RNA–Protein interactions for RNA: ENST00000488058.1

RNF38-208, Transcript of ring finger protein 38, humanhuman

TSL 3

Gene RNF38, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-208ENST00000488058 GTF2BQ00403 316 aa25.89■■□□□ 1.74
RNF38-208ENST00000488058 SLC10A6Q3KNW5 377 aa25.89■■□□□ 1.74
RNF38-208ENST00000488058 KCNN1Q92952 543 aa25.89■■□□□ 1.74
RNF38-208ENST00000488058 RIPOR3Q96MK2 946 aa25.89■■□□□ 1.74
RNF38-208ENST00000488058 C1QTNF1Q9BXJ1 281 aa25.89■■□□□ 1.74
RNF38-208ENST00000488058 MRPL44Q9H9J2 332 aaKnown RBP25.89■■□□□ 1.74
RNF38-208ENST00000488058 TSHZ2Q9NRE2 1034 aa25.89■■□□□ 1.74
RNF38-208ENST00000488058 TBC1D7Q9P0N9 293 aa25.89■■□□□ 1.74
RNF38-208ENST00000488058 LOC730098B7Z3J9 87 aa25.88■■□□□ 1.73
RNF38-208ENST00000488058 PI4K2BG5E9Z4 385 aa25.88■■□□□ 1.73
RNF38-208ENST00000488058 MEFVO15553 781 aaPredicted RBP25.88■■□□□ 1.73
RNF38-208ENST00000488058 PIGRP01833 764 aa25.88■■□□□ 1.73
RNF38-208ENST00000488058 CLTAP09496 248 aa25.88■■□□□ 1.73
RNF38-208ENST00000488058 SPATA31D3P0C874 917 aa25.88■■□□□ 1.73
RNF38-208ENST00000488058 KCNE1P15382 129 aa25.88■■□□□ 1.73
RNF38-208ENST00000488058 IGFBP6P24592 240 aaPredicted RBP25.88■■□□□ 1.73
RNF38-208ENST00000488058 TNFSF9P41273 254 aa25.88■■□□□ 1.73
RNF38-208ENST00000488058 MTHFRP42898 656 aa25.88■■□□□ 1.73
RNF38-208ENST00000488058 CREMQ03060 361 aa25.88■■□□□ 1.73
RNF38-208ENST00000488058 UPP1Q16831 310 aa25.88■■□□□ 1.73
RNF38-208ENST00000488058 SPATA31D4Q6ZUB0 917 aa25.88■■□□□ 1.73
RNF38-208ENST00000488058 RNF135Q8IUD6 432 aa25.88■■□□□ 1.73
RNF38-208ENST00000488058 MAP4K3Q8IVH8 894 aa25.88■■□□□ 1.73
RNF38-208ENST00000488058 STAMQ92783 540 aa25.88■■□□□ 1.73
RNF38-208ENST00000488058 C18orf25Q96B23 403 aaPredicted RBP25.88■■□□□ 1.73
RNF38-208ENST00000488058 DHX58Q96C10 678 aa25.88■■□□□ 1.73
RNF38-208ENST00000488058 DNAJC19Q96DA6 116 aa25.88■■□□□ 1.73
RNF38-208ENST00000488058 NECTIN4Q96NY8 510 aa25.88■■□□□ 1.73
RNF38-208ENST00000488058 MSTO1Q9BUK6 570 aa25.88■■□□□ 1.73
RNF38-208ENST00000488058 POMKQ9H5K3 350 aa25.88■■□□□ 1.73
RNF38-208ENST00000488058 VWA8A3KMH1 1905 aa25.87■■□□□ 1.73
RNF38-208ENST00000488058 TMEM189-UBE2V1I3L0A0 370 aa25.87■■□□□ 1.73
RNF38-208ENST00000488058 I3L4J1 428 aa25.87■■□□□ 1.73
RNF38-208ENST00000488058 PODXLO00592 558 aa25.87■■□□□ 1.73
RNF38-208ENST00000488058 GAP43P17677 238 aa25.87■■□□□ 1.73
RNF38-208ENST00000488058 BRCC3P46736 316 aa25.87■■□□□ 1.73
RNF38-208ENST00000488058 ME1P48163 572 aa25.87■■□□□ 1.73
RNF38-208ENST00000488058 DNM1Q05193 864 aaKnown RBP25.87■■□□□ 1.73
RNF38-208ENST00000488058 SPAG1Q07617 926 aa25.87■■□□□ 1.73
RNF38-208ENST00000488058 PSMD5Q16401 504 aa25.87■■□□□ 1.73
RNF38-208ENST00000488058 ATAT1Q5SQI0 421 aa25.87■■□□□ 1.73
RNF38-208ENST00000488058 ELMSAN1Q6PJG2 1045 aa25.87■■□□□ 1.73
RNF38-208ENST00000488058 SHC4Q6S5L8 630 aa25.87■■□□□ 1.73
RNF38-208ENST00000488058 C3orf58Q8NDZ4 430 aa25.87■■□□□ 1.73
RNF38-208ENST00000488058 FEZF2Q8TBJ5 459 aa25.87■■□□□ 1.73
RNF38-208ENST00000488058 KCNG4Q8TDN1 519 aa25.87■■□□□ 1.73
RNF38-208ENST00000488058 DDX27Q96GQ7 796 aaKnown RBP25.87■■□□□ 1.73
RNF38-208ENST00000488058 FNIP2Q9P278 1114 aa25.87■■□□□ 1.73
RNF38-208ENST00000488058 MUTYHQ9UIF7 546 aa25.87■■□□□ 1.73
RNF38-208ENST00000488058 FAM86C2PA6NEL3 165 aa25.86■■□□□ 1.73
RNF38-208ENST00000488058 OGTO15294 1046 aa25.86■■□□□ 1.73
RNF38-208ENST00000488058 DCXO43602 365 aa25.86■■□□□ 1.73
RNF38-208ENST00000488058 ALADP13716 330 aa25.86■■□□□ 1.73
RNF38-208ENST00000488058 PPP2R3AQ06190 1150 aa25.86■■□□□ 1.73
RNF38-208ENST00000488058 HERC4Q5GLZ8 1057 aaPredicted RBP25.86■■□□□ 1.73
RNF38-208ENST00000488058 ZBTB41Q5SVQ8 909 aa25.86■■□□□ 1.73
RNF38-208ENST00000488058 SLC39A4Q6P5W5 647 aa25.86■■□□□ 1.73
RNF38-208ENST00000488058 PDZRN4Q6ZMN7 1036 aaPredicted RBP25.86■■□□□ 1.73
RNF38-208ENST00000488058 ZNF720Q7Z2F6 126 aa25.86■■□□□ 1.73
RNF38-208ENST00000488058 GPR65Q8IYL9 337 aa25.86■■□□□ 1.73
RNF38-208ENST00000488058 PIK3R5Q8WYR1 880 aa25.86■■□□□ 1.73
RNF38-208ENST00000488058 FAM212AQ96EL1 285 aa25.86■■□□□ 1.73
RNF38-208ENST00000488058 SEL1LQ9UBV2 794 aa25.86■■□□□ 1.73
RNF38-208ENST00000488058 CFAP45Q9UL16 551 aa25.86■■□□□ 1.73
RNF38-208ENST00000488058 ANKRD63C9JTQ0 380 aa25.85■■□□□ 1.73
RNF38-208ENST00000488058 TRAPPC3O43617 180 aa25.85■■□□□ 1.73
RNF38-208ENST00000488058 GCNT3O95395 438 aa25.85■■□□□ 1.73
RNF38-208ENST00000488058 KYAT1Q16773 422 aa25.85■■□□□ 1.73
RNF38-208ENST00000488058 LNX1Q8TBB1 728 aaPredicted RBP25.85■■□□□ 1.73
RNF38-208ENST00000488058 KIF12Q96FN5 646 aa25.85■■□□□ 1.73
RNF38-208ENST00000488058 ST6GALNAC4Q9H4F1 302 aa25.85■■□□□ 1.73
RNF38-208ENST00000488058 RPF1Q9H9Y2 349 aaKnown RBP25.85■■□□□ 1.73
RNF38-208ENST00000488058 PANK4Q9NVE7 773 aa25.85■■□□□ 1.73
RNF38-208ENST00000488058 TUBGCP4Q9UGJ1 667 aa25.85■■□□□ 1.73
RNF38-208ENST00000488058 DPP7Q9UHL4 492 aa25.85■■□□□ 1.73
RNF38-208ENST00000488058 NUB1Q9Y5A7 615 aa25.85■■□□□ 1.73
RNF38-208ENST00000488058 BDP1A6H8Y1 2624 aa25.84■■□□□ 1.73
RNF38-208ENST00000488058 A0A0B4J269 797 aa25.84■■□□□ 1.73
RNF38-208ENST00000488058 TISP43B9A030 160 aa25.84■■□□□ 1.73
RNF38-208ENST00000488058 TGM5O43548 720 aa25.84■■□□□ 1.73
RNF38-208ENST00000488058 ATL3Q6DD88 541 aa25.84■■□□□ 1.73
RNF38-208ENST00000488058 PDXDC1Q6P996 788 aa25.84■■□□□ 1.73
RNF38-208ENST00000488058 CD300LGQ6UXG3 332 aa25.84■■□□□ 1.73
RNF38-208ENST00000488058 HVCN1Q96D96 273 aa25.84■■□□□ 1.73
RNF38-208ENST00000488058 IKZF4Q9H2S9 585 aa25.84■■□□□ 1.73
RNF38-208ENST00000488058 PLEKHA5Q9HAU0 1116 aa25.84■■□□□ 1.73
RNF38-208ENST00000488058 PCDHA7Q9UN72 937 aa25.84■■□□□ 1.73
RNF38-208ENST00000488058 MTCL1Q9Y4B5 1905 aaKnown RBP25.83■■□□□ 1.73
RNF38-208ENST00000488058 FGFR3P22607 806 aa25.83■■□□□ 1.73
RNF38-208ENST00000488058 TKTP29401 623 aaKnown RBP25.83■■□□□ 1.73
RNF38-208ENST00000488058 E2F4Q16254 413 aa25.83■■□□□ 1.73
RNF38-208ENST00000488058 AXDND1Q5T1B0 1012 aaPredicted RBP25.83■■□□□ 1.73
RNF38-208ENST00000488058 ADALQ6DHV7 355 aa25.83■■□□□ 1.73
RNF38-208ENST00000488058 GPR149Q86SP6 731 aa25.83■■□□□ 1.73
RNF38-208ENST00000488058 CLSTN3Q9BQT9 956 aa25.83■■□□□ 1.73
RNF38-208ENST00000488058 LRRC27Q9C0I9 530 aa25.83■■□□□ 1.73
RNF38-208ENST00000488058 TNMDQ9H2S6 317 aa25.83■■□□□ 1.73
RNF38-208ENST00000488058 FAM13BQ9NYF5 915 aa25.83■■□□□ 1.73
RNF38-208ENST00000488058 NR2E1Q9Y466 385 aa25.83■■□□□ 1.73
RNF38-208ENST00000488058 MUC3AQ02505 3323 aa25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms