000488228 UBQLN1Q9UMX0 589 aaKnown RBP11.98□□□□□ -0.49
UBE4B-210ENST00000488228 FAN1Q9Y2M0 1017 aa11.98□□□□□ -0.49
UBE4B-210ENST00000488228 C2CD2Q9Y426 696 aa11.98□□□□□ -0.49
UBE4B-210ENST00000488228 EYSQ5T1H1 3165 aa11.98□□□□□ -0.49
UBE4B-210ENST00000488228 I3L4J1 428 aa11.97□□□□□ -0.49
UBE4B-210ENST00000488228 AKAP3O75969 853 aa11.97□□□□□ -0.49
UBE4B-210ENST00000488228 DLATP10515 647 aaKnown RBP11.97□□□□□ -0.49
UBE4B-210ENST00000488228 FOSL2P15408 326 aa11.97□□□□□ -0.49
UBE4B-210ENST00000488228 IGFBP4P22692 258 aa11.97□□□□□ -0.49
UBE4B-210ENST00000488228 CCNE1P24864 410 aa11.97□□□□□ -0.49
UBE4B-210ENST00000488228 IRS1P35568 1242 aa11.97□□□□□ -0.49
UBE4B-210ENST00000488228 NLRP12P59046 1061 aa11.97□□□□□ -0.49
UBE4B-210ENST00000488228 LRRC63Q05C16 580 aa11.97□□□□□ -0.49
UBE4B-210ENST00000488228 CAMK1Q14012 370 aa11.97□□□□□ -0.49
UBE4B-210ENST00000488228 ZBTB6Q15916 424 aa11.97□□□□□ -0.49
UBE4B-210ENST00000488228 NFIL3Q16649 462 aa11.97□□□□□ -0.49
UBE4B-210ENST00000488228 UPP1Q16831 310 aa11.97□□□□□ -0.49
UBE4B-210ENST00000488228 KLHL40Q2TBA0 621 aa11.97□□□□□ -0.49
UBE4B-210ENST00000488228 TTI2Q6NXR4 508 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms